Rv1908c - p.Ala109Thr
Drug resistance types
6 Sensitive
1 RR-TB
15 HR-TB
37 MDR-TB
36 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 63 |
| lineage2.2.1;lineage4.1.2.1 | 2 |
| lineage3.1.2 | 2 |
| lineage4.3.2 | 4 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.1 | 6 |
| lineage3 | 3 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1;lineage4.3.4.1 | 1 |
| lineage4.5 | 6 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.3.4 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR067593 | Pre-XDR-TB | lineage2.2.1 | ru | SRR14782666 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR1162765 | Pre-XDR-TB | lineage2.2.1 | None | SRR16100247 | Other | lineage3.1.2 | None | SRR6832374 | MDR-TB | lineage2.2.1 | None | SRR5153718 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165377 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865577 | MDR-TB | lineage2.2.1 | None | SRR14782089 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR11081755 | MDR-TB | lineage2.2.1 | None | ERR2516404 | Pre-XDR-TB | lineage4.3.2 | pe | SRR1165550 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166919 | Pre-XDR-TB | lineage2.2.1 | None | SRR11033686 | MDR-TB | lineage2.2.1 | None | ERR11243575 | MDR-TB | lineage2.2.1 | None | SRR22424918 | RR-TB | lineage3.1.2 | None | ERR9029852 | Sensitive | lineage4.1.2.1 | None | SRR16088462 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866279 | MDR-TB | lineage2.2.1 | None | SAMEA5569971 | MDR-TB | lineage4.3.4.1 | None | ERR5865855 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256255 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865856 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498483 | HR-TB | lineage2.2.1 | None | SRR28393942 | Pre-XDR-TB | lineage4.3.2 | None | SRR28498373 | HR-TB | lineage2.2.1 | None | ERR5865731 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458430 | MDR-TB | lineage2.2.1 | None | SRR671796 | Pre-XDR-TB | lineage2.2.1 | cn | ERR270687 | HR-TB | lineage3 | None | SRR18213901 | HR-TB | lineage3 | None | SRR21277727 | Sensitive | lineage4.4.2 | None | ERR5866430 | MDR-TB | lineage2.2.1 | None | SRR7516330 | MDR-TB | lineage2.2.1 | None | ERR11043560 | MDR-TB | lineage2.2.1 | None | SRR18715190 | MDR-TB | lineage2.2.1 | None | SRR1162812 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866280 | MDR-TB | lineage2.2.1 | None | ERR3287605 | HR-TB | lineage4.1.2.1;lineage4.3.4.1 | None | SRR19276629 | MDR-TB | lineage4.3.4.1 | None | ERR7911384 | MDR-TB | lineage2.2.1 | us | ERR4831000 | MDR-TB | lineage2.2.1 | de | ERR11044138 | Pre-XDR-TB | lineage4.5 | None | ERR5865552 | MDR-TB | lineage2.2.1 | None | ERR6866858 | Sensitive | lineage4.1.2.1 | None | SRR1166878 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865905 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207064 | Pre-XDR-TB | lineage2.2.1 | None | SRR24222954 | Pre-XDR-TB | lineage2.2.1 | None | SRR2099977 | HR-TB | lineage3 | None | ERR3287777 | MDR-TB | lineage4.3.4.1;lineage4.9 | None | ERR9029846 | MDR-TB | lineage4.3.4.1 | None | SRR23310908 | MDR-TB | lineage2.2.1 | None | ERR8773928 | HR-TB | lineage2.2.1 | None | ERR3639758 | MDR-TB | lineage2.2.1 | None | SRR28393257 | MDR-TB | lineage4.3.4.1 | None | SRR28393275 | MDR-TB | lineage4.3.4.1 | None | ERR11773825 | Pre-XDR-TB | lineage2.2.1 | None | ERR144631 | MDR-TB | lineage2.2.1 | ru | SRR7652975 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910853 | MDR-TB | lineage4.3.4.1 | pe | SRR1165490 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA5569798 | Sensitive | lineage4.1.2.1;lineage4.3.4 | None | ERR7911420 | MDR-TB | lineage2.2.1 | us | SRR18693856 | HR-TB | lineage1.2.2.2 | None | ERR133852 | MDR-TB | lineage2.2.1 | ru | SRR22251534 | HR-TB | lineage2.2.2 | None | SRR18714857 | MDR-TB | lineage2.2.1 | None | DRR473961 | Sensitive | lineage2.2.1 | None | SRR1167114 | Pre-XDR-TB | lineage2.2.1 | None | ERR228032 | MDR-TB | lineage2.2.1 | ru | ERR6866640 | Sensitive | lineage4.1.2.1 | None | ERR2516409 | Pre-XDR-TB | lineage4.3.2 | pe | SAMN02414975 | Pre-XDR-TB | lineage2.2.1 | se | ERR5865732 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715342 | MDR-TB | lineage2.2.1 | None | ERR5866431 | MDR-TB | lineage2.2.1 | None | ERR5865859 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773927 | HR-TB | lineage2.2.1 | None | ERR067722 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2516704 | Pre-XDR-TB | lineage4.3.2 | pe | ERR10762267 | MDR-TB | lineage2.2.1 | None | ERR11069033 | MDR-TB | lineage4.8 | None | ERR3335771 | Pre-XDR-TB | lineage4.5 | pk | ERR5897104 | Pre-XDR-TB | lineage4.5 | None | ERR5897112 | Pre-XDR-TB | lineage4.5 | None | ERR5897118 | Pre-XDR-TB | lineage4.5 | None | ERR11043561 | MDR-TB | lineage2.2.1 | None | ERR5866278 | MDR-TB | lineage2.2.1 | None | ERR5865576 | MDR-TB | lineage2.2.1 | None | SAMN02414984 | Pre-XDR-TB | lineage2.2.1 | se | ERR11050660 | HR-TB | lineage2.2.1 | None | ERR4827755 | HR-TB | lineage2.2.1 | None | ERR5866536 | HR-TB | lineage2.2.1 | None | SRR7516337 | MDR-TB | lineage2.2.1 | None | ERR11044144 | Pre-XDR-TB | lineage4.5 | None |
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