lineage | Count |
---|---|
lineage4.8 | 127 |
lineage4.7 | 7 |
lineage4.1.2.1 | 6 |
lineage2.2.1 | 4 |
lineage4.1.1.3;lineage4.8 | 4 |
lineage4.4.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.2.2.2 | 1 |
lineage4.2.1 | 1 |
lineage4.1.3 | 1 |
spoligotype | Count |
---|---|
None | 153 |
ID | Drug resistance | Lineage | Country iso2 | SRR10315640 | MDR-TB | lineage4.8 | None | SRR1173785 | MDR-TB | lineage4.8 | None | ERR10610361 | MDR-TB | lineage4.8 | None | SRR1184362 | MDR-TB | lineage4.8 | None | SRR833178 | MDR-TB | lineage4.8 | None | SRR1175511 | MDR-TB | lineage4.8 | None | ERR4830480 | MDR-TB | lineage4.8 | za | ERR9992934 | XDR-TB | lineage4.8 | None | ERR4872046 | XDR-TB | lineage4.7 | None | SRR1175516 | MDR-TB | lineage4.8 | None | SRR1173248 | Pre-XDR-TB | lineage4.8 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR10748186 | MDR-TB | lineage4.8 | None | SAMN02586007 | MDR-TB | lineage4.8 | za | SAMN02403613 | MDR-TB | lineage4.8 | za | ERR7737872 | MDR-TB | lineage4.8 | None | SRR9971175 | MDR-TB | lineage4.8 | None | SRR1167294 | Pre-XDR-TB | lineage4.8 | None | SAMN02403509 | Pre-XDR-TB | lineage4.8 | za | SRR9971298 | MDR-TB | lineage4.8 | None | SRR1169331 | MDR-TB | lineage4.8 | None | ERR9786288 | Sensitive | lineage4.1.2.1 | None | SAMN03246453 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1173278 | MDR-TB | lineage4.8 | None | SRR1175517 | MDR-TB | lineage4.8 | None | SRR1167279 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | SRR9970998 | MDR-TB | lineage4.8 | None | SRR1174827 | MDR-TB | lineage4.8 | None | SRR1169201 | MDR-TB | lineage4.8 | None | SRR1184341 | MDR-TB | lineage4.8 | None | ERR2515713 | MDR-TB | lineage4.8 | za | SRR1167269 | MDR-TB | lineage4.8 | None | ERR4872043 | Pre-XDR-TB | lineage4.7 | None | SRR1723722 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02586039 | MDR-TB | lineage4.8 | za | SRR9971046 | MDR-TB | lineage4.8 | None | SRR14165017 | HR-TB | lineage4.4.1.1 | None | SRR1175510 | MDR-TB | lineage4.8 | None | SAMN01828247 | MDR-TB | lineage4.8 | za | ERR9993012 | XDR-TB | lineage4.8 | None | SAMN02403599 | MDR-TB | lineage4.8 | za | ERR4872039 | XDR-TB | lineage4.7 | None | ERR2864285 | MDR-TB | lineage4.1.1.3 | pt | ERR9993131 | XDR-TB | lineage4.8 | None | SRR9971337 | MDR-TB | lineage4.8 | None | ERR8975915 | XDR-TB | lineage4.8 | None | SRR1169213 | MDR-TB | lineage4.8 | None | SRR20969758 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169081 | MDR-TB | lineage4.8 | None | SRR1175469 | MDR-TB | lineage4.8 | None | ERR11044866 | Sensitive | lineage4.1.2.1 | None | ERR7737818 | MDR-TB | lineage4.8 | None | SRR9971178 | MDR-TB | lineage4.8 | None | ERR10748468 | MDR-TB | lineage4.8 | None | ERR11050915 | HR-TB | lineage4.2.2.2 | None | ERR7737925 | MDR-TB | lineage4.8 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR6855777 | MDR-TB | lineage4.8 | None | ERR4815803 | Sensitive | lineage4.8 | None | ERR10748170 | MDR-TB | lineage4.8 | None | ERR10610150 | MDR-TB | lineage4.8 | None | SRR1165697 | MDR-TB | lineage4.8 | None | ERR9786189 | Sensitive | lineage4.1.2.1 | None | SRR1173724 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SAMN02350418 | Pre-XDR-TB | lineage4.8 | za | SRR1172261 | MDR-TB | lineage4.8 | None | ERR2516068 | MDR-TB | lineage4.8 | za | SRR9971362 | MDR-TB | lineage4.8 | None | SAMN02403623 | MDR-TB | lineage4.8 | za | SRR9971094 | MDR-TB | lineage4.8 | None | SRR1165276 | Pre-XDR-TB | lineage4.8 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR1184295 | MDR-TB | lineage4.8 | None | SRR833108 | MDR-TB | lineage4.8 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1165719 | MDR-TB | lineage4.8 | None | ERR4872047 | XDR-TB | lineage4.7 | None | ERR133834 | MDR-TB | lineage4.2.1 | ru | SRR1011459 | Pre-XDR-TB | lineage4.8 | None | ERR9993102 | MDR-TB | lineage4.8 | None | ERR10748219 | MDR-TB | lineage4.8 | None | ERR4872048 | XDR-TB | lineage4.7 | None | SRR1165328 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | SRR1165701 | MDR-TB | lineage4.8 | None | SRR1173443 | Pre-XDR-TB | lineage4.8 | None | SRR1011481 | MDR-TB | lineage4.8 | None | SRR1196498 | MDR-TB | lineage4.8 | None | SRR833005 | MDR-TB | lineage4.8 | None | ERR7361991 | Pre-XDR-TB | lineage4.8 | None | SRR9971278 | Pre-XDR-TB | lineage4.8 | None | ERR13288738 | MDR-TB | lineage4.8 | None | ERR13288980 | MDR-TB | lineage4.8 | None | ERR13289355 | XDR-TB | lineage4.8 | None | ERR13289303 | MDR-TB | lineage4.8 | None | ERR8975812 | Pre-XDR-TB | lineage4.8 | None | SRR833047 | MDR-TB | lineage4.8 | None | ERR11082668 | Pre-XDR-TB | lineage4.1.3 | None | SRR10315474 | MDR-TB | lineage4.8 | None | SAMN02403612 | MDR-TB | lineage4.8 | za | ERR9119823 | MDR-TB | lineage4.8 | None | ERR2515202 | MDR-TB | lineage4.8 | za | SRR833004 | MDR-TB | lineage4.8 | None | ERR11488715 | MDR-TB | lineage4.8 | None | SRR1062829 | Pre-XDR-TB | lineage4.8 | None | SRR11342695 | MDR-TB | lineage4.8 | None | SRR10315603 | MDR-TB | lineage4.8 | None | ERR2199784 | Sensitive | lineage4.1.2.1 | de | ERR11081826 | RR-TB | lineage4.1.2.1 | None | SRR1173861 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | SRR1062832 | Pre-XDR-TB | lineage4.8 | None | SAMN02403622 | MDR-TB | lineage4.8 | za | SRR1167346 | MDR-TB | lineage4.8 | None | ERR2515152 | MDR-TB | lineage4.8 | za | ERR9993064 | XDR-TB | lineage4.8 | None | SRR1165265 | MDR-TB | lineage4.8 | None | SRR1175521 | MDR-TB | lineage4.8 | None | ERR9806668 | MDR-TB | lineage4.8 | None | SRR1173088 | MDR-TB | lineage4.8 | None | SAMN02350419 | Pre-XDR-TB | lineage4.8 | za | SRR10315652 | MDR-TB | lineage4.8 | None | ERR552701 | MDR-TB | lineage4.8 | sz | SRR9971152 | MDR-TB | lineage4.8 | None | ERR10748205 | MDR-TB | lineage4.8 | None | ERR10748545 | MDR-TB | lineage4.8 | None | SRR1169149 | MDR-TB | lineage4.8 | None | ERR9992865 | XDR-TB | lineage4.8 | None | SRR1011460 | Pre-XDR-TB | lineage4.8 | None | SRR1173252 | MDR-TB | lineage4.8 | None | SRR1167386 | MDR-TB | lineage4.8 | None | SAMN02403598 | MDR-TB | lineage4.8 | za | ERR9806691 | MDR-TB | lineage4.8 | None | SRR1165666 | MDR-TB | lineage4.8 | None | ERR6362920 | MDR-TB | lineage4.8 | None | SRR1062852 | MDR-TB | lineage4.8 | None | SRR1196505 | MDR-TB | lineage4.8 | None | SRR1169293 | MDR-TB | lineage4.8 | None | SRR21710932 | Other | lineage4.1.2.1 | None | SRR1723723 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872044 | XDR-TB | lineage4.7 | None | SAMN02350438 | MDR-TB | lineage4.8 | za | SAMN02586042 | MDR-TB | lineage4.8 | za | SRR9971122 | MDR-TB | lineage4.8 | None | SRR1165715 | MDR-TB | lineage4.8 | None | ERR4872042 | XDR-TB | lineage4.7 | None | ERR11488918 | MDR-TB | lineage4.8 | None | ERR9992930 | XDR-TB | lineage4.8 | None | SAMN02403508 | MDR-TB | lineage4.8 | None | ERR11773742 | MDR-TB | lineage4.8 | None | ERR11775604 | MDR-TB | lineage4.8 | None | SRR1175083 | MDR-TB | lineage4.8 | None | ERR9992931 | XDR-TB | lineage4.8 | None | ERR7911435 | MDR-TB | lineage4.8 | za |
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