TB-Profiler
Home
Upload
SRA data
Rv1258c
- c.-40C>T
Drug resistance types
35 Sensitive
2 RR-TB
6 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.5
45
lineage1.2.2.2
1
lineage2.2.1;lineage4.4.2;lineage4.5
1
lineage2.2.1
1
Showing 1 to 4 of 4 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
48
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13265698
Sensitive
lineage1.2.2.2
None
ERR2179635
HR-TB
lineage4.5
cn
ERR2179691
Sensitive
lineage4.5
cn
ERR4810490
Sensitive
lineage4.5
cn
ERR4810502
Sensitive
lineage4.5
cn
ERR4810527
HR-TB
lineage4.5
cn
ERR4810749
Sensitive
lineage4.5
cn
ERR4810760
Sensitive
lineage4.5
cn
ERR4811151
HR-TB
lineage4.5
cn
ERR4811189
Sensitive
lineage4.5
cn
Showing 1 to 10 of 48 entries
Previous
1
2
3
4
5
Next