Rv0678 - c.139dupG


Drug resistance types
0 Sensitive 0 RR-TB 0 HR-TB 8 MDR-TB 130 Pre-XDR-TB 22 XDR-TB 0 Other
lineage Counts
lineage Count
lineage3 14
lineage2.2.1 52
lineage2.2.1.1 3
lineage4.1.4 3
lineage2.2.2 33
lineage4.3.3 17
lineage4.5 3
lineage4.3.2 1
lineage4.1.1.3 4
lineage4.3.4.2.1 2
lineage4 1
lineage4.1 1
lineage3.1 1
lineage4.4.1.1 1
lineage4.1.2.1 2
lineage4.8 8
lineage4.1.1.2 1
lineage4.9;lineage2.2.1 1
lineage1.2.2.2 2
lineage4.3.2.1 1
lineage4.4.1.1.1 2
lineage2.2.1.2 2
lineage3;lineage2.2.1;lineage1.2.2.2 1
lineage4.3.4.1 1
lineage3;lineage2.2.1.2 1
lineage1.1.2 1
lineage3.1.2 1
spoligotype Counts
spoligotype Count
None 160
Geographic prevalence
Country level data for this variant is available for 34 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4799738 Pre-XDR-TB lineage3 in
ERR4797607 Pre-XDR-TB lineage2.2.1 in
ERR4830950 Pre-XDR-TB lineage2.2.1 np
ERR4800476 XDR-TB lineage2.2.1.1 in
ERR4799933 Pre-XDR-TB lineage2.2.1 in
SRR6848321 Pre-XDR-TB lineage4.1.4 None
ERR4831577 Pre-XDR-TB lineage2.2.1 None
SRR9971117 Pre-XDR-TB lineage2.2.2 None
SRR9971254 Pre-XDR-TB lineage2.2.2 None
SRR9971329 Pre-XDR-TB lineage2.2.2 None
ERR11488654 MDR-TB lineage4.3.3 None
SRR9971062 Pre-XDR-TB lineage2.2.2 None
SRR9971143 Pre-XDR-TB lineage2.2.2 None
SRR9028478 Pre-XDR-TB lineage3 None
DRR130166 Pre-XDR-TB lineage2.2.1 None
SRR9028480 Pre-XDR-TB lineage3 None
SRR9028491 Pre-XDR-TB lineage3 None
DRR130059 Pre-XDR-TB lineage4.5 None
ERR11489056 Pre-XDR-TB lineage4.3.2 None
ERR11488502 Pre-XDR-TB lineage4.3.3 None
ERR11488528 MDR-TB lineage4.3.3 None
ERR11489031 Pre-XDR-TB lineage2.2.2 None
ERR11488954 Pre-XDR-TB lineage4.1.1.3 None
ERR11488678 MDR-TB lineage4.3.3 None
ERR11488841 Pre-XDR-TB lineage4.3.4.2.1 None
ERR2515337 Pre-XDR-TB lineage4.1.1.3 za
ERR10748106 XDR-TB lineage2.2.1 None
ERR10748328 MDR-TB lineage2.2.1 None
ERR4553665 Pre-XDR-TB lineage4 None
ERR4553946 Pre-XDR-TB lineage2.2.1 None
ERR11488867 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488934 Pre-XDR-TB lineage2.2.2 None
ERR2515301 Pre-XDR-TB lineage2.2.1 za
ERR11488689 MDR-TB lineage4.3.3 None
ERR11043975 Pre-XDR-TB lineage2.2.1 None
ERR4553894 Pre-XDR-TB lineage4.1 None
ERR4553975 Pre-XDR-TB lineage3.1 None
ERR11488983 Pre-XDR-TB lineage2.2.2 None
ERR5917976 Pre-XDR-TB lineage4.3.3 za
ERR8975509 XDR-TB lineage4.4.1.1 None
ERR5917997 XDR-TB lineage2.2.2 za
ERR5918016 Pre-XDR-TB lineage2.2.1 za
ERR4808997 Pre-XDR-TB lineage2.2.2 za
ERR4808856 XDR-TB lineage2.2.2 za
ERR5918020 Pre-XDR-TB lineage2.2.1 za
ERR4799951 Pre-XDR-TB lineage2.2.1 None
ERR4808903 XDR-TB lineage2.2.2 za
ERR4808866 XDR-TB lineage2.2.2 za
ERR5918042 Pre-XDR-TB lineage4.3.3 za
ERR8975760 Pre-XDR-TB lineage4.1.2.1 None
ERR8975717 Pre-XDR-TB lineage4.1.1.3 None
ERR5918116 Pre-XDR-TB lineage4.1.2.1 za
ERR8975005 Pre-XDR-TB lineage2.2.1 None
ERR8975762 Pre-XDR-TB lineage2.2.1 None
ERR8975648 XDR-TB lineage2.2.1 None
ERR8975821 XDR-TB lineage4.3.3 None
ERR8975982 XDR-TB lineage4.3.3 None
ERR5917970 Pre-XDR-TB lineage4.3.3 za
ERR8975813 Pre-XDR-TB lineage2.2.2 None
ERR4830565 Pre-XDR-TB lineage2.2.2 None
ERR8975668 Pre-XDR-TB lineage2.2.1 None
ERR8975752 Pre-XDR-TB lineage2.2.1 None
ERR5897077 Pre-XDR-TB lineage3 None
ERR4830556 Pre-XDR-TB lineage2.2.2 None
ERR5897099 Pre-XDR-TB lineage3 None
ERR8975807 MDR-TB lineage4.8 None
ERR688031 Pre-XDR-TB lineage3 None
SRR22873606 Pre-XDR-TB lineage2.2.1 None
ERR9029361 Pre-XDR-TB lineage2.2.2 None
ERR9030317 Pre-XDR-TB lineage2.2.1 None
ERR9030358 Pre-XDR-TB lineage2.2.1 None
ERR9030482 Pre-XDR-TB lineage2.2.1 None
ERR9992628 Pre-XDR-TB lineage2.2.2 None
ERR9992656 Pre-XDR-TB lineage2.2.1 None
ERR9992695 Pre-XDR-TB lineage4.3.3 None
ERR9992662 XDR-TB lineage2.2.1 None
ERR9992723 XDR-TB lineage2.2.2 None
ERR9992697 Pre-XDR-TB lineage4.1.1.3 None
ERR9992817 Pre-XDR-TB lineage2.2.2 None
ERR9992727 Pre-XDR-TB lineage2.2.1.1 None
ERR9992761 Pre-XDR-TB lineage4.1.1.2 None
ERR9992815 Pre-XDR-TB lineage2.2.2 None
ERR9992823 Pre-XDR-TB lineage2.2.2 None
ERR9992865 Pre-XDR-TB lineage4.8 None
ERR9992841 Pre-XDR-TB lineage4.3.3 None
ERR9992872 Pre-XDR-TB lineage2.2.1 None
ERR9992893 Pre-XDR-TB lineage4.3.3 None
ERR9992887 Pre-XDR-TB lineage2.2.2 None
ERR9992930 Pre-XDR-TB lineage4.8 None
ERR9992899 Pre-XDR-TB lineage4.9;lineage2.2.1 None
ERR9992931 Pre-XDR-TB lineage4.8 None
ERR9992934 Pre-XDR-TB lineage4.8 None
ERR9992965 Pre-XDR-TB lineage2.2.1 None
ERR9992932 Pre-XDR-TB lineage1.2.2.2 None
ERR9992957 XDR-TB lineage4.3.3 None
ERR9993004 XDR-TB lineage2.2.2 None
ERR9992964 Pre-XDR-TB lineage1.2.2.2 None
ERR9993005 XDR-TB lineage2.2.2 None
ERR9993019 Pre-XDR-TB lineage2.2.2 None
ERR9993012 Pre-XDR-TB lineage4.8 None
ERR9993026 Pre-XDR-TB lineage3 None
ERR9993064 Pre-XDR-TB lineage4.8 None
ERR9993050 XDR-TB lineage2.2.2 None
ERR9993081 Pre-XDR-TB lineage4.3.3 None
ERR9993076 XDR-TB lineage2.2.2 None
ERR9993084 Pre-XDR-TB lineage4.3.2.1 None
ERR9993108 Pre-XDR-TB lineage2.2.1 None
ERR9993100 Pre-XDR-TB lineage3 None
ERR9993115 Pre-XDR-TB lineage2.2.1 None
ERR9993113 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9993126 Pre-XDR-TB lineage2.2.2 None
SRR10869039 Pre-XDR-TB lineage2.2.2 None
ERR9993232 Pre-XDR-TB lineage2.2.1 None
ERR9993243 Pre-XDR-TB lineage4.3.3 None
ERR9993258 Pre-XDR-TB lineage4.4.1.1.1 None
SRR13355779 Pre-XDR-TB lineage2.2.1 None
SRR12266251 Pre-XDR-TB lineage4.1.4 None
SRR11349170 Pre-XDR-TB lineage2.2.2 None
SRR19276599 Pre-XDR-TB lineage4.3.3 None
SRR12266248 Pre-XDR-TB lineage4.1.4 None
SRR20632770 Pre-XDR-TB lineage2.2.1 None
SRR25827870 Pre-XDR-TB lineage2.2.1.2 None
SRR20632777 Pre-XDR-TB lineage2.2.1 None
SRR21001882 XDR-TB lineage2.2.1 None
SRR21001883 XDR-TB lineage2.2.1 None
SRR25207318 Pre-XDR-TB lineage4.5 None
SRR25827642 MDR-TB lineage2.2.1 None
SRR25827617 XDR-TB lineage3;lineage2.2.1;lineage1.2.2.2 None
SRR22873603 Pre-XDR-TB lineage2.2.1 None
ERR8025652 Pre-XDR-TB lineage2.2.2 None
ERR10112851 Pre-XDR-TB lineage2.2.1 None
ERR3276301 Pre-XDR-TB lineage2.2.1 None
ERR3276302 Pre-XDR-TB lineage2.2.1 None
ERR5758334 Pre-XDR-TB lineage2.2.2 None
SRR24710119 MDR-TB lineage2.2.1 None
SRR25206910 Pre-XDR-TB lineage4.5 None
SRR26397809 XDR-TB lineage4.3.4.1 None
SRR25827819 Pre-XDR-TB lineage2.2.1.2 None
SRR24255938 XDR-TB lineage2.2.1 None
SRR25827344 Pre-XDR-TB lineage2.2.1.1 None
SRR25827318 Pre-XDR-TB lineage3;lineage2.2.1.2 None
ERR1352350 Pre-XDR-TB lineage2.2.1 cn
ERR1352352 Pre-XDR-TB lineage2.2.1 cn
ERR1352354 Pre-XDR-TB lineage2.2.1 cn
ERR1352355 Pre-XDR-TB lineage2.2.1 cn
ERR1352357 Pre-XDR-TB lineage2.2.1 cn
ERR1352351 Pre-XDR-TB lineage2.2.1 cn
ERR1352353 Pre-XDR-TB lineage2.2.1 cn
ERR1352356 Pre-XDR-TB lineage2.2.1 cn
ERR1352358 Pre-XDR-TB lineage2.2.1 cn
ERR4797756 Pre-XDR-TB lineage3 in
ERR1034599 Pre-XDR-TB lineage3 pk
ERR11050991 Pre-XDR-TB lineage2.2.1 None
SRR5817476 Pre-XDR-TB lineage1.1.2 None
ERR4797661 Pre-XDR-TB lineage3 in
ERR4800460 Pre-XDR-TB lineage2.2.1 in
ERR4797181 Pre-XDR-TB lineage3 in
ERR4799005 Pre-XDR-TB lineage3 in
ERR4797223 Pre-XDR-TB lineage3.1.2 in
ERR4829313 Pre-XDR-TB lineage4.8 None