Rv0701 - c.-561C>T
Drug resistance types
39 Sensitive
0 RR-TB
1 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage4.3.4.2 | 1 |
| lineage1.1.2 | 10 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.3.4.2 | 25 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22179535 | Pre-XDR-TB | lineage2.2.1;lineage4.3.4.2 | None | ERR4821063 | Sensitive | lineage1.1.2 | gb | SRR7069857 | Sensitive | lineage1.1.2 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815670 | Sensitive | lineage1.1.2 | None | SRR7070110 | Sensitive | lineage1.1.2 | None | ERR386994 | Sensitive | lineage3.1.2.1 | None | SRR22179533 | Sensitive | lineage4.3.4.2 | None | SRR21690673 | Sensitive | lineage4.3.4.2 | None | SRR21690180 | Sensitive | lineage4.3.4.2 | None | SRR21690127 | Sensitive | lineage4.3.4.2 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR2517403 | Sensitive | lineage4.3.4.2 | nl | SRR21690930 | Sensitive | lineage4.3.4.2 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR21691107 | Sensitive | lineage4.3.4.2 | None | ERR3276098 | Sensitive | lineage4.3.4.2 | nl | ERR4814874 | Sensitive | lineage1.1.2 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR1193709 | Sensitive | lineage4.3.3 | ao | ERR3275829 | Sensitive | lineage4.3.4.2 | nl | ERR3275773 | Sensitive | lineage4.3.4.2 | nl | ERR4814352 | Other | lineage2.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR22190940 | Sensitive | lineage4.3.4.2 | None | SRR21690711 | Sensitive | lineage4.3.4.2 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR21691048 | Sensitive | lineage4.3.4.2 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3275895 | Sensitive | lineage4.3.4.2 | nl | SRR21690827 | Sensitive | lineage4.3.4.2 | None | ERR2446236 | Sensitive | lineage4.3.4.2 | nl | ERR3275802 | Sensitive | lineage4.3.4.2 | nl | SRR21689502 | Sensitive | lineage4.3.4.2 | None | SRR21689608 | Sensitive | lineage4.3.4.2 | None | ERR3276237 | Sensitive | lineage4.3.4.2 | nl | ERR2514846 | Sensitive | lineage3.1.2.1 | gb | SRR21689843 | Sensitive | lineage4.3.4.2 | None | SRR7070169 | Sensitive | lineage1.1.2 | None | ERR3275655 | Sensitive | lineage4.3.4.2 | nl | ERR4815098 | Sensitive | lineage1.1.2 | gb | ERR4816984 | Sensitive | lineage1.1.2 | gb | SRR21690656 | Sensitive | lineage4.3.4.2 | None | SRR22179532 | Sensitive | lineage4.3.4.2 | None | ERR4817714 | Sensitive | lineage1.1.2 | gb | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR7070160 | Sensitive | lineage1.1.2 | None | ERR11591441 | Sensitive | lineage4.3.3 | None | ERR3276169 | Sensitive | lineage4.3.4.2 | nl | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
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