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SRA data
Rv1644
- c.564A>C
Drug resistance types
391 Sensitive
4 RR-TB
19 HR-TB
88 MDR-TB
34 Pre-XDR-TB
2 XDR-TB
19 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
524
lineage2.2.1;lineage4.3.3
10
lineage2.2.1;lineage4.3.2
8
lineage2.2.1;lineage4.1.2.1
7
lineage2.2.1;lineage4
3
lineage2.2.1;lineage4.1.1.3
2
lineage2.2.1;lineage4.9
1
lineage2.2.1;lineage4.7
1
lineage2.2.1;lineage4.3.3;lineage4.4.1.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
557
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034751
MDR-TB
lineage2.2.1
pe
ERR1034754
MDR-TB
lineage2.2.1
pe
ERR1034787
Pre-XDR-TB
lineage2.2.1
pe
ERR11083095
Other
lineage2.2.1
None
ERR12118046
HR-TB
lineage2.2.1;lineage4.3.3
None
ERR1213893
RR-TB
lineage2.2.1
pe
ERR13260100
MDR-TB
lineage2.2.1
None
ERR13260110
Pre-XDR-TB
lineage2.2.1
None
ERR13260111
Pre-XDR-TB
lineage2.2.1
None
ERR13260112
Pre-XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 557 entries
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