lineage | Count |
---|---|
lineage2.2.1 | 12 |
lineage4.3.4.1 | 1 |
lineage4.4.1.1 | 4 |
lineage5.3 | 1 |
lineage4.1.1.2 | 1 |
lineage1.2.2.2 | 2 |
lineage2.2 | 4 |
lineage1 | 1 |
La1.8.1 | 4 |
La1.2 | 1 |
lineage4.8 | 9 |
lineage4 | 1 |
lineage1.1.2 | 1 |
lineage3 | 6 |
lineage1.1.1 | 1 |
lineage4.6.1.1 | 1 |
lineage7 | 3 |
lineage4.1 | 1 |
lineage4.3.4.2 | 2 |
lineage4.1.1.3 | 2 |
lineage4.8.1 | 1 |
lineage4.3 | 1 |
lineage4.6.1.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.7 | 1 |
lineage4.1.2.1 | 5 |
lineage3.1.1 | 3 |
lineage2.2.1.1 | 1 |
1 | |
lineage5.1 | 1 |
lineage4.1.2 | 1 |
lineage4.2 | 2 |
lineage4.2.2 | 1 |
lineage4.9;lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 | SRR1002684 | MDR-TB | lineage2.2.1 | None | ERR9285856 | Sensitive | lineage4.3.4.1 | None | ERR9285887 | Sensitive | lineage4.4.1.1 | None | ERR11050123 | RR-TB | lineage5.3 | None | SRR057731 | Sensitive | lineage4.1.1.2 | None | SRR1002680 | MDR-TB | lineage2.2.1 | None | SRR1002678 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882039 | Sensitive | lineage1.2.2.2 | None | SRR1002694 | MDR-TB | lineage2.2 | None | SRR11972163 | Sensitive | lineage1 | None | SRR12882037 | Sensitive | lineage1.2.2.2 | None | SRR1791912 | Other | La1.8.1 | None | SRR13986568 | Other | La1.2 | None | SRR1657063 | Other | La1.8.1 | None | SRR16962459 | Sensitive | lineage4.8 | None | SRR1792089 | Other | La1.8.1 | None | ERR11068508 | Sensitive | lineage2.2.1 | None | SRR1792506 | Other | La1.8.1 | None | SRR21675426 | Other | lineage4 | None | SRR21677860 | Sensitive | lineage2.2 | None | ERR464767 | Sensitive | lineage4.4.1.1 | None | ERR4815797 | HR-TB | lineage1.1.2 | None | ERR2229341 | Sensitive | lineage4.8 | dk | ERR1200663 | Sensitive | lineage3 | None | ERR233363 | Sensitive | lineage1.1.1 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR1200603 | Sensitive | lineage7 | None | ERR4815075 | MDR-TB | lineage3 | None | ERR4815800 | Other | lineage4.8 | None | ERR4814841 | Other | lineage4.1 | None | ERR1949964 | Other | lineage4.8 | None | ERR1193649 | Sensitive | lineage4.3.4.2 | None | ERR233346 | Sensitive | lineage7 | None | ERR4817418 | Sensitive | lineage4.4.1.1 | None | ERR4816649 | Other | lineage3 | None | ERR233357 | Sensitive | lineage2.2.1 | None | ERR4817389 | Other | lineage3 | None | ERR4816755 | Other | lineage4.1.1.3 | None | SRR4033263 | Sensitive | lineage4.8.1 | None | ERR2229521 | Sensitive | lineage4.8 | None | ERR1193643 | Sensitive | lineage4.3.4.2 | None | ERR2513140 | Sensitive | lineage4.3 | None | ERR4818673 | Sensitive | lineage4.8 | None | SAMEA3671481 | Sensitive | lineage4.6.1.2 | None | ERR1200632 | Sensitive | lineage1.1.3.1 | et | ERR4817987 | Other | lineage4.7 | None | ERR4818036 | Sensitive | lineage4.1.2.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR1200654 | Sensitive | lineage3.1.1 | None | ERR4818322 | Other | lineage4.1.2.1 | None | ERR464776 | Sensitive | lineage4.4.1.1 | ch | ERR4818949 | Sensitive | lineage3.1.1 | None | ERR4819871 | Sensitive | lineage4.8 | None | ERR4817552 | Sensitive | lineage2.2.1.1 | None | ERR4819470 | Sensitive | lineage4.8 | None | ERR4821161 | Sensitive | lineage3 | None | ERR4821121 | Sensitive | lineage4.1.2.1 | None | ERR4820979 | Other | lineage3 | None | ERR4822013 | Other | None | ERR4821194 | Sensitive | lineage4.1.2.1 | None | ERR1200630 | Sensitive | lineage3.1.1 | et | ERR841438 | Sensitive | lineage5.1 | gh | ERR1200634 | Sensitive | lineage7 | et | SRR6257040 | MDR-TB | lineage2.2.1 | None | SRR6257035 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257069 | MDR-TB | lineage2.2 | None | SRR6257061 | MDR-TB | lineage2.2.1 | None | ERR4831744 | MDR-TB | lineage2.2.1 | None | ERR4972535 | MDR-TB | lineage4.1.2 | None | ERR4831724 | HR-TB | lineage2.2 | None | ERR4831743 | HR-TB | lineage4.1.2.1 | None | ERR019562 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488784 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR8791314 | Pre-XDR-TB | lineage4.2 | None | ERR019862 | MDR-TB | lineage2.2.1 | None | ERR019868 | Sensitive | lineage4.2.2 | None | ERR019861 | Sensitive | lineage4.9;lineage2.2.1 | None | ERR026646 | Sensitive | lineage4.2 | None | ERR4820560 | Sensitive | lineage2.2.1 | gb |
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