lineage | Count |
---|---|
lineage4.1.2.1 | 6 |
lineage2.2.1 | 5 |
3 | |
lineage3 | 2 |
lineage4 | 2 |
lineage4.2.1 | 1 |
lineage4.9 | 3 |
lineage4.3.3 | 2 |
lineage4.8;lineage4.5 | 1 |
lineage1.1.2 | 3 |
lineage4.8 | 7 |
lineage4.1.1 | 2 |
lineage4.6.1.2 | 4 |
lineage4.3.4.2 | 1 |
lineage4.1.3 | 1 |
lineage4.2.2.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.3.4.1 | 2 |
spoligotype | Count |
---|---|
None | 47 |
ID | Drug resistance | Lineage | Country iso2 | ERR4817388 | HR-TB | lineage4.1.2.1 | None | SRR6797542 | MDR-TB | lineage2.2.1 | None | SRR5485531 | HR-TB | None | SRR5341283 | Pre-XDR-TB | lineage3 | None | ERR3148189 | MDR-TB | lineage4.1.2.1 | mx | SRR5485473 | HR-TB | None | SRR413214 | MDR-TB | lineage2.2.1 | None | ERR2229819 | HR-TB | lineage4 | None | SRR413216 | MDR-TB | lineage2.2.1 | None | ERR4827581 | HR-TB | lineage4.2.1 | None | ERR4822359 | Pre-XDR-TB | lineage4.9 | None | ERR2707145 | MDR-TB | lineage4.3.3 | cd | ERR2707167 | MDR-TB | lineage4.3.3 | cd | ERR4830157 | HR-TB | lineage4.8;lineage4.5 | None | ERR5865571 | MDR-TB | lineage4.1.2.1 | None | ERR3132084 | MDR-TB | lineage1.1.2 | None | SRR6484891 | HR-TB | lineage4.8 | None | SRR6485003 | HR-TB | lineage2.2.1 | None | ERR3077937 | MDR-TB | lineage1.1.2 | None | ERR4972490 | MDR-TB | lineage4.1.2.1 | None | SRR9613556 | MDR-TB | lineage4.1.2.1 | None | ERR1035269 | MDR-TB | lineage4.1.1 | br | SRR7535075 | HR-TB | lineage4.6.1.2 | None | DRR130118 | Pre-XDR-TB | lineage4.9 | None | ERR1034665 | MDR-TB | lineage4.8 | bg | ERR1035354 | MDR-TB | lineage4.1.1 | br | ERR4553481 | Pre-XDR-TB | None | ERR1035358 | Pre-XDR-TB | lineage4.3.4.2 | br | ERR1199135 | HR-TB | lineage4.6.1.2 | ug | ERR10680098 | MDR-TB | lineage4.1.3 | None | ERR4800385 | MDR-TB | lineage1.1.2 | None | ERR4797166 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR987704 | HR-TB | lineage4.6.1.2 | None | ERR5917994 | MDR-TB | lineage4.3.2.1 | za | SRR10033118 | HR-TB | lineage4 | None | ERR987703 | HR-TB | lineage4.6.1.2 | None | SRR10305662 | Pre-XDR-TB | lineage2.2.1 | None | SRR12212959 | HR-TB | lineage4.9 | None | SRR13583407 | HR-TB | lineage4.3.4.1 | None | SRR13583345 | MDR-TB | lineage4.3.4.1 | None | SRR13583504 | MDR-TB | lineage4.1.2.1 | None | SRR15661607 | MDR-TB | lineage4.8 | None | SRR15399237 | HR-TB | lineage4.8 | None | SRR22424737 | MDR-TB | lineage3 | None | SRR18593215 | Pre-XDR-TB | lineage4.8 | None | ERR11081218 | MDR-TB | lineage4.8 | None | ERR11082673 | MDR-TB | lineage4.8 | None |
---|