Rv1908c - p.Ala379Val
Drug resistance types
0 Sensitive
0 RR-TB
20 HR-TB
13 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 4 |
| lineage4.3.4.1 | 2 |
| lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| La1.8;lineage4.3.2 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage2.2.2 | 2 |
| lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage2.2.1 | 7 |
| La1.7;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.2;lineage4.4.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23862053 | HR-TB | lineage4.3.3 | None | ERR4812825 | MDR-TB | lineage4.3.4.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6930892 | Pre-XDR-TB | La1.8;lineage4.3.2 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR29093120 | XDR-TB | lineage2.2.2 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR18665444 | MDR-TB | lineage4.1.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR29385365 | MDR-TB | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR29385275 | Pre-XDR-TB | lineage2.2.1 | None | SRR30182513 | HR-TB | lineage1.2.1.2.1 | None | SRR29093955 | XDR-TB | lineage2.2.2 | None | SRR29093366 | XDR-TB | lineage2.2.2;lineage4.4.2 | None | SRR28239662 | HR-TB | lineage4.3.3 | None | SRR18715291 | HR-TB | lineage4.3.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR13275937 | HR-TB | lineage4.2.1 | None | SRR18715292 | HR-TB | lineage4.3.3 | None | ERR10610134 | MDR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR13423584 | Pre-XDR-TB | lineage2.2.1 | None | ERR718318 | HR-TB | lineage1.1.1 | th | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR26400044 | HR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR12142424 | Pre-XDR-TB | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4830382 | HR-TB | lineage2.2.1 | vn | ERR4812951 | MDR-TB | lineage4.3.4.1 | pe | ERR9119286 | HR-TB | lineage2.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR12416838 | MDR-TB | lineage4.8 | None |
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