Rv1484 - c.-337C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
115 Sensitive
7 RR-TB
10 HR-TB
69 MDR-TB
48 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1 | 241 |
| lineage4.1.1;lineage4.1.2.1 | 6 |
| lineage4.1.1;lineage4.3.3 | 1 |
| lineage2.2.1 | 3 |
| lineage4.1.1;lineage4.3.2 | 2 |
| lineage4.1.1;lineage4.3.4.2 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 255 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4195320 | Sensitive | lineage4.1.1 | None | ERR4813615 | MDR-TB | lineage4.1.1 | None | SRR26112426 | Sensitive | lineage4.1.1 | None | SRR28860191 | Sensitive | lineage4.1.1 | None | ERR13260649 | MDR-TB | lineage4.1.1 | None | ERR6865775 | Pre-XDR-TB | lineage4.1.1;lineage4.1.2.1 | None | ERR751380 | Sensitive | lineage4.1.1 | pe | ERR6866174 | Sensitive | lineage4.1.1;lineage4.1.2.1 | None | SRR22536495 | Pre-XDR-TB | lineage4.1.1 | None | ERR13292037 | Sensitive | lineage4.1.1 | None | ERR4178219 | Pre-XDR-TB | lineage4.1.1;lineage4.1.2.1 | None | SRR28859768 | Sensitive | lineage4.1.1 | None | ERR6865307 | Sensitive | lineage4.1.1 | None | ERR13260646 | Pre-XDR-TB | lineage4.1.1 | None | ERR11082594 | Sensitive | lineage4.1.1 | None | SRR28859796 | Sensitive | lineage4.1.1 | None | ERR4178208 | Sensitive | lineage4.1.1 | None | ERR6865769 | Sensitive | lineage4.1.1 | None | ERR13292162 | RR-TB | lineage4.1.1 | None | SRR13870383 | Pre-XDR-TB | lineage4.1.1 | None | SRR29126424 | Sensitive | lineage4.1.1 | None | ERR13260701 | MDR-TB | lineage4.1.1 | None | ERR13260007 | MDR-TB | lineage4.1.1 | None | SRR18911004 | Sensitive | lineage4.1.1 | None | SRR16370474 | MDR-TB | lineage4.1.1 | None | SRR28393998 | HR-TB | lineage4.1.1 | None | SRR28858444 | MDR-TB | lineage4.1.1 | None | SRR28860175 | Sensitive | lineage4.1.1 | None | ERR6865852 | Other | lineage4.1.1 | None | SRR28860188 | Sensitive | lineage4.1.1 | None | ERR4024602 | Sensitive | lineage4.1.1 | None | ERR4813607 | Pre-XDR-TB | lineage4.1.1 | None | ERR13261662 | Pre-XDR-TB | lineage4.1.1 | None | ERR4829494 | Sensitive | lineage4.1.1 | None | SRR26112278 | Sensitive | lineage4.1.1 | None | SRR29126296 | Sensitive | lineage4.1.1 | None | SRR26112724 | Sensitive | lineage4.1.1 | None | SRR13870369 | Pre-XDR-TB | lineage4.1.1 | None | SRR21710933 | Sensitive | lineage4.1.1 | None | SRR29126848 | Sensitive | lineage4.1.1 | None | ERR4024648 | Sensitive | lineage4.1.1 | None | ERR4178245 | Sensitive | lineage4.1.1 | None | ERR4811716 | HR-TB | lineage4.1.1 | pe | ERR4812174 | Sensitive | lineage4.1.1 | pe | SRR28859973 | Sensitive | lineage4.1.1 | None | ERR7910876 | MDR-TB | lineage4.1.1 | None | ERR4813341 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4813361 | Pre-XDR-TB | lineage4.1.1 | None | ERR4813399 | MDR-TB | lineage4.1.1 | pe | ERR4813456 | Pre-XDR-TB | lineage4.1.1 | pe | ERR2184580 | Sensitive | lineage4.1.1 | pe | ERR6866903 | Sensitive | lineage4.1.1 | None | ERR2184617 | Sensitive | lineage4.1.1 | None | ERR2184684 | MDR-TB | lineage4.1.1 | pe | ERR4812672 | Sensitive | lineage4.1.1 | None | ERR3287724 | MDR-TB | lineage4.1.1 | pe | ERR4812803 | MDR-TB | lineage4.1.1 | None | SRR28860147 | Sensitive | lineage4.1.1 | None | ERR4812833 | MDR-TB | lineage4.1.1 | pe | ERR4812759 | Sensitive | lineage4.1.1;lineage4.1.2.1 | pe | ERR4812900 | MDR-TB | lineage4.1.1 | pe | SRR28393736 | Sensitive | lineage4.1.1 | None | ERR7910861 | MDR-TB | lineage4.1.1 | pe | ERR7910866 | MDR-TB | lineage4.1.1 | pe | SRR22461690 | MDR-TB | lineage4.1.1 | None | ERR7910884 | MDR-TB | lineage4.1.1 | pe | ERR7910999 | RR-TB | lineage4.1.1 | pe | ERR7910882 | MDR-TB | lineage4.1.1 | pe | ERR7911340 | Pre-XDR-TB | lineage4.1.1 | pe | ERR6865395 | Sensitive | lineage4.1.1 | None | ERR4813330 | Pre-XDR-TB | lineage4.1.1 | None | SRR28860009 | Sensitive | lineage4.1.1 | None | ERR4813472 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4812385 | Sensitive | lineage4.1.1 | pe | ERR779919 | MDR-TB | lineage4.1.1 | pe | ERR4812583 | Sensitive | lineage4.1.1 | pe | ERR775322 | Pre-XDR-TB | lineage4.1.1 | pe | ERR751451 | Pre-XDR-TB | lineage4.1.1 | pe | ERR775377 | MDR-TB | lineage4.1.1 | pe | ERR4812816 | MDR-TB | lineage4.1.1 | None | ERR4812889 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4813003 | MDR-TB | lineage4.1.1 | None | ERR4813081 | MDR-TB | lineage4.1.1 | pe | ERR4813231 | Sensitive | lineage4.1.1 | pe | ERR779904 | MDR-TB | lineage4.1.1;lineage4.1.2.1 | pe | ERR11081107 | Sensitive | lineage4.1.1 | None | SRR6046351 | Sensitive | lineage4.1.1 | gb | SRR26112456 | Sensitive | lineage4.1.1 | None | ERR6865313 | Sensitive | lineage4.1.1 | None | SRR21710931 | Sensitive | lineage4.1.1 | None | SRR22461581 | MDR-TB | lineage4.1.1;lineage4.3.3 | None | ERR13260643 | Pre-XDR-TB | lineage4.1.1 | None | SRR28859949 | RR-TB | lineage4.1.1 | None | SRR26112580 | Sensitive | lineage4.1.1 | None | SRR29051486 | Sensitive | lineage2.2.1 | None | ERR4813691 | Pre-XDR-TB | lineage4.1.1 | None | ERR6865858 | Sensitive | lineage4.1.1 | None | ERR4178213 | Sensitive | lineage4.1.1 | None | ERR9121762 | Sensitive | lineage4.1.1 | None | ERR6866175 | Sensitive | lineage4.1.1;lineage4.1.2.1 | None | ERR13260265 | HR-TB | lineage4.1.1 | None | SRR22528571 | MDR-TB | lineage4.1.1 | None | SRR16370476 | MDR-TB | lineage4.1.1 | None | ERR4813106 | Pre-XDR-TB | lineage4.1.1 | None | SRR22249952 | Other | lineage2.2.1 | None | ERR3287859 | MDR-TB | lineage4.1.1 | pe | SRR18909912 | RR-TB | lineage4.1.1 | None | SRR28394220 | MDR-TB | lineage4.1.1 | None | SRR19276612 | HR-TB | lineage4.1.1 | None | ERR4812682 | Sensitive | lineage4.1.1 | None | ERR4024916 | MDR-TB | lineage4.1.1 | None | ERR4813150 | Pre-XDR-TB | lineage4.1.1 | None | ERR4813580 | Sensitive | lineage4.1.1 | None | ERR4813626 | Pre-XDR-TB | lineage4.1.1 | None | ERR4024524 | Sensitive | lineage4.1.1 | None | SRR7781505 | MDR-TB | lineage4.1.1 | None | SRR22528524 | Sensitive | lineage4.1.1 | None | ERR6865495 | Sensitive | lineage4.1.1 | None | SRR16370494 | MDR-TB | lineage4.1.1 | None | SRR19325577 | Sensitive | lineage4.1.1 | None | SRR26112614 | Sensitive | lineage4.1.1 | None | SRR22528578 | MDR-TB | lineage4.1.1 | None | ERR13292481 | Other | lineage4.1.1 | None | ERR6865451 | Sensitive | lineage4.1.1 | None | ERR13260319 | Pre-XDR-TB | lineage4.1.1 | None | SRR26112822 | Sensitive | lineage4.1.1 | None | SRR28858613 | RR-TB | lineage4.1.1 | None | ERR6866031 | MDR-TB | lineage4.1.1 | None | ERR4813127 | Pre-XDR-TB | lineage4.1.1 | None | ERR11043263 | Sensitive | lineage4.1.1 | None | ERR13260645 | MDR-TB | lineage4.1.1 | None | ERR4178210 | Sensitive | lineage4.1.1 | None | SRR28393322 | MDR-TB | lineage4.1.1 | None | SRR19241765 | Sensitive | lineage4.1.1 | None | ERR4829474 | Sensitive | lineage4.1.1 | None | ERR13260637 | Pre-XDR-TB | lineage4.1.1 | None | ERR7911341 | MDR-TB | lineage4.1.1 | pe | ERR13261615 | Pre-XDR-TB | lineage4.1.1 | None | ERR13260638 | MDR-TB | lineage4.1.1 | None | SRR28858638 | Sensitive | lineage4.1.1 | None | SRR28859792 | Sensitive | lineage4.1.1 | None | ERR4178169 | Sensitive | lineage4.1.1 | None | SRR22528561 | Sensitive | lineage4.1.1;lineage4.3.2 | None | SRR19317570 | Sensitive | lineage4.1.1 | None | ERR4813591 | MDR-TB | lineage4.1.1 | None | SRR26112644 | Sensitive | lineage4.1.1 | None | ERR13267433 | HR-TB | lineage4.1.1 | None | SRR21661636 | Sensitive | lineage4.1.1 | None | ERR13291385 | Sensitive | lineage4.1.1 | None | SRR29052976 | Sensitive | lineage4.1.1 | None | ERR7910877 | MDR-TB | lineage4.1.1 | None | ERR6866502 | Other | lineage4.1.1 | None | SRR29052873 | MDR-TB | lineage4.1.1 | None | ERR13260196 | MDR-TB | lineage4.1.1 | None | ERR13261609 | HR-TB | lineage4.1.1 | None | SRR19276632 | Pre-XDR-TB | lineage4.1.1 | None | SRR18914022 | Sensitive | lineage4.1.1 | None | SRR29055977 | Sensitive | lineage4.1.1 | None | ERR13260635 | Pre-XDR-TB | lineage4.1.1 | None | ERR4813147 | Pre-XDR-TB | lineage4.1.1 | None | ERR6866946 | Sensitive | lineage4.1.1 | None | ERR6866089 | Sensitive | lineage4.1.1 | None | SRR10808814 | MDR-TB | lineage4.1.1 | None | SRR22528527 | MDR-TB | lineage4.1.1 | None | SRR29053071 | Sensitive | lineage4.1.1 | None | ERR12117902 | Pre-XDR-TB | lineage4.1.1 | None | SRR22536488 | Pre-XDR-TB | lineage4.1.1 | None | ERR6865760 | Sensitive | lineage4.1.1 | None | ERR12117914 | Pre-XDR-TB | lineage4.1.1 | None | SRR28859767 | Sensitive | lineage4.1.1 | None | SRR29126396 | Sensitive | lineage4.1.1 | None | SRR21727717 | Sensitive | lineage4.1.1 | None | SRR29126376 | Sensitive | lineage4.1.1 | None | SRR29126309 | Sensitive | lineage4.1.1 | None | SRR29341593 | Sensitive | lineage4.1.1 | None | SRR28860062 | Sensitive | lineage4.1.1 | None | SRR28859946 | Sensitive | lineage4.1.1 | None | SRR26112474 | RR-TB | lineage4.1.1 | None | ERR13260644 | Pre-XDR-TB | lineage4.1.1 | None | SRR22528522 | MDR-TB | lineage4.1.1 | None | SRR16089672 | Sensitive | lineage4.1.1 | None | SRR28858441 | Sensitive | lineage4.1.1 | None | ERR13260440 | HR-TB | lineage4.1.1 | None | ERR13290144 | Other | lineage4.1.1 | None | SRR3732575 | Sensitive | lineage4.1.1 | None | ERR13260641 | Pre-XDR-TB | lineage4.1.1 | None | ERR13260416 | MDR-TB | lineage4.1.1 | None | ERR6866953 | MDR-TB | lineage4.1.1 | None | ERR6865581 | Sensitive | lineage4.1.1 | None | ERR4813120 | Pre-XDR-TB | lineage4.1.1;lineage4.3.2 | None | ERR4813140 | Pre-XDR-TB | lineage4.1.1 | None | ERR3287709 | MDR-TB | lineage4.1.1 | pe | ERR3287731 | MDR-TB | lineage4.1.1 | pe | ERR3287739 | MDR-TB | lineage4.1.1 | pe | SRR22461582 | MDR-TB | lineage4.1.1 | None | ERR4812406 | Sensitive | lineage4.1.1 | pe | ERR4813021 | MDR-TB | lineage4.1.1 | None | ERR779903 | MDR-TB | lineage4.1.1;lineage4.3.4.2 | pe | ERR4813454 | MDR-TB | lineage4.1.1 | pe | ERR3132201 | HR-TB | lineage4.1.1 | None | ERR4812072 | Sensitive | lineage4.1.1 | pe | ERR6866377 | HR-TB | lineage4.1.1 | None | ERR4828851 | MDR-TB | lineage4.1.1 | None | ERR4812956 | MDR-TB | lineage4.1.1 | pe | ERR4812975 | MDR-TB | lineage4.1.1 | pe | ERR4812982 | MDR-TB | lineage4.1.1 | pe | ERR4812985 | MDR-TB | lineage4.1.1 | pe | ERR4813008 | MDR-TB | lineage4.1.1 | pe | ERR4813075 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4813137 | Pre-XDR-TB | lineage4.1.1 | None | ERR4813308 | MDR-TB | lineage4.1.1 | None | ERR4813325 | MDR-TB | lineage4.1.1 | None | SRR13870381 | Pre-XDR-TB | lineage4.1.1 | None | SRR13870373 | Pre-XDR-TB | lineage4.1.1 | None | SRR13870393 | Pre-XDR-TB | lineage4.1.1 | None | ERR2516703 | MDR-TB | lineage4.1.1 | nl | ERR2516518 | Sensitive | lineage4.1.1 | pe | ERR2516523 | MDR-TB | lineage4.1.1 | pe | ERR2516517 | MDR-TB | lineage4.1.1 | pe | ERR2516532 | MDR-TB | lineage4.1.1 | pe | SRR22528557 | Sensitive | lineage4.1.1 | None | ERR4178155 | Other | lineage4.1.1 | None | SRR22528559 | Sensitive | lineage4.1.1 | None | SRR22528558 | Sensitive | lineage4.1.1 | None | SRR22528532 | Sensitive | lineage4.1.1 | None | SRR21658541 | Sensitive | lineage2.2.1 | None | SRR10808887 | Sensitive | lineage4.1.1 | None | ERR13260674 | Pre-XDR-TB | lineage4.1.1 | None | SRR16370443 | MDR-TB | lineage4.1.1 | None | SRR21710673 | Sensitive | lineage4.1.1 | None | ERR4024792 | Sensitive | lineage4.1.1 | None | ERR4813138 | Pre-XDR-TB | lineage4.1.1 | None | SRR21728172 | Sensitive | lineage4.1.1 | None | SRR26112214 | Sensitive | lineage4.1.1 | None | ERR6866820 | Sensitive | lineage4.1.1 | None | SRR26112279 | RR-TB | lineage4.1.1 | None | SRR28393406 | Sensitive | lineage4.1.1 | None | ERR6865869 | Sensitive | lineage4.1.1 | None | ERR4024796 | Sensitive | lineage4.1.1 | None | ERR12117936 | MDR-TB | lineage4.1.1 | None | SRR19241773 | Sensitive | lineage4.1.1 | None | ERR6866325 | Sensitive | lineage4.1.1 | None | ERR4813206 | Pre-XDR-TB | lineage4.1.1 | pe | SRR8698508 | MDR-TB | lineage4.1.1 | None | ERR4812974 | Pre-XDR-TB | lineage4.1.1 | None | SRR10808929 | Sensitive | lineage4.1.1 | None | SRR22528526 | Pre-XDR-TB | lineage4.1.1 | None | ERR6866989 | Sensitive | lineage4.1.1 | None | SRR19276640 | Pre-XDR-TB | lineage4.1.1 | None | SRR22528556 | Sensitive | lineage4.1.1 | None | ERR4178157 | Sensitive | lineage4.1.1 | None | SRR22528580 | Sensitive | lineage4.1.1 | None | ERR11049077 | HR-TB | lineage4.8 | None | SRR29053602 | Sensitive | lineage4.1.1 | None | SRR22528582 | Pre-XDR-TB | lineage4.1.1 | None |
|---|
