lineage | Count |
---|---|
lineage2.2.1 | 144 |
lineage4.3.2.1 | 9 |
lineage4.3.4.2.1 | 7 |
lineage3.1.2 | 1 |
lineage2.2.1;lineage4.1.2.1 | 1 |
lineage3;lineage4.1.1.3 | 1 |
lineage4 | 3 |
lineage2.2.2 | 1 |
lineage4.8 | 2 |
lineage3 | 7 |
lineage4.5 | 1 |
lineage1.1.2 | 2 |
lineage2.2.1.1 | 3 |
lineage4.1.2.1 | 2 |
lineage2.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 187 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR11488330 | MDR-TB | lineage2.2.1 | None |
SRR12062509 | Pre-XDR-TB | lineage2.2.1 | None |
SAMN02419610 | Pre-XDR-TB | lineage2.2.1 | by |
ERR5987276 | RR-TB | lineage4.3.2.1 | None |
ERR11488686 | MDR-TB | lineage2.2.1 | None |
ERR13290792 | MDR-TB | lineage2.2.1 | None |
SRR6458410 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9120064 | MDR-TB | lineage4.3.4.2.1 | None |
ERR8025602 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5758353 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29772642 | MDR-TB | lineage3.1.2 | None |
ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None |
SRR15316019 | MDR-TB | lineage2.2.1 | None |
SRR15465773 | Pre-XDR-TB | lineage3;lineage4.1.1.3 | None |
ERR11488556 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2515910 | Pre-XDR-TB | lineage2.2.1 | za |
SRR29273803 | MDR-TB | lineage4 | None |
ERR4810998 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR11662623 | MDR-TB | lineage2.2.1 | None |
ERR8665534 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9120065 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488491 | MDR-TB | lineage2.2.1 | None |
SRR20969922 | Pre-XDR-TB | lineage2.2.2 | None |
ERR7911583 | Pre-XDR-TB | lineage2.2.1 | za |
ERR8025445 | Pre-XDR-TB | lineage2.2.1 | None |
SAMN02419564 | Pre-XDR-TB | lineage2.2.1 | by |
SRR10040309 | Pre-XDR-TB | lineage2.2.1 | None |
SAMEA2533922 | MDR-TB | lineage2.2.1 | uz |
SAMEA2534711 | MDR-TB | lineage2.2.1 | uz |
ERR11488887 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488876 | MDR-TB | lineage2.2.1 | None |
ERR9807008 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29539081 | MDR-TB | lineage2.2.1 | None |
ERR11488781 | MDR-TB | lineage2.2.1 | None |
ERR8025468 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6797758 | MDR-TB | lineage2.2.1 | None |
ERR552530_ERR552531_ERR552532 | MDR-TB | lineage2.2.1 | None |
ERR8975708 | MDR-TB | lineage4.3.2.1 | None |
ERR9807031 | MDR-TB | lineage2.2.1 | None |
ERR9120089 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9120090 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488398 | MDR-TB | lineage2.2.1 | None |
ERR5987386 | Pre-XDR-TB | lineage2.2.1 | None |
SRR5486867 | MDR-TB | lineage4.8 | None |
ERR10748517 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29017168 | MDR-TB | lineage3 | None |
SRR29273895 | MDR-TB | lineage4 | None |
ERR4810613 | MDR-TB | lineage2.2.1 | cn |
SRR29539529 | MDR-TB | lineage2.2.1 | None |
ERR10748334 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10748408 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8025639 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5987444 | Pre-XDR-TB | lineage2.2.1 | None |
ERR551409 | MDR-TB | lineage2.2.1 | None |
ERR11488577 | MDR-TB | lineage2.2.1 | None |
ERR8665894 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6650110 | MDR-TB | lineage2.2.1 | None |
SRR10040148 | MDR-TB | lineage4.5 | None |
SRR1163290 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9120171 | RR-TB | lineage4.3.2.1 | None |
ERR11488783 | MDR-TB | lineage2.2.1 | None |
ERR10748139 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10040320 | MDR-TB | lineage2.2.1 | None |
ERR552530 | MDR-TB | lineage2.2.1 | None |
SRR10869270 | Pre-XDR-TB | lineage2.2.1 | None |
ERR551410 | MDR-TB | lineage2.2.1 | None |
ERR9806904 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10748435 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11662675 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488932 | MDR-TB | lineage2.2.1 | None |
SRR29016890 | MDR-TB | lineage2.2.1 | None |
ERR11488561 | MDR-TB | lineage2.2.1 | None |
SRR30180488 | MDR-TB | lineage2.2.1 | None |
ERR4011070 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4831092 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1181104 | Pre-XDR-TB | lineage2.2.1 | None |
ERR6362057 | MDR-TB | lineage4.3.4.2.1 | None |
SRR6964674 | MDR-TB | lineage1.1.2 | None |
SRR13232725 | Pre-XDR-TB | lineage2.2.1 | None |
SRR8375622 | MDR-TB | lineage1.1.2 | None |
SRR28044938 | Pre-XDR-TB | lineage2.2.1 | None |
ERR7911582 | Pre-XDR-TB | lineage2.2.1 | za |
ERR7911074 | MDR-TB | lineage4.3.2.1 | za |
ERR7911069 | Pre-XDR-TB | lineage4.3.2.1 | md |
ERR7911700 | Pre-XDR-TB | lineage2.2.1 | za |
ERR11488751 | MDR-TB | lineage2.2.1 | None |
SRR6256965 | Pre-XDR-TB | lineage2.2.1 | None |
ERR1873535 | Pre-XDR-TB | lineage2.2.1 | za |
ERR1873464 | Pre-XDR-TB | lineage2.2.1 | za |
ERR067714 | MDR-TB | lineage2.2.1 | ru |
ERR229971 | MDR-TB | lineage2.2.1 | ru |
ERR11488329 | MDR-TB | lineage2.2.1 | None |
ERR11488744 | MDR-TB | lineage2.2.1 | None |
SRR29772515 | MDR-TB | lineage2.2.1.1 | None |
SRR10040314 | Pre-XDR-TB | lineage2.2.1 | None |
SRR3105802 | Pre-XDR-TB | lineage3 | None |
ERR13291126 | MDR-TB | lineage2.2.1 | None |
SRR5217439 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR5987381 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10748124 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1172367 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1181248 | Pre-XDR-TB | lineage2.2.1 | None |
SRR9738497 | MDR-TB | lineage4.8 | None |
ERR5987330 | MDR-TB | lineage4.3.4.2.1 | None |
ERR9806882 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1169090 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488816 | MDR-TB | lineage2.2.1 | None |
ERR10748104 | Pre-XDR-TB | lineage2.2.1 | None |
ERR1873394 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29273705 | MDR-TB | lineage4.1.2.1 | None |
ERR11488545 | MDR-TB | lineage2.2.1 | None |
SRR28868540 | MDR-TB | lineage2.2.1 | None |
ERR4553547 | MDR-TB | lineage2.2.1 | None |
SRR1159370 | Pre-XDR-TB | lineage2.2.1 | None |
ERR551410_ERR551409 | MDR-TB | lineage2.2.1 | None |
ERR9119773 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4553705 | MDR-TB | lineage3 | None |
ERR9119723 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25207217 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488346 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28045653 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13290922 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488975 | MDR-TB | lineage2.2.1 | None |
ERR11488708 | MDR-TB | lineage2.2.1 | None |
ERR13291128 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9119728 | MDR-TB | lineage4.3.2.1 | None |
SRR6785153 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29093761 | MDR-TB | lineage2.2.1 | None |
SRR29093700 | Pre-XDR-TB | lineage2.2.1 | None |
ERR6362141 | MDR-TB | lineage4.3.2.1 | None |
ERR9806957 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1163329 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13285266 | MDR-TB | lineage4.3.4.2.1 | None |
ERR8665743 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13290675 | Pre-XDR-TB | lineage2.1 | None |
ERR3470551 | MDR-TB | lineage3 | None |
SRR29055823 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3470675 | MDR-TB | lineage3 | None |
ERR11488669 | MDR-TB | lineage2.2.1 | None |
SRR29093485 | Pre-XDR-TB | lineage2.2.1 | None |
ERR7911689 | Pre-XDR-TB | lineage2.2.1 | za |
SRR10869104 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2510857 | MDR-TB | lineage4.1.2.1 | None |
SRR12062508 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5987459 | Pre-XDR-TB | lineage2.2.1 | None |
SRR15014678 | MDR-TB | lineage2.2.1.1 | None |
SRR13232744 | Pre-XDR-TB | lineage2.2.1 | None |
ERR552531 | MDR-TB | lineage2.2.1 | None |
SRR13232661 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5987245 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488637 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10748550 | XDR-TB | lineage2.2.1 | None |
ERR8665742 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1158946 | Pre-XDR-TB | lineage2.2.1 | None |
SRR7657752 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11734768 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4011083 | MDR-TB | lineage2.2.1 | None |
ERR228024 | MDR-TB | lineage2.2.1 | ru |
ERR3794380 | MDR-TB | lineage2.2.1 | None |
ERR9119871 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25207111 | MDR-TB | lineage2.2.1 | None |
ERR9120148 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488658 | MDR-TB | lineage2.2.1 | None |
SRR10040325 | Pre-XDR-TB | lineage2.2.1 | None |
ERR9120172 | MDR-TB | lineage4.3.2.1 | None |
ERR9806889 | Pre-XDR-TB | lineage2.2.1 | None |
SRR30180383 | MDR-TB | lineage2.2.1 | None |
SRR29096470 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665533 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3470667 | MDR-TB | lineage3 | None |
ERR13285267 | MDR-TB | lineage4.3.4.2.1 | None |
SRR29093758 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21576714 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11489020 | MDR-TB | lineage2.2.1 | None |
ERR7737854 | MDR-TB | lineage4.3.4.2 | None |
SRR12142370 | MDR-TB | lineage2.2.1 | None |
SRR10525364 | MDR-TB | lineage4 | None |
ERR11488521 | MDR-TB | lineage2.2.1 | None |
ERR552532 | MDR-TB | lineage2.2.1 | None |
ERR11488697 | MDR-TB | lineage2.2.1 | None |
ERR4827550 | MDR-TB | lineage2.2.1 | None |
ERR10748535 | MDR-TB | lineage4.3.2.1 | None |
ERR3470665 | MDR-TB | lineage3 | None |
ERR11488371 | MDR-TB | lineage2.2.1 | None |
ERR11488355 | MDR-TB | lineage2.2.1 | None |
ERR13260053 | MDR-TB | lineage4.1.1.3 | None |
ERR11489013 | MDR-TB | lineage2.2.1 | None |