Rv1854c - c.1092C>T
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
191 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 189 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 195 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5216705 | Other | La1.8.1 | None | SRR5216791 | Other | La1.8.1 | None | SRR5216808 | Other | La1.8.1 | None | SRR5216848 | Other | La1.8.1 | None | SRR5216904 | Other | La1.8.1 | None | SRR7617712 | Other | La1.8.1 | None | SRR7617816 | Other | La1.8.1 | None | ERR564449 | Other | La1.8.1 | None | SRR5216939 | Other | La1.8.1 | None | SRR5216950 | Other | La1.8.1 | None | SRR5216716 | Other | La1.8.1 | None | ERR564465 | Other | La1.8.1 | None | SRR7617485 | Other | La1.8.1 | None | SRR5216801 | Other | La1.8.1 | None | SRR5216831 | Other | La1.8.1 | None | SRR5216946 | Other | La1.8.1 | None | SRR5216714 | Other | La1.8.1 | None | SRR5216944 | Other | La1.8.1 | None | ERR564374 | Other | La1.8.1 | None | SRR5216832 | Other | La1.8.1 | None | SRR5216971 | Other | La1.8.1 | None | ERR564439 | Other | La1.8.1 | None | SRR5216828 | Other | La1.8.1 | None | SRR5216875 | Other | La1.8.1 | None | ERR564386 | Other | La1.8.1 | None | SRR7617556 | Other | La1.8.1 | None | SRR7617734 | Other | La1.8.1 | None | ERR564367 | Other | La1.8.1 | None | SRR7617811 | Other | La1.8.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR7617602 | Other | La1.8.1 | None | SRR7617549 | Other | La1.8.1 | None | SRR5216962 | Other | La1.8.1 | None | SRR5216975 | Other | La1.8.1 | None | ERR564419 | Other | La1.8.1 | None | ERR564426 | Other | La1.8.1 | None | SRR5216790 | Other | La1.8.1 | None | SRR5216918 | Other | La1.8.1 | None | SRR7617582 | Other | La1.8.1 | None | SRR7617713 | Other | La1.8.1 | None | SRR7617854 | Other | La1.8.1 | None | SRR7617675 | Other | La1.8.1 | None | SRR5216886 | Other | La1.8.1 | None | SRR5216733 | Other | La1.8.1 | None | SRR5216933 | Other | La1.8.1 | None | SRR5216938 | Other | La1.8.1 | None | SRR7617611 | Other | La1.8.1 | None | SRR5216761 | Other | La1.8.1 | None | SRR5216899 | Other | La1.8.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR7617840 | Other | La1.8.1 | None | SRR5216890 | Other | La1.8.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR564371 | Other | La1.8.1 | None | SRR7617400 | Other | La1.8.1 | None | SRR7617736 | Other | La1.8.1 | None | SRR5216752 | Other | La1.8.1 | None | SRR5216723 | Other | La1.8.1 | None | SRR7617751 | Other | La1.8.1 | None | ERR564451 | Other | La1.8.1 | None | ERR564456 | Other | La1.8.1 | None | ERR564458 | Other | La1.8.1 | None | ERR564463 | Other | La1.8.1 | None | ERR564436 | Other | La1.8.1 | None | SRR7617730 | Other | La1.8.1 | None | ERR564393 | Other | La1.8.1 | None | ERR564388 | Other | La1.8.1 | None | SRR7617361 | Other | La1.8.1 | None | SRR7617610 | Other | La1.8.1 | None | SRR7617538 | Other | La1.8.1 | None | SRR7617853 | Other | La1.8.1 | None | SRR7617584 | Other | La1.8.1 | None | SRR7617852 | Other | La1.8.1 | None | ERR564381 | Other | La1.8.1 | None | SRR5216827 | Other | La1.8.1 | None | SRR5216708 | Other | La1.8.1 | None | SRR5216833 | Other | La1.8.1 | None | ERR564385 | Other | La1.8.1 | None | ERR564404 | Other | La1.8.1 | None | ERR564453 | Other | La1.8.1 | None | ERR564467 | Other | La1.8.1 | None | ERR564440 | Other | La1.8.1 | None | SRR5216885 | Other | La1.8.1 | None | ERR564429 | Other | La1.8.1 | None | ERR564406 | Other | La1.8.1 | None | SRR5216921 | Other | La1.8.1 | None | ERR564415 | Other | La1.8.1 | None | SRR5216762 | Other | La1.8.1 | None | SRR5216807 | Other | La1.8.1 | None | ERR564437 | Other | La1.8.1 | None | SRR7617855 | Other | La1.8.1 | None | ERR564433 | Other | La1.8.1 | None | SRR5216925 | Other | La1.8.1 | None | SRR5216703 | Other | La1.8.1 | None | SRR5216732 | Other | La1.8.1 | None | SRR7617461 | Other | La1.8.1 | None | SRR7617554 | Other | La1.8.1 | None | ERR564395 | Other | La1.8.1 | None | ERR564398 | Other | La1.8.1 | None | ERR564454 | Other | La1.8.1 | None | ERR564457 | Other | La1.8.1 | None | SRR7617859 | Other | La1.8.1 | None | SRR5216851 | Other | La1.8.1 | None | SRR5216820 | Other | La1.8.1 | None | ERR564369 | Other | La1.8.1 | None | ERR564446 | Other | La1.8.1 | None | ERR564411 | Other | La1.8.1 | None | ERR564400 | Other | La1.8.1 | None | SRR5216712 | Other | La1.8.1 | None | SRR7617750 | Other | La1.8.1 | None | SRR5216722 | Other | La1.8.1 | None | SRR7617856 | Other | La1.8.1 | None | SRR5216738 | Other | La1.8.1 | None | SRR5216826 | Other | La1.8.1 | None | SRR5216837 | Other | La1.8.1 | None | SRR7617732 | Other | La1.8.1 | None | SRR5216844 | Other | La1.8.1 | None | SRR5216760 | Other | La1.8.1 | None | SRR5216811 | Other | La1.8.1 | None | SRR5216871 | Other | La1.8.1 | None | SRR7617749 | Other | La1.8.1 | None | SRR7617810 | Other | La1.8.1 | None | ERR564443 | Other | La1.8.1 | None | ERR564421 | Other | La1.8.1 | None | ERR564373 | Other | La1.8.1 | None | ERR564366 | Other | La1.8.1 | None | ERR564413 | Other | La1.8.1 | None | ERR564390 | Other | La1.8.1 | None | ERR564418 | Other | La1.8.1 | None | ERR564464 | Other | La1.8.1 | None | SRR5216927 | Other | La1.8.1 | None | ERR564441 | Other | La1.8.1 | None | SRR5216767 | Other | La1.8.1 | None | SRR7617857 | Other | La1.8.1 | None | SRR7617391 | Other | La1.8.1 | None | ERR564469 | Other | La1.8.1 | None | ERR564466 | Other | La1.8.1 | None | ERR564383 | Other | La1.8.1 | None | SRR5216786 | Other | La1.8.1 | None | SRR5216817 | Other | La1.8.1 | None | SRR5216836 | Other | La1.8.1 | None | ERR564461 | Other | La1.8.1 | None | SRR7617551 | Other | La1.8.1 | None | ERR564448 | Other | La1.8.1 | None | SRR5216859 | Other | La1.8.1 | None | SRR7617858 | Other | La1.8.1 | None | SRR5216957 | Other | La1.8.1 | None | SRR5216771 | Other | La1.8.1 | None | ERR564375 | Other | La1.8.1 | None | ERR564407 | Other | La1.8.1 | None | ERR564410 | Other | La1.8.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR564424 | Other | La1.8.1 | None | SRR7617399 | Other | La1.8.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR564379 | Other | La1.8.1 | None | ERR564409 | Other | La1.8.1 | None | ERR564455 | Other | La1.8.1 | None | ERR564462 | Other | La1.8.1 | None | SRR5216878 | Other | La1.8.1 | None | ERR564434 | Other | La1.8.1 | None | SRR5216849 | Other | La1.8.1 | None | SRR7617553 | Other | La1.8.1 | None | SRR5216782 | Other | La1.8.1 | None | SRR5216852 | Other | La1.8.1 | None | ERR564394 | Other | La1.8.1 | None | ERR564423 | Other | La1.8.1 | None | ERR564450 | Other | La1.8.1 | None | ERR564427 | Other | La1.8.1 | None | SRR5216824 | Other | La1.8.1 | None | SRR5216695 | Other | La1.8.1 | None | ERR564442 | Other | La1.8.1 | None | ERR564368 | Other | La1.8.1 | None | ERR564378 | Other | La1.8.1 | None | SRR5216755 | Other | La1.8.1 | None | SRR5216747 | Other | La1.8.1 | None | ERR564391 | Other | La1.8.1 | None | ERR564422 | Other | La1.8.1 | None | ERR564468 | Other | La1.8.1 | None | ERR564377 | Other | La1.8.1 | None | SRR7617552 | Other | La1.8.1 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR7617748 | Other | La1.8.1 | None | ERR564372 | Other | La1.8.1 | None | ERR564401 | Other | La1.8.1 | None | ERR564425 | Other | La1.8.1 | None | ERR564403 | Other | La1.8.1 | None | ERR564430 | Other | La1.8.1 | None | SRR7617737 | Other | La1.8.1 | None | ERR564432 | Other | La1.8.1 | None | ERR564428 | Other | La1.8.1 | None | ERR564459 | Other | La1.8.1 | None | SRR5216750 | Other | La1.8.1 | None | ERR564397 | Other | La1.8.1 | None | SRR7617860 | Other | La1.8.1 | None |
|---|
