Rv1694 - c.486C>G
Drug resistance types
3 Sensitive
1 RR-TB
13 HR-TB
58 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 58 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 9 |
| lineage4.3.3;lineage4.3.4.2 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| 1 | |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29050882 | MDR-TB | lineage4.3.4.2 | None | SRR9224931 | MDR-TB | lineage4.3.4.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR13583415 | MDR-TB | lineage4.3.4.2 | None | SRR29051597 | MDR-TB | lineage4.3.4.2 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR13583409 | MDR-TB | lineage4.3.4.2 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR9224961 | MDR-TB | lineage4.3.4.2 | None | SRR13583396 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | None | SRR29051520 | MDR-TB | lineage4.3.4.2 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR2514692 | Other | None | SRR29051234 | MDR-TB | lineage4.3.4.2 | None | SRR29050646 | MDR-TB | lineage4.3.4.2 | None | SRR29050724 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29051267 | MDR-TB | lineage4.3.4.2 | None | SRR29051540 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR29051590 | MDR-TB | lineage4.3.4.2 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR9224979 | MDR-TB | lineage4.3.4.2 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR13583368 | MDR-TB | lineage4.3.4.2 | None | SRR13583350 | MDR-TB | lineage4.3.4.2 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR29051336 | MDR-TB | lineage4.3.4.2 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR9224974 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR29051275 | MDR-TB | lineage4.3.4.2 | None | SRR29050747 | MDR-TB | lineage4.3.4.2 | None | SRR9224982 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29051366 | MDR-TB | lineage4.3.4.2 | None | SRR29341605 | Sensitive | lineage4.3.4.2 | None | SRR13583435 | MDR-TB | lineage4.3.4.2 | None | ERR2653202 | RR-TB | lineage4.3.4.2 | None | SRR29051013 | MDR-TB | lineage4.3.4.2 | None | SRR9224976 | MDR-TB | lineage4.3.4.2 | None | SRR9224929 | MDR-TB | lineage4.3.4.2 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR9224991 | MDR-TB | lineage4.3.4.2 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | SRR29051260 | MDR-TB | lineage4.3.4.2 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR9224944 | MDR-TB | lineage4.3.4.2 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR29050701 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR13583418 | MDR-TB | lineage4.3.4.2 | None | SRR29050908 | MDR-TB | lineage4.3.4.2 | None | SRR29051273 | MDR-TB | lineage4.3.4.2 | None | SRR29051297 | MDR-TB | lineage4.3.4.2 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR9224934 | MDR-TB | lineage4.3.4.2 | None | SRR29051358 | MDR-TB | lineage4.3.4.2 | None | SRR9224909 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR13583372 | MDR-TB | lineage4.3.4.2 | None | SRR13583488 | MDR-TB | lineage4.3.4.2 | None | SRR29051491 | MDR-TB | lineage4.3.4.2 | None | SRR29050864 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | None | SRR9224925 | MDR-TB | lineage4.3.4.2 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR13583427 | MDR-TB | lineage4.3.4.2 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR3675441 | Other | lineage4.9 | None | SRR9225004 | MDR-TB | lineage4.3.4.2 | None | SRR9224978 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR9224984 | MDR-TB | lineage4.3.4.2 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR13583383 | MDR-TB | lineage4.3.4.2 | None | SRR9224926 | MDR-TB | lineage4.3.4.2 | None | SRR29050711 | MDR-TB | lineage4.3.4.2 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR11050879 | Sensitive | lineage4.3.4.2 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR9224916 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29051515 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR8866493 | Sensitive | lineage4.3.4.2 | None | SRR29050730 | MDR-TB | lineage4.3.4.2 | None | SRR29051226 | MDR-TB | lineage4.3.4.2 | None | SRR29050706 | MDR-TB | lineage4.3.4.2 | None | SRR13583476 | MDR-TB | lineage4.3.4.2 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None |
|---|
