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SRA data
Rv1979c
- c.42G>A
Drug resistance types
208 Sensitive
3 RR-TB
23 HR-TB
134 MDR-TB
25 Pre-XDR-TB
1 XDR-TB
16 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.4.1
396
lineage4.3.3;lineage4.3.4.1
4
lineage2.2.1;lineage4.3.4.1
3
lineage4.1.2.1;lineage4.3.4.1
2
lineage4.1;lineage4.3.4.1
1
lineage4.1.2;lineage4.3.4.1;lineage4.8
1
lineage2.2.1.1;lineage4.3.4.1
1
lineage4.3.4.1;lineage4.8
1
lineage4.3.4.1;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
410
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130087
Pre-XDR-TB
lineage4.3.4.1
None
DRR130088
Pre-XDR-TB
lineage4.3.4.1
None
DRR130089
Pre-XDR-TB
lineage4.3.4.1
None
DRR130090
Pre-XDR-TB
lineage4.3.4.1
None
DRR130187
Pre-XDR-TB
lineage4.3.4.1
None
DRR130188
Pre-XDR-TB
lineage4.3.4.1
None
ERR067693
Sensitive
lineage4.3.4.1
ru
ERR1034621
Other
lineage4.3.4.1
br
ERR1034622
Other
lineage4.3.4.1
br
ERR1034623
Other
lineage4.3.4.1
br
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