Rv0667 - p.His445Cys
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
14 RR-TB
0 HR-TB
224 MDR-TB
34 Pre-XDR-TB
5 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.2 | 7 |
| lineage4.5 | 6 |
| lineage2.2.1 | 34 |
| lineage4.1.2.1 | 12 |
| lineage1.2.2.2 | 5 |
| lineage4.1.4 | 1 |
| lineage4.3.4.1 | 15 |
| lineage1.2.2.1 | 13 |
| lineage3.1.1 | 5 |
| lineage4.4.1.1 | 5 |
| lineage4.3.4.2 | 9 |
| lineage4.3.3 | 26 |
| lineage4.4.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.8 | 17 |
| lineage4.9 | 4 |
| lineage4.6.1.1 | 1 |
| lineage1.2.2.1;lineage4.8.1 | 1 |
| lineage1.2.1.2.1 | 4 |
| lineage4.8.1 | 10 |
| lineage4.1.1.3 | 4 |
| lineage1.2.1.2 | 4 |
| lineage2.2.2 | 11 |
| lineage3.1.2 | 2 |
| lineage4.2.1.1 | 2 |
| lineage1.1.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.2.2.2 | 21 |
| lineage4.1.2 | 5 |
| lineage5.3 | 1 |
| lineage3 | 5 |
| lineage4.2.2 | 6 |
| lineage4.3.2 | 5 |
| lineage2.2.1.1 | 4 |
| lineage4.6.1.2 | 1 |
| lineage1.1.3 | 1 |
| lineage2.2.1;lineage4.5 | 2 |
| lineage4.3.2.1 | 1 |
| lineage1.2.2.1;lineage2.2.1 | 1 |
| lineage4.1.1 | 3 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.3.3 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.2.1 | 3 |
| lineage1.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4 | 3 |
| lineage4.3.2;lineage4.3.3 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 277 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002895 | MDR-TB | lineage4.4.2 | None | ERR2510492 | MDR-TB | lineage4.5 | None | ERR551196 | MDR-TB | lineage2.2.1 | de | SRR7341672 | MDR-TB | lineage4.1.2.1 | ro | ERR2517082 | MDR-TB | lineage1.2.2.2 | gb | ERR2516939 | MDR-TB | lineage4.5 | gb | ERR2516434 | MDR-TB | lineage4.1.4 | pe | ERR2516699 | Pre-XDR-TB | lineage4.3.4.1 | pe | ERR2513987 | MDR-TB | lineage2.2.1 | gb | ERR2514591 | MDR-TB | lineage2.2.1 | gb | ERR2516077 | MDR-TB | lineage1.2.2.1 | za | SRR1173650 | MDR-TB | lineage3.1.1 | None | SRR27107261 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR28394218 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR5865542 | MDR-TB | lineage4.3.3 | None | ERR10680143 | MDR-TB | lineage2.2.1 | None | SRR29017338 | MDR-TB | lineage4.4.1 | None | SRR23691407 | MDR-TB | lineage2.2.1 | None | ERR11489042 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR5865576 | MDR-TB | lineage2.2.1 | None | ERR4800603 | RR-TB | lineage4.8 | None | SRR15316238 | MDR-TB | lineage4.4.2 | None | SRR9224960 | MDR-TB | lineage4.3.4.1 | None | SRR28393537 | MDR-TB | lineage4.3.4.2 | None | SRR8791301 | MDR-TB | lineage4.9 | None | ERR4796969 | Pre-XDR-TB | lineage4.8 | in | ERR6358866 | MDR-TB | lineage4.6.1.1 | None | ERR13286158 | MDR-TB | lineage1.2.2.1 | None | ERR10748543 | MDR-TB | lineage1.2.2.1;lineage4.8.1 | None | ERR13260020 | MDR-TB | lineage1.2.1.2.1 | None | SRR24673518 | MDR-TB | lineage4.3.3 | None | SRR10315662 | MDR-TB | lineage4.8.1 | None | SRR9971189 | Pre-XDR-TB | lineage4.8 | None | SRR18665464 | MDR-TB | lineage4.1.1.3 | None | SRR21576720 | MDR-TB | lineage1.2.1.2 | None | SRR29093912 | MDR-TB | lineage2.2.2 | None | SRR22424775 | MDR-TB | lineage3.1.2 | None | ERR9806700 | MDR-TB | lineage4.3.3 | None | ERR13284350 | MDR-TB | lineage4.2.1.1 | None | SRR11662395 | MDR-TB | lineage1.1.1 | None | ERR13284260 | MDR-TB | lineage2.2.1 | None | SRR29017101 | MDR-TB | lineage1.1.3.1 | None | SRR25515052 | MDR-TB | lineage4.4.2 | None | SRR10808791 | MDR-TB | lineage2.2.2 | None | SRR1169250 | MDR-TB | lineage4.8.1 | None | ERR4011966 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR11081404 | MDR-TB | lineage4.8 | None | SRR1173542 | MDR-TB | lineage4.1.2 | None | ERR11082677 | MDR-TB | lineage4.8 | None | ERR7737855 | MDR-TB | lineage4.2.2.2 | None | ERR13260938 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR9971084 | MDR-TB | lineage4.8.1 | None | SRR5485407 | RR-TB | lineage4.9 | None | ERR1035287 | MDR-TB | lineage4.3.3 | br | SRR29273973 | MDR-TB | lineage4.1.2.1 | None | ERR4192403 | RR-TB | lineage5.3 | None | ERR7737840 | MDR-TB | lineage4.2.2.2 | None | ERR4800137 | MDR-TB | lineage3.1.2 | None | SRR29772406 | MDR-TB | lineage3 | None | SRR7516438 | MDR-TB | lineage4.3.3 | None | ERR4276870 | MDR-TB | lineage4.2.2.2 | None | SRR28393375 | MDR-TB | lineage4.3.4.1 | None | ERR5864999 | MDR-TB | lineage4.3.3 | None | ERR5866588 | MDR-TB | lineage4.3.3 | None | ERR5865000 | MDR-TB | lineage4.3.3 | None | ERR5865004 | MDR-TB | lineage4.3.3 | None | SRR1165654 | MDR-TB | lineage4.8.1 | None | SRR29051499 | MDR-TB | lineage4.3.4.1 | None | SRR13583507 | MDR-TB | lineage4.3.4.2 | None | SRR3142013 | MDR-TB | lineage4.2.2.2 | None | ERR2510413 | Pre-XDR-TB | lineage4.5 | pk | SRR29914410 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260197 | MDR-TB | lineage4.3.4.2 | None | SRR28385883 | MDR-TB | lineage2.2.2 | None | ERR4799107 | XDR-TB | lineage4.8 | in | ERR9119639 | MDR-TB | lineage4.8 | None | ERR4799996 | MDR-TB | lineage4.8 | in | SRR29274030 | MDR-TB | lineage4.3.3 | None | ERR4011962 | MDR-TB | lineage4.2.2.2 | None | SRR10305981 | MDR-TB | lineage4.2.2 | None | SRR23339962 | MDR-TB | lineage4.8 | None | ERR9125287 | RR-TB | lineage1.2.1.2.1 | None | SAMN02403582 | MDR-TB | lineage4.8.1 | za | ERR13191069 | MDR-TB | lineage2.2.2 | None | SRR29093950 | Pre-XDR-TB | lineage2.2.2 | None | ERR5865541 | MDR-TB | lineage4.3.3 | None | SRR13583453 | MDR-TB | lineage4.3.4.1 | None | SRR28393644 | MDR-TB | lineage4.3.2 | None | SRR28393377 | MDR-TB | lineage4.3.4.1 | None | ERR4828900 | MDR-TB | lineage4.1.2.1 | None | ERR11049457 | MDR-TB | lineage4.1.2.1 | None | ERR7737809 | MDR-TB | lineage2.2.1 | None | ERR751607 | MDR-TB | lineage4.3.2 | pe | ERR751382 | MDR-TB | lineage4.3.4.1 | pe | ERR4830496 | RR-TB | lineage2.2.1 | za | ERR4832021 | MDR-TB | lineage2.2.1.1 | vn | SRR12142367 | MDR-TB | lineage2.2.1 | None | ERR11067266 | MDR-TB | lineage4.3.3 | None | ERR038740 | MDR-TB | lineage4.6.1.2 | ug | SRR1710108 | MDR-TB | lineage2.2.1 | cn | ERR2517069 | MDR-TB | lineage4.2.2.2 | gb | ERR2516914 | MDR-TB | lineage4.2.2.2 | gb | ERR2517088 | MDR-TB | lineage4.1.2.1 | gb | ERR2516735 | MDR-TB | lineage4.4.1.1 | nl | ERR2516426 | MDR-TB | lineage4.1.2.1 | nl | ERR2516602 | MDR-TB | lineage4.3.2 | pe | ERR2516441 | MDR-TB | lineage4.3.2 | pe | ERR2510138 | MDR-TB | lineage4.3.4.1 | pe | SRR5709782 | RR-TB | lineage1.1.3 | th | SRR6824499 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824668 | MDR-TB | lineage2.2.1;lineage4.5 | cn | SRR6824522 | MDR-TB | lineage2.2.2 | cn | SRR6824409 | MDR-TB | lineage4.2.2 | cn | SRR11349139 | MDR-TB | lineage4.8.1 | None | SRR7069953 | MDR-TB | lineage2.2.1 | None | ERR3077997 | MDR-TB | lineage4.3.4.2.1 | None | SRR28385877 | MDR-TB | lineage2.2.2 | None | SRR29080982 | MDR-TB | lineage1.2.1.2.1 | None | SRR29055620 | MDR-TB | lineage1.2.2.1 | None | SRR29055937 | MDR-TB | lineage1.2.2.1 | None | SRR29056146 | MDR-TB | lineage1.2.2.1 | None | ERR13285006 | MDR-TB | lineage2.2.1 | None | ERR10112841 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR15316336 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR9992891 | XDR-TB | lineage1.2.2.1 | None | SRR10315661 | MDR-TB | lineage4.8.1 | None | ERR11082303 | MDR-TB | lineage4.3.3 | None | ERR7737645 | MDR-TB | lineage4.2.2.2 | None | ERR4553990 | Pre-XDR-TB | lineage4.9 | None | ERR9992921 | XDR-TB | lineage1.2.2.1 | None | SRR13583500 | MDR-TB | lineage4.3.4.1 | None | SRR11662136 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10748243 | MDR-TB | lineage1.2.2.1;lineage2.2.1 | None | ERR2184282 | RR-TB | lineage4.1.1 | pe | ERR7732708 | MDR-TB | lineage4.2.2.2 | None | SRR21276914 | MDR-TB | lineage2.2.1 | None | ERR13254217 | MDR-TB | lineage1.2.1.2 | None | SRR1165297 | MDR-TB | lineage4.1.2 | None | ERR10680125 | MDR-TB | lineage4.1.2.1 | None | ERR13284408 | MDR-TB | lineage4.8 | None | SRR1723437 | MDR-TB | lineage2.2.2 | cn | SRR1724011 | MDR-TB | lineage4.2.2 | cn | SRR1724010 | MDR-TB | lineage4.2.2 | cn | ERR2179671 | MDR-TB | lineage4.2.2 | cn | ERR2179672 | MDR-TB | lineage4.2.2 | cn | SRR26936968 | MDR-TB | lineage2.2.1 | None | SRR16058304 | RR-TB | lineage1.2.1.2.1 | None | ERR5864998 | MDR-TB | lineage4.3.3 | None | SRR21746992 | MDR-TB | lineage2.2.1 | None | ERR13290930 | MDR-TB | lineage2.2.1 | None | SRR29093645 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR29539125 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR2027285 | MDR-TB | lineage4.6.2.2 | None | SRR29051587 | MDR-TB | lineage4.3.4.1 | None | SRR29093667 | MDR-TB | lineage4.1.1.3 | None | SRR9971030 | RR-TB | lineage2.2.1 | None | SRR29273635 | MDR-TB | lineage4.1.2.1 | None | SRR29016857 | MDR-TB | lineage1.1.3.3 | None | ERR7737698 | MDR-TB | lineage1.1.1.1 | None | SRR1173820 | MDR-TB | lineage4.1.2 | None | SRR28351302 | MDR-TB | lineage4.2.1 | None | SRR29055618 | MDR-TB | lineage4.3.4.2.1 | None | SRR29289410 | Pre-XDR-TB | lineage4.5 | None | SRR29772509 | MDR-TB | lineage1.2.2.2 | None | ERR9992680 | XDR-TB | lineage1.2.2.1 | None | ERR12268368 | MDR-TB | lineage2.2.1;lineage4.5 | None | SRR29051253 | MDR-TB | lineage4.3.4.1 | None | SRR29017097 | MDR-TB | lineage1.1.3.1 | None | SRR20139557 | MDR-TB | lineage4.8 | None | ERR4797857 | MDR-TB | lineage1.2.2.2 | in | SRR27107259 | MDR-TB | lineage4.4.1.1 | None | ERR4799000 | MDR-TB | lineage3 | in | SRR16088223 | MDR-TB | lineage4.3.3 | None | SRR22528522 | MDR-TB | lineage4.1.1 | None | SRR29273890 | Pre-XDR-TB | lineage4.3.3 | None | SRR29017259 | Pre-XDR-TB | lineage4.9 | None | ERR5865944 | MDR-TB | lineage4.3.3 | None | SAMN02403637 | MDR-TB | lineage4.1.2 | za | ERR752156 | MDR-TB | lineage2.2.1 | th | SRR25827800 | MDR-TB | lineage1.1.2 | None | ERR4811944 | MDR-TB | lineage4.1.2.1 | pe | SRR28394215 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR28385878 | MDR-TB | lineage2.2.2 | None | ERR4829755 | MDR-TB | lineage4.1.2.1 | it | ERR4813890 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4813977 | MDR-TB | lineage4.8 | br | SRR25207302 | MDR-TB | lineage4.5 | None | ERR4830526 | MDR-TB | lineage4.8.1 | za | ERR4830802 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR4830793 | MDR-TB | lineage4.2.2.2 | et | ERR4830821 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR4830840 | MDR-TB | lineage4.2.2.2 | et | ERR4830785 | Pre-XDR-TB | lineage4.2.2.2 | et | SRR13583400 | MDR-TB | lineage4.3.4.1 | None | SRR15014738 | MDR-TB | lineage3 | None | SRR21276969 | MDR-TB | lineage4.4.2 | None | ERR13276297 | MDR-TB | lineage4.8 | None | SRR28170701 | MDR-TB | lineage4.1.1.3 | None | SRR6480519 | MDR-TB | lineage2.2.2 | None | ERR137250 | MDR-TB | lineage4.2.1 | ru | ERR11080862 | MDR-TB | lineage4.2.1.1 | None | SRR10808359 | RR-TB | lineage4.1.1 | None | SRR10315468 | RR-TB | lineage2.2.1 | None | SAMN02403517 | MDR-TB | lineage3.1.1 | za | SRR12416828 | MDR-TB | lineage4.4.1.2 | None | ERR11081014 | MDR-TB | lineage2.2.1 | None | SRR27069458 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167303 | MDR-TB | lineage4.1.2 | None | SRR27107248 | MDR-TB | lineage4.4.1.1 | None | SRR1167347 | MDR-TB | lineage4.8.1 | None | ERR2653221 | MDR-TB | lineage4.3.2 | None | ERR2515643 | MDR-TB | lineage1.2.2.1 | za | ERR10748190 | MDR-TB | lineage1.2.2.1 | None | ERR10748182 | MDR-TB | lineage1.2.2.1 | None | ERR10748217 | MDR-TB | lineage1.2.2.1 | None | DRR130082 | MDR-TB | lineage1.2.1.2 | None | SRR25515247 | MDR-TB | lineage4.4.2 | None | SRR10040424 | Pre-XDR-TB | lineage4.4.2 | None | ERR4813713 | RR-TB | lineage4.3.4.2 | None | SRR16915753 | MDR-TB | lineage4.3.4.1 | None | ERR10680127 | MDR-TB | lineage2.2.1 | None | ERR7737640 | MDR-TB | lineage4.3.4.2.1 | None | SRR15315933 | MDR-TB | lineage2.2.1 | None | SRR28044952 | MDR-TB | lineage3 | None | SRR19241768 | MDR-TB | lineage4.1.2.1 | None | SRR29017003 | MDR-TB | lineage4.3.4.1 | None | SRR29093281 | MDR-TB | lineage4.2.2.2 | None | SRR29093641 | MDR-TB | lineage4.2.2.2 | None | SRR1167252 | MDR-TB | lineage3.1.1 | None | SRR7069290 | MDR-TB | lineage2.2.1 | None | SRR29274082 | Pre-XDR-TB | lineage4.3.3 | None | ERR11067829 | MDR-TB | lineage4.3.3 | None | ERR4872247 | MDR-TB | lineage4.8 | None | SRR29093988 | MDR-TB | lineage4.2.2.2 | None | ERR5865003 | MDR-TB | lineage4.3.3 | None | SRR10040547 | MDR-TB | lineage4.4.2 | None | ERR7737722 | MDR-TB | lineage4.2.2.2 | None | SRR10040461 | MDR-TB | lineage2.2.1 | None | SRR29017350 | Pre-XDR-TB | lineage4.3.3 | None | SRR29081583 | MDR-TB | lineage4 | None | ERR13266987 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR25827295 | XDR-TB | lineage4.8 | None | ERR5865001 | MDR-TB | lineage4.3.3 | None | SRR1165230 | MDR-TB | lineage3.1.1 | None | SRR1169315 | MDR-TB | lineage4.8.1 | None | SRR26331599 | MDR-TB | lineage4.4.1.1 | None | ERR10610187 | MDR-TB | lineage4.3.3 | None | ERR10680105 | MDR-TB | lineage2.2.1 | None | ERR13285058 | MDR-TB | lineage4.3.3 | None | SRR29051591 | MDR-TB | lineage4.3.4.2 | None | ERR2516508 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29055677 | MDR-TB | lineage1.2.2.1 | None | SRR29017009 | MDR-TB | lineage2.2.2 | None | ERR4553411 | MDR-TB | lineage1.1.3.3 | None | ERR13261156 | Pre-XDR-TB | lineage3 | None | ERR11081950 | MDR-TB | lineage4.8 | None | ERR2510312 | MDR-TB | lineage4.5 | pk | SRR24256092 | MDR-TB | lineage4.2.1 | None | SRR29055409 | MDR-TB | lineage4.1.1.3 | None | ERR4827611 | MDR-TB | lineage2.2.1 | None | ERR13284963 | MDR-TB | lineage4.8 | None | SRR1173386 | MDR-TB | lineage3.1.1 | None | ERR5865002 | MDR-TB | lineage4.3.3 | None | SRR10315467 | RR-TB | lineage2.2.1 | None | SRR28393586 | MDR-TB | lineage4.3.2;lineage4.3.3 | None | SRR29081588 | MDR-TB | lineage4 | None | ERR4822362 | MDR-TB | lineage1.2.1.2 | None | SRR7592332 | MDR-TB | lineage4.7 | None | ERR4830167 | MDR-TB | lineage2.2.1 | None | ERR10680094 | MDR-TB | lineage4.1.2.1 | None | ERR3273221 | RR-TB | lineage2.2.1.1 | None | ERR4810925 | Pre-XDR-TB | lineage4 | cn | ERR5865577 | MDR-TB | lineage2.2.1 | None | ERR4813790 | MDR-TB | lineage4.3.4.2 | br | ERR4831241 | MDR-TB | lineage4.2.2.2 | de | ERR4831649 | MDR-TB | lineage2.2.1 | None | SRR5153089 | MDR-TB | lineage4.3.3 | None |
|---|
