ERR5865203
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351658
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10380063
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11243579
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865777
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR228019
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR403242
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR229931
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR24709897
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR117461
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067718
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR2516949
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR234608
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234613
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
ERR234626
|
MDR-TB
|
lineage2.2.1;lineage4.2.1.1
|
None
|
ERR067618
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5864654
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3794505
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866463
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234666
|
MDR-TB
|
lineage2.2.1;lineage4
|
ru
|
ERR108489
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6485145
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067583
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR13290438
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911024
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7911377
|
MDR-TB
|
lineage2.2.1
|
us
|
SRR6353887
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR019873
|
RR-TB
|
lineage2.2.1
|
None
|
SRR7655785
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865788
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133839
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5864818
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866067
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067758
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144590
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144597
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6484937
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR158613
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144617
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR553247_ERR553246
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403271
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403290
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18911993
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR144562
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11083017
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR019564
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6807673
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR108475
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR108491
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144632
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865753
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043414
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR108484
|
MDR-TB
|
lineage2.2.1
|
ru
|
SAMEA2535243
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR144591
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR158586
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR227993
|
MDR-TB
|
lineage2.2.1;lineage4.2.1
|
None
|
SRR24256109
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1023400
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067739
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR403303
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403266
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827649
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403240
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865437
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067587
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR4828054
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137226
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827803
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR550907
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR108507
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR9286037
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7653017
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11081734
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133902
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR228043
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR24710111
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23861775
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067765
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865752
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR117460
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11773823
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2843540
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3639769
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067704
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SRR6256984
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR227978
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR229918
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865405
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864816
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1144810
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7653027
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR144611
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR228017
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR5153228
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133959
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865406
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067660
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133910
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5865970
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866476
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864655
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28888082
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28498565
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11773832
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351408
|
Pre-XDR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR23310860
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR234633
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5865724
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11773836
|
MDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
ERR403313
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827570
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24709905
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29017064
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR108473
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR28498720
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11773807
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR067622
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144633
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR2199799
|
MDR-TB
|
lineage2.2.1
|
de
|
SRR13232739
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715062
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16088518
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29016919
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4821385
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR067619
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR067741
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR10762280
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11798558
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16088109
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866574
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28239840
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067654
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR29539793
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR230008
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133848
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR144548
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144615
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR10380248
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR027467
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11773812
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067652
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6353886
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11044291
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6831708
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR144628
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR229980
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR4829853
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133915
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5864683
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR230009
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR019557
|
RR-TB
|
lineage2.2.1
|
None
|
ERR137203
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067656
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR29539642
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6256992
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284249
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR108503
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR13250071
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR13232760
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234565
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR1035027
|
MDR-TB
|
lineage2.2.1
|
za
|
SRR18715037
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864815
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232455
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865775
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403282
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
ERR137272
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6256985
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR13284694
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403228
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29538982
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR550908_ERR550906_ERR550907
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29539591
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02414916
|
MDR-TB
|
lineage2.2.1
|
se
|
ERR067623
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5866207
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137281
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144575
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR158611
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5866197
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866393
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR067720
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR133972
|
MDR-TB
|
lineage2.2.1;lineage4.8
|
None
|
ERR1665405
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864651
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864682
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865838
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14801645
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133816
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11243545
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133908
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SRR14781907
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR229922
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR13284459
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137220
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144554
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR550837
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR158576
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133806
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR403273
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133866
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR24673553
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137275
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR067620
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067761
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5866573
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR017799
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11043637
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29539164
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865776
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8774359
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133827
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133843
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR551383
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866158
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232735
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043123
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133853
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR137222
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11081365
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864687
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29274135
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR144619
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR403316
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067576
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR108438
|
MDR-TB
|
lineage2.2.1;lineage4.2.1;lineage4.3.3
|
None
|
ERR108454
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR4827935
|
MDR-TB
|
lineage2.2.1;lineage5
|
None
|
ERR5866475
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137211
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR28240211
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067643
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067630
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6832241
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11082651
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR108502
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144551
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR229946
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR28646099
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR5864685
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR228064
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5866462
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403305
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866159
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067673
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5864684
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11069034
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067611
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR5153336
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067717
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SRR28714181
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28706407
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28888052
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR229924
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR29539129
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29539209
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284159
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24709923
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR229984
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR234596
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR234609
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865997
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10397138
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11033719
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232612
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864686
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866541
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7516305
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865234
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865778
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067635
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR108462
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133953
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR2510881
|
MDR-TB
|
lineage2.2.1
|
it
|
ERR11773802
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28239619
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR228054
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR227995
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR18715463
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13292566
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR027458
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR228061
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234623
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR11662461
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7517822
|
Pre-XDR-TB
|
lineage2.2.1
|
ch
|
SRR24710030
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284234
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865435
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR228050
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11043209
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234598
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR067651
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067613
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5864652
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865837
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137223
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5865233
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28888083
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR234641
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SRR29539224
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR137230
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133944
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133886
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR158590
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR117470
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067621
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6785498
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290440
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR144574
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR019559
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR184607
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR10397213
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR229998
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR24828598
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR067628
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067687
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR137260
|
MDR-TB
|
lineage2.2.1
|
ru
|
SAMEA2533554
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR133906
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR23861879
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28239932
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR144620
|
MDR-TB
|
lineage2.2.1;lineage4
|
ru
|
ERR13284220
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067653
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR108422
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
ru
|
ERR5865205
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865404
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137237
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234568
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR017795
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11243544
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866195
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2864286
|
MDR-TB
|
lineage2.2.1
|
pt
|
ERR234560
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5866157
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24709893
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR227987
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR14801870
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6257022
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR234590
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR144553
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234618
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5864650
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234571
|
MDR-TB
|
lineage2.2.1;lineage4.4.1.1
|
None
|
SRR28888050
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR2516822
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR11043896
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9119681
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865825
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR228046
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6257082
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6831810
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR133845
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR234595
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR29341517
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7910936
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351390
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR137204
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5866196
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067710
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133885
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133931
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR998861
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13292280
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067742
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067750
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR067762
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865750
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137225
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865751
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5535719
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR3639795
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR137210
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11081278
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865787
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR550838_ERR550837
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5761430
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801543
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14802147
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR027455
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5866391
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10808572
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR11043378
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR117453
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR11043274
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234615
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR11081600
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866447
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR484733
|
MDR-TB
|
lineage2.2.1;lineage4.8
|
None
|
ERR228020
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11243546
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8774358
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18911238
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28467049
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR24255905
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR144549
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144593
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR11773793
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29126263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827933
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR067754
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133831
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865836
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866208
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866540
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1146417
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4822407
|
MDR-TB
|
lineage2.2.1
|
ua
|
ERR13264934
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR229960
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR229994
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234570
|
MDR-TB
|
lineage2.2.1;lineage4
|
ru
|
ERR403301
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6832638
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11081978
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11082348
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR234563
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234606
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR6257030
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR158597
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865232
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4553468
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR5153608
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6353884
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28888071
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR29356710
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR027450
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR027453
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.9
|
None
|
ERR133826
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR2517099
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR2184442
|
MDR-TB
|
lineage4.3.4.1
|
pe
|
ERR133895
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234602
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR7516304
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23310823
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284314
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067709
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067715
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5864653
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133854
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR067721
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR550838
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234622
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865723
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234653
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SAMEA2533511
|
MDR-TB
|
lineage2.2.1
|
uz
|
SRR23310936
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11068995
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR019869
|
RR-TB
|
lineage2.2.1
|
None
|
ERR026637
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6832573
|
Pre-XDR-TB
|
lineage2.2.1;lineage4
|
None
|
ERR067649
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067698
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR227996
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SRR24256211
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137283
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144636
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR228013
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234574
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR13273323
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865403
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6257104
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11050145
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234698
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144600
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5865204
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290441
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR067663
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR133957
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144556
|
MDR-TB
|
lineage2.2.1;lineage4
|
ru
|
ERR553247
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR229923
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11043418
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403218
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR228003
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR13106401
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1665404
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR133805
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11081378
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8774581
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR133860
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR158585
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR403284
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR158592
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234660
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR3639791
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133919
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11043640
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2677407
|
MDR-TB
|
lineage2.2.1
|
de
|
SRR28888080
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR067592
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR067711
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR3275831
|
MDR-TB
|
lineage2.2.1
|
nl
|
ERR5865992
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864688
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866392
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR229962
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR11081599
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR108467
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865826
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234593
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR144543
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SRR28888081
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR067695
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234576
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR5866209
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7910955
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4829378
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
ERR228012
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR553246
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR019575
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR14801647
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR228042
|
MDR-TB
|
lineage2.2.1;lineage4
|
ru
|
ERR11081254
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR403250
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR108493
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR108458
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR137269
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR137277
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR229933
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR229966
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR21690725
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24255937
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864817
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2199854
|
MDR-TB
|
lineage2.2.1
|
de
|
ERR13284605
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830593
|
MDR-TB
|
lineage2.2.1
|
tm
|
ERR117468
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR23339949
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR144561
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234637
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR137262
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR4828411
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR16115884
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865402
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866448
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24256281
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133930
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR2199853
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866066
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133868
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR28240155
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR108436
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR228029
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR11050157
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR229916
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR067662
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR5153829
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9286038
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR234621
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR234628
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR10397190
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR137246
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5865436
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1162881
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2515732
|
RR-TB
|
lineage4.3.2.1
|
za
|
SRR6807682
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR027463
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715339
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|