Rv1979c - c.42G>A
Drug resistance types
165 Sensitive
4 RR-TB
16 HR-TB
96 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1;lineage4.1.2.1 | 2 |
| lineage4.3.4.1 | 292 |
| 1 | |
| lineage4.3.4.1;lineage2.2.1 | 1 |
| lineage4.3.4 | 3 |
| lineage4 | 3 |
| lineage4.8;lineage4.3.4.1;lineage4.1.2 | 1 |
| lineage4.3.4.1;lineage4.1 | 1 |
| lineage4.3.4.1;lineage2.2.1.1 | 1 |
| lineage4.3.4.1;lineage4.3.3 | 4 |
| lineage4.9;lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 310 |
Geographic prevalence
Country level data for this variant is available for 77 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23310991 | Sensitive | lineage4.3.4.1;lineage4.1.2.1 | None | SRR23311032 | Sensitive | lineage4.3.4.1 | None | ERR2516500 | MDR-TB | lineage4.3.4.1 | pe | SRR23339988 | Sensitive | lineage4.3.4.1 | None | SRR23340047 | Sensitive | lineage4.3.4.1 | None | ERR2446552 | Sensitive | lineage4.3.4.1 | nl | ERR278542 | Sensitive | lineage4.3.4.1 | None | SRR5266554 | Sensitive | lineage4.3.4.1 | ru | ERR2516679 | MDR-TB | lineage4.3.4.1 | nl | ERR2516699 | Pre-XDR-TB | lineage4.3.4.1 | pe | ERR2516493 | MDR-TB | lineage4.3.4.1 | pe | ERR2516636 | MDR-TB | lineage4.3.4.1 | pe | SRR6485163 | Sensitive | lineage4.3.4.1 | None | ERR2517614 | Sensitive | lineage4.3.4.1 | nl | ERR4811725 | MDR-TB | lineage4.3.4.1 | pe | SRR6511629 | Sensitive | None | ERR2510138 | MDR-TB | lineage4.3.4.1 | pe | ERR2510218 | MDR-TB | lineage4.3.4.1 | pe | ERR2510154 | MDR-TB | lineage4.3.4.1 | pe | ERR2510215 | MDR-TB | lineage4.3.4.1 | pe | ERR4813394 | MDR-TB | lineage4.3.4.1 | pe | ERR4813409 | MDR-TB | lineage4.3.4.1 | pe | ERR4813471 | MDR-TB | lineage4.3.4.1 | pe | ERR4813460 | MDR-TB | lineage4.3.4.1 | pe | ERR2503567 | Sensitive | lineage4.3.4.1 | fi | ERR4813473 | MDR-TB | lineage4.3.4.1 | pe | ERR4812989 | MDR-TB | lineage4.3.4.1 | pe | ERR4812893 | MDR-TB | lineage4.3.4.1 | pe | SRR6832392 | Sensitive | lineage4.3.4.1 | None | SRR6832175 | Sensitive | lineage4.3.4.1;lineage2.2.1 | None | ERR2503443 | Sensitive | lineage4.3.4.1 | fi | ERR4812377 | Sensitive | lineage4.3.4.1 | pe | SRR6832836 | Other | lineage4.3.4.1 | None | SRR6832620 | Sensitive | lineage4.3.4.1 | None | ERR4813178 | Pre-XDR-TB | lineage4.3.4.1 | pe | ERR4812462 | Sensitive | lineage4.3.4.1 | pe | ERR4812358 | MDR-TB | lineage4.3.4.1 | pe | ERR4811880 | Pre-XDR-TB | lineage4.3.4.1 | pe | ERR4812518 | MDR-TB | lineage4.3.4.1 | pe | ERR3287311 | MDR-TB | lineage4.3.4.1 | pe | ERR3287717 | MDR-TB | lineage4.3.4.1 | pe | ERR3287754 | MDR-TB | lineage4.3.4.1 | pe | ERR3287792 | MDR-TB | lineage4.3.4.1 | pe | ERR3287738 | MDR-TB | lineage4.3.4.1 | pe | ERR3287367 | MDR-TB | lineage4.3.4.1 | pe | ERR3287700 | MDR-TB | lineage4.3.4.1 | pe | ERR2184440 | MDR-TB | lineage4.3.4.1 | pe | ERR3287707 | MDR-TB | lineage4.3.4.1 | pe | ERR2184566 | MDR-TB | lineage4.3.4.1 | pe | ERR2184442 | MDR-TB | lineage4.3.4.1 | pe | SRR7645802 | Sensitive | lineage4.3.4.1 | None | SRR7276714 | Sensitive | lineage4.3.4.1 | None | SRR7517786 | MDR-TB | lineage4.3.4.1 | None | SRR7276685 | Sensitive | lineage4.3.4.1 | None | ERR11067566 | Sensitive | lineage4.3.4.1 | None | SRR7645905 | Sensitive | lineage4.3.4.1 | None | SRR7645812 | Sensitive | lineage4.3.4.1 | None | SRR7645894 | Sensitive | lineage4.3.4.1;lineage4.1.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR7645974 | Other | lineage4.3.4.1 | None | SRR7646021 | Sensitive | lineage4.3.4.1 | None | DRR130088 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR7755698 | Sensitive | lineage4.3.4.1 | None | SRR8866474 | Other | lineage4.3.4 | None | DRR130090 | Pre-XDR-TB | lineage4.3.4.1 | None | DRR130089 | Pre-XDR-TB | lineage4.3.4.1 | None | DRR130087 | Pre-XDR-TB | lineage4.3.4.1 | None | DRR130188 | Pre-XDR-TB | lineage4.3.4.1 | None | DRR130187 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR12117898 | MDR-TB | lineage4.3.4.1 | None | ERR10969108 | Sensitive | lineage4.3.4.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR12117969 | MDR-TB | lineage4.3.4.1 | None | ERR10465764 | Sensitive | lineage4.3.4.1 | None | ERR11044185 | HR-TB | lineage4.3.4.1 | None | ERR11043877 | Sensitive | lineage4.3.4.1 | None | ERR12117985 | MDR-TB | lineage4.3.4.1 | None | ERR12117960 | MDR-TB | lineage4.3.4.1 | None | ERR144612 | RR-TB | lineage4.8;lineage4.3.4.1;lineage4.1.2 | None | ERR3287545 | MDR-TB | lineage4.3.4.1 | None | ERR12118058 | MDR-TB | lineage4.3.4.1 | None | ERR4821972 | HR-TB | lineage4.3.4.1 | gb | ERR3287561 | MDR-TB | lineage4.3.4.1 | None | ERR4024876 | Sensitive | lineage4.3.4.1 | None | ERR3287560 | MDR-TB | lineage4.3.4.1 | None | ERR3287576 | HR-TB | lineage4.3.4.1 | None | ERR3287537 | MDR-TB | lineage4.3.4.1 | None | ERR386901 | Sensitive | lineage4.3.4.1 | None | ERR4024679 | Sensitive | lineage4.3.4.1 | None | ERR4195687 | Other | lineage4.3.4.1 | None | ERR4178251 | MDR-TB | lineage4.3.4.1 | None | ERR4195503 | Sensitive | lineage4.3.4.1 | None | ERR144613 | RR-TB | lineage4.3.4.1;lineage4.1 | ru | ERR4407538 | Sensitive | lineage4.3.4.1 | None | ERR4195788 | Sensitive | lineage4.3.4.1 | None | ERR117450 | Sensitive | lineage4.3.4.1 | ru | ERR133977 | HR-TB | lineage4.3.4.1 | ru | ERR4829024 | HR-TB | lineage4.3.4.1 | None | ERR8975630 | Sensitive | lineage4.3.4.1 | None | ERR12118029 | MDR-TB | lineage4.3.4.1 | None | ERR12117904 | MDR-TB | lineage4.3.4.1 | None | ERR12118036 | MDR-TB | lineage4.3.4.1 | None | ERR12118039 | MDR-TB | lineage4.3.4.1 | None | ERR4813978 | RR-TB | lineage4.3.4.1 | br | ERR4812289 | MDR-TB | lineage4.3.4.1 | None | ERR4812105 | HR-TB | lineage4.3.4.1;lineage2.2.1.1 | None | ERR4812270 | MDR-TB | lineage4.3.4.1 | None | ERR137280 | Sensitive | lineage4.3.4.1 | ru | ERR4812320 | MDR-TB | lineage4.3.4 | None | ERR067693 | Sensitive | lineage4.3.4.1 | ru | ERR6544661 | Other | lineage4.3.4.1 | None | ERR6544659 | Other | lineage4.3.4.1 | None | ERR6544660 | Other | lineage4.3.4.1 | None | ERR6865836 | Sensitive | lineage4.3.4.1 | None | ERR6865404 | MDR-TB | lineage4.3.4.1 | None | ERR11049922 | Sensitive | lineage4.3.4.1 | None | ERR6866021 | Sensitive | lineage4.3.4.1 | None | ERR6866442 | MDR-TB | lineage4.3.4.1 | None | ERR6866188 | HR-TB | lineage4.3.4.1 | None | ERR6866260 | MDR-TB | lineage4.3.4.1 | None | ERR6866294 | MDR-TB | lineage4.3.4.1 | None | ERR6866468 | MDR-TB | lineage4.3.4.1 | None | ERR6866457 | HR-TB | lineage4.3.4.1 | None | ERR6879024 | MDR-TB | lineage4.3.4.1 | None | ERR6879025 | MDR-TB | lineage4.3.4.1 | None | ERR6866771 | MDR-TB | lineage4.3.4.1 | None | SRR16088312 | Sensitive | lineage4.3.4.1 | None | ERR6879035 | MDR-TB | lineage4.3.4.1;lineage4.3.3 | None | SRR16915753 | MDR-TB | lineage4.3.4.1 | None | ERR6879039 | MDR-TB | lineage4.3.4.1 | None | ERR9901112 | Sensitive | lineage4.3.4.1 | None | ERR9121384 | Sensitive | lineage4.3.4.1 | None | SRR20958082 | Sensitive | lineage4.9;lineage4.3.4.1 | None | ERR845942 | RR-TB | lineage4 | None | ERR9899657 | Sensitive | lineage4.3.4.1 | None | SRR10379958 | Sensitive | lineage4.3.4.1 | None | SRR10808944 | MDR-TB | lineage4.3.4.1 | None | SRR10380227 | Sensitive | lineage4.3.4.1 | None | SRR10808319 | Sensitive | lineage4.3.4.1 | None | SRR10808572 | MDR-TB | lineage4.3.4.1 | None | SRR10808574 | MDR-TB | lineage4.3.4.1 | None | SRR10808653 | Sensitive | lineage4.3.4.1 | None | SRR10851682 | Other | lineage4.3.4.1 | None | SRR10851634 | Sensitive | lineage4.3.4.1 | None | SRR10851630 | Sensitive | lineage4.3.4.1 | None | SRR10851668 | Sensitive | lineage4.3.4.1 | None | SRR1166133 | Sensitive | lineage4.3.4.1 | None | SRR1166083 | Sensitive | lineage4.3.4.1 | None | SRR1169062 | Sensitive | lineage4.3.4.1 | None | SRR1169023 | Sensitive | lineage4.3.4.1 | None | SRR13591345 | Sensitive | lineage4.3.4.1 | None | SRR13583496 | HR-TB | lineage4.3.4.1 | None | SRR14164820 | Sensitive | lineage4.3.4.1 | None | SRR13591408 | Sensitive | lineage4.3.4.1 | None | SRR14164883 | Sensitive | lineage4.3.4.1 | None | SRR14781964 | Sensitive | lineage4.3.4.1 | None | SRR14781942 | Sensitive | lineage4.3.4.1 | None | SRR14781897 | Sensitive | lineage4.3.4.1 | None | SRR14782022 | Sensitive | lineage4.3.4.1 | None | SRR14781980 | Sensitive | lineage4.3.4.1 | None | SRR14782114 | Sensitive | lineage4.3.4.1 | None | SRR14782332 | Sensitive | lineage4.3.4.1 | None | SRR14782180 | Sensitive | lineage4.3.4.1 | None | SRR14782177 | Sensitive | lineage4.3.4.1 | None | SRR14782392 | Sensitive | lineage4.3.4.1 | None | SRR14782350 | Sensitive | lineage4.3.4.1 | None | SRR14782487 | Sensitive | lineage4.3.4.1 | None | SRR14782409 | Sensitive | lineage4.3.4.1 | None | SRR14782481 | Sensitive | lineage4.3.4.1 | None | SRR14782535 | Sensitive | lineage4.3.4.1 | None | SRR14782504 | Sensitive | lineage4.3.4.1 | None | SRR14782522 | Sensitive | lineage4.3.4.1 | None | SRR14782551 | Sensitive | lineage4.3.4.1 | None | SRR14782717 | Sensitive | lineage4.3.4.1 | None | SRR14782703 | Sensitive | lineage4.3.4.1 | None | SRR14782598 | Sensitive | lineage4.3.4.1 | None | SRR14782637 | HR-TB | lineage4.3.4.1 | None | SRR14782711 | Sensitive | lineage4.3.4.1 | None | SRR14782773 | Sensitive | lineage4.3.4.1 | None | SRR14782770 | Sensitive | lineage4.3.4.1 | None | SRR14782775 | Sensitive | lineage4.3.4.1 | None | SRR14782789 | Sensitive | lineage4.3.4.1 | None | SRR14782821 | Sensitive | lineage4.3.4.1 | None | SRR14782813 | Sensitive | lineage4.3.4.1 | None | SRR14801318 | Sensitive | lineage4.3.4.1 | None | SRR14801288 | Sensitive | lineage4.3.4.1 | None | SRR14801434 | Sensitive | lineage4.3.4.1 | None | SRR14801806 | Sensitive | lineage4.3.4.1 | None | SRR14801469 | Sensitive | lineage4.3.4.1 | None | SRR14801547 | Sensitive | lineage4.3.4.1 | None | SRR14801617 | Sensitive | lineage4.3.4.1 | None | SRR14801475 | Sensitive | lineage4.3.4.1 | None | SRR14801613 | Sensitive | lineage4.3.4.1 | None | SRR14801738 | Sensitive | lineage4.3.4.1 | None | SRR14801942 | Sensitive | lineage4.3.4.1 | None | SRR14801938 | Sensitive | lineage4.3.4.1 | None | SRR14802013 | Sensitive | lineage4.3.4.1 | None | SRR14801953 | Sensitive | lineage4.3.4.1 | None | SRR14802025 | Sensitive | lineage4.3.4.1 | None | SRR14802057 | Sensitive | lineage4.3.4.1 | None | SRR14802173 | Sensitive | lineage4.3.4.1 | None | SRR14802120 | Sensitive | lineage4.3.4.1 | None | SRR14802064 | Sensitive | lineage4.3.4.1 | None | SRR14802136 | Sensitive | lineage4.3.4.1 | None | SRR14802283 | Sensitive | lineage4.3.4.1 | None | SRR14807582 | Sensitive | lineage4.3.4.1 | None | SRR14807520 | Sensitive | lineage4.3.4.1 | None | SRR14807641 | Sensitive | lineage4.3.4.1 | None | SRR14807590 | Sensitive | lineage4.3.4.1 | None | ERR11050640 | Sensitive | lineage4.3.4.1 | None | SRR16100232 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR16115871 | HR-TB | lineage4.3.4.1 | None | SRR16100242 | HR-TB | lineage4.3.4.1 | None | SRR16101283 | Sensitive | lineage4.3.4.1 | None | SRR16115881 | Sensitive | lineage4.3.4.1 | None | SRR18714967 | MDR-TB | lineage4.3.4.1;lineage4.3.3 | None | SRR16370468 | MDR-TB | lineage4.3.4.1 | None | SRR16370495 | MDR-TB | lineage4.3.4.1 | None | SRR16370259 | Sensitive | lineage4.3.4.1 | None | SRR18714799 | Sensitive | lineage4.3.4.1 | None | SRR18914178 | Sensitive | lineage4.3.4.1 | None | SRR18912988 | Sensitive | lineage4.3.4.1 | None | SRR18913754 | HR-TB | lineage4.3.4.1 | None | SRR21776302 | Sensitive | lineage4.3.4.1 | None | SRR19158671 | Sensitive | lineage4.3.4.1 | None | SRR19241778 | Sensitive | lineage4.3.4.1 | None | SRR19276595 | MDR-TB | lineage4.3.4.1 | None | SRR19320528 | Sensitive | lineage4.3.4.1 | None | SRR19324974 | Sensitive | lineage4.3.4.1 | None | SRR19318156 | Sensitive | lineage4.3.4.1 | None | SRR19324986 | MDR-TB | lineage4.3.4.1 | None | SRR21658620 | Sensitive | lineage4.3.4.1 | None | SRR21676406 | Sensitive | lineage4.3.4.1 | None | SRR21662819 | Sensitive | lineage4.3.4.1 | None | SRR21675433 | Sensitive | lineage4.3.4.1 | None | SRR21674630 | Sensitive | lineage4.3.4.1 | None | SRR21709844 | Sensitive | lineage4.3.4.1 | None | SRR21676933 | Sensitive | lineage4.3.4.1 | None | SRR21710916 | Sensitive | lineage4.3.4.1 | None | SRR22248490 | Sensitive | lineage4.3.4.1 | None | SRR21722251 | Sensitive | lineage4.3.4.1 | None | SRR21722255 | Sensitive | lineage4.3.4.1 | None | SRR22528575 | MDR-TB | lineage4.3.4.1 | None | SRR22528539 | MDR-TB | lineage4.3.4.1 | None | ERR11080984 | Sensitive | lineage4.3.4.1 | None | SRR22536478 | MDR-TB | lineage4.3.4.1 | None | ERR11081052 | HR-TB | lineage4.3.4.1 | None | SRR24827308 | MDR-TB | lineage4.3.4.1 | None | ERR11082277 | MDR-TB | lineage4.3.4.1 | None | ERR11083003 | HR-TB | lineage4.3.4.1 | None | ERR11082278 | MDR-TB | lineage4.3.4.1 | None | SRR20958138 | Sensitive | lineage4.3.4.1 | None | SRR26397809 | XDR-TB | lineage4.3.4.1 | None | SRR26397810 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR12544150 | Sensitive | lineage4.3.4.1 | None | SRR24827279 | Sensitive | lineage4.3.4.1 | None | SRR26112589 | Sensitive | lineage4.3.4.1 | None | SRR24256212 | Sensitive | lineage4.3.4.1 | None | ERR4813729 | MDR-TB | lineage4.3.4.1 | None | SRR23311046 | Sensitive | lineage4.3.4.1 | None | ERR4813706 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4813715 | MDR-TB | lineage4.3.4.1 | None | ERR4813719 | MDR-TB | lineage4.3.4.1 | None | ERR4813738 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR1034623 | Other | lineage4.3.4.1 | br | ERR1034622 | Other | lineage4.3.4.1 | br | ERR4814062 | Sensitive | lineage4.3.4.1 | None | ERR2199871 | Sensitive | lineage4.3.4.1 | de | ERR1034621 | Other | lineage4.3.4.1 | br | ERR4812827 | MDR-TB | lineage4 | None | ERR4812826 | Other | lineage4.3.4 | None | ERR4813027 | MDR-TB | lineage4.3.4.1 | None | ERR4812907 | MDR-TB | lineage4.3.4.1;lineage4.3.3 | None | ERR4812853 | MDR-TB | lineage4.3.4.1 | None | ERR1034764 | MDR-TB | lineage4.3.4.1 | pe | ERR1034726 | MDR-TB | lineage4.3.4.1 | pe | ERR1034725 | MDR-TB | lineage4.3.4.1 | pe | ERR4813633 | MDR-TB | lineage4.3.4.1 | None | ERR1034752 | HR-TB | lineage4.3.4.1 | pe | ERR1034757 | MDR-TB | lineage4.3.4.1;lineage4.3.3 | pe | SRR3732579 | MDR-TB | lineage4.3.4.1 | None | SRR3743413 | Sensitive | lineage4.3.4.1 | None | ERR2184317 | Sensitive | lineage4.3.4.1 | None | ERR2184369 | Sensitive | lineage4.3.4.1 | None | ERR3275613 | Sensitive | lineage4.3.4.1 | nl | ERR775329 | MDR-TB | lineage4.3.4.1 | pe | ERR1193809 | Sensitive | lineage4.3.4.1 | de | ERR1193813 | Sensitive | lineage4.3.4.1 | ru | SAMN02584603 | Sensitive | lineage4.3.4.1 | md | ERR1193729 | Sensitive | lineage4.3.4.1 | us | ERR845935 | MDR-TB | lineage4.3.4.1 | pe | ERR1193734 | Sensitive | lineage4.3.4.1 | pt | ERR751626 | MDR-TB | lineage4.3.4.1 | pe | ERR751382 | MDR-TB | lineage4.3.4.1 | pe | ERR751541 | MDR-TB | lineage4.3.4.1 | pe | ERR751511 | Sensitive | lineage4.3.4.1 | pe | ERR779878 | MDR-TB | lineage4.3.4.1 | pe | ERR779874 | MDR-TB | lineage4.3.4.1 | pe | ERR1193742 | Sensitive | lineage4.3.4.1 | pt | ERR779848 | MDR-TB | lineage4.3.4.1 | pe | ERR7910865 | MDR-TB | lineage4.3.4.1 | pe | SRR5153847 | Sensitive | lineage4.3.4.1 | None | ERR7910888 | MDR-TB | lineage4.3.4.1 | pe | ERR1193780 | Sensitive | lineage4.3.4.1 | pt | SAMN02584617 | Sensitive | lineage4.3.4.1 | md | SRR5153901 | Other | lineage4.3.4.1 | None | SRR2100929 | Sensitive | lineage4.3.4.1 | None | ERR2516647 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR551312 | Sensitive | lineage4.3.4.1 | de | ERR751456 | MDR-TB | lineage4.3.4.1 | pe |
|---|
