Rv1979c - c.42G>A


Drug resistance types
165 Sensitive 4 RR-TB 16 HR-TB 96 MDR-TB 14 Pre-XDR-TB 1 XDR-TB 14 Other
lineage Counts
lineage Count
lineage4.3.4.1 292
lineage4.3.4.1;lineage4.1 1
lineage4.3.4.1;lineage2.2.1.1 1
lineage4.3.4 3
lineage4.3.4.1;lineage4.3.3 4
lineage4.9;lineage4.3.4.1 1
lineage4 3
lineage4.3.4.1;lineage4.1.2.1 2
1
lineage4.3.4.1;lineage2.2.1 1
lineage4.8;lineage4.3.4.1;lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 310
Geographic prevalence
Country level data for this variant is available for 77 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR386901 Sensitive lineage4.3.4.1 None
ERR4178251 MDR-TB lineage4.3.4.1 None
ERR4024679 Sensitive lineage4.3.4.1 None
ERR4024876 Sensitive lineage4.3.4.1 None
ERR4195687 Other lineage4.3.4.1 None
ERR4195503 Sensitive lineage4.3.4.1 None
ERR117450 Sensitive lineage4.3.4.1 ru
ERR4195788 Sensitive lineage4.3.4.1 None
ERR4407538 Sensitive lineage4.3.4.1 None
ERR133977 HR-TB lineage4.3.4.1 ru
ERR8975630 Sensitive lineage4.3.4.1 None
ERR144613 RR-TB lineage4.3.4.1;lineage4.1 ru
ERR12117904 MDR-TB lineage4.3.4.1 None
ERR4829024 HR-TB lineage4.3.4.1 None
ERR12118029 MDR-TB lineage4.3.4.1 None
ERR4813978 RR-TB lineage4.3.4.1 br
ERR12118036 MDR-TB lineage4.3.4.1 None
ERR12118039 MDR-TB lineage4.3.4.1 None
ERR4812270 MDR-TB lineage4.3.4.1 None
ERR4812105 HR-TB lineage4.3.4.1;lineage2.2.1.1 None
ERR067693 Sensitive lineage4.3.4.1 ru
ERR4812320 MDR-TB lineage4.3.4 None
ERR4812289 MDR-TB lineage4.3.4.1 None
ERR137280 Sensitive lineage4.3.4.1 ru
ERR6544659 Other lineage4.3.4.1 None
ERR6865836 Sensitive lineage4.3.4.1 None
ERR6544661 Other lineage4.3.4.1 None
ERR6865404 MDR-TB lineage4.3.4.1 None
ERR6544660 Other lineage4.3.4.1 None
ERR6866442 MDR-TB lineage4.3.4.1 None
ERR6866021 Sensitive lineage4.3.4.1 None
ERR6866188 HR-TB lineage4.3.4.1 None
ERR6866260 MDR-TB lineage4.3.4.1 None
ERR6866294 MDR-TB lineage4.3.4.1 None
ERR11049922 Sensitive lineage4.3.4.1 None
ERR6866468 MDR-TB lineage4.3.4.1 None
ERR6866771 MDR-TB lineage4.3.4.1 None
ERR6866457 HR-TB lineage4.3.4.1 None
ERR6879035 MDR-TB lineage4.3.4.1;lineage4.3.3 None
ERR6879024 MDR-TB lineage4.3.4.1 None
SRR16088312 Sensitive lineage4.3.4.1 None
ERR6879039 MDR-TB lineage4.3.4.1 None
ERR6879025 MDR-TB lineage4.3.4.1 None
SRR20958082 Sensitive lineage4.9;lineage4.3.4.1 None
SRR16915753 MDR-TB lineage4.3.4.1 None
ERR845942 RR-TB lineage4 None
ERR9901112 Sensitive lineage4.3.4.1 None
ERR9121384 Sensitive lineage4.3.4.1 None
SRR10379958 Sensitive lineage4.3.4.1 None
ERR9899657 Sensitive lineage4.3.4.1 None
SRR10851634 Sensitive lineage4.3.4.1 None
SRR10380227 Sensitive lineage4.3.4.1 None
SRR10808319 Sensitive lineage4.3.4.1 None
SRR10808572 MDR-TB lineage4.3.4.1 None
SRR10808574 MDR-TB lineage4.3.4.1 None
SRR10808944 MDR-TB lineage4.3.4.1 None
SRR10808653 Sensitive lineage4.3.4.1 None
SRR10851630 Sensitive lineage4.3.4.1 None
SRR10851668 Sensitive lineage4.3.4.1 None
SRR1169062 Sensitive lineage4.3.4.1 None
SRR10851682 Other lineage4.3.4.1 None
SRR1166083 Sensitive lineage4.3.4.1 None
SRR1166133 Sensitive lineage4.3.4.1 None
SRR1169023 Sensitive lineage4.3.4.1 None
SRR13583496 HR-TB lineage4.3.4.1 None
SRR13591408 Sensitive lineage4.3.4.1 None
SRR13591345 Sensitive lineage4.3.4.1 None
SRR14782022 Sensitive lineage4.3.4.1 None
SRR14164820 Sensitive lineage4.3.4.1 None
SRR14164883 Sensitive lineage4.3.4.1 None
SRR14781897 Sensitive lineage4.3.4.1 None
SRR14781964 Sensitive lineage4.3.4.1 None
SRR14781980 Sensitive lineage4.3.4.1 None
SRR14781942 Sensitive lineage4.3.4.1 None
SRR14782114 Sensitive lineage4.3.4.1 None
SRR14782180 Sensitive lineage4.3.4.1 None
SRR14782177 Sensitive lineage4.3.4.1 None
SRR14782350 Sensitive lineage4.3.4.1 None
SRR14782332 Sensitive lineage4.3.4.1 None
SRR14782392 Sensitive lineage4.3.4.1 None
SRR14782522 Sensitive lineage4.3.4.1 None
SRR14782487 Sensitive lineage4.3.4.1 None
SRR14782409 Sensitive lineage4.3.4.1 None
SRR14782481 Sensitive lineage4.3.4.1 None
SRR14782504 Sensitive lineage4.3.4.1 None
SRR14782551 Sensitive lineage4.3.4.1 None
SRR14782535 Sensitive lineage4.3.4.1 None
SRR14782598 Sensitive lineage4.3.4.1 None
SRR14782637 HR-TB lineage4.3.4.1 None
SRR14782717 Sensitive lineage4.3.4.1 None
SRR14782703 Sensitive lineage4.3.4.1 None
SRR14782711 Sensitive lineage4.3.4.1 None
SRR14782775 Sensitive lineage4.3.4.1 None
SRR14782773 Sensitive lineage4.3.4.1 None
SRR14782770 Sensitive lineage4.3.4.1 None
SRR14782813 Sensitive lineage4.3.4.1 None
SRR14782789 Sensitive lineage4.3.4.1 None
SRR14801434 Sensitive lineage4.3.4.1 None
SRR14782821 Sensitive lineage4.3.4.1 None
SRR14801318 Sensitive lineage4.3.4.1 None
SRR14801288 Sensitive lineage4.3.4.1 None
SRR14801938 Sensitive lineage4.3.4.1 None
SRR14801475 Sensitive lineage4.3.4.1 None
SRR14801617 Sensitive lineage4.3.4.1 None
SRR14801806 Sensitive lineage4.3.4.1 None
SRR14801469 Sensitive lineage4.3.4.1 None
SRR14801547 Sensitive lineage4.3.4.1 None
SRR14801613 Sensitive lineage4.3.4.1 None
SRR14801738 Sensitive lineage4.3.4.1 None
SRR14801953 Sensitive lineage4.3.4.1 None
SRR14801942 Sensitive lineage4.3.4.1 None
SRR14802057 Sensitive lineage4.3.4.1 None
SRR14802025 Sensitive lineage4.3.4.1 None
SRR14802064 Sensitive lineage4.3.4.1 None
SRR14802013 Sensitive lineage4.3.4.1 None
SRR14807582 Sensitive lineage4.3.4.1 None
SRR14802136 Sensitive lineage4.3.4.1 None
SRR14802173 Sensitive lineage4.3.4.1 None
SRR14807520 Sensitive lineage4.3.4.1 None
SRR14802120 Sensitive lineage4.3.4.1 None
SRR14802283 Sensitive lineage4.3.4.1 None
SRR14807590 Sensitive lineage4.3.4.1 None
SRR16101283 Sensitive lineage4.3.4.1 None
SRR14807641 Sensitive lineage4.3.4.1 None
ERR11050640 Sensitive lineage4.3.4.1 None
SRR16100242 HR-TB lineage4.3.4.1 None
SRR16100232 Pre-XDR-TB lineage4.3.4.1 None
SRR16115871 HR-TB lineage4.3.4.1 None
SRR18714967 MDR-TB lineage4.3.4.1;lineage4.3.3 None
SRR16115881 Sensitive lineage4.3.4.1 None
SRR16370259 Sensitive lineage4.3.4.1 None
SRR16370468 MDR-TB lineage4.3.4.1 None
SRR16370495 MDR-TB lineage4.3.4.1 None
SRR18714799 Sensitive lineage4.3.4.1 None
SRR18913754 HR-TB lineage4.3.4.1 None
SRR18912988 Sensitive lineage4.3.4.1 None
SRR19241778 Sensitive lineage4.3.4.1 None
SRR18914178 Sensitive lineage4.3.4.1 None
SRR19158671 Sensitive lineage4.3.4.1 None
SRR19320528 Sensitive lineage4.3.4.1 None
SRR19276595 MDR-TB lineage4.3.4.1 None
SRR19318156 Sensitive lineage4.3.4.1 None
SRR19324974 Sensitive lineage4.3.4.1 None
SRR19324986 MDR-TB lineage4.3.4.1 None
SRR21675433 Sensitive lineage4.3.4.1 None
SRR21658620 Sensitive lineage4.3.4.1 None
SRR21674630 Sensitive lineage4.3.4.1 None
SRR21776302 Sensitive lineage4.3.4.1 None
SRR21662819 Sensitive lineage4.3.4.1 None
SRR21676406 Sensitive lineage4.3.4.1 None
ERR11081052 HR-TB lineage4.3.4.1 None
SRR21722251 Sensitive lineage4.3.4.1 None
SRR22528539 MDR-TB lineage4.3.4.1 None
SRR22536478 MDR-TB lineage4.3.4.1 None
SRR21676933 Sensitive lineage4.3.4.1 None
SRR21709844 Sensitive lineage4.3.4.1 None
SRR21710916 Sensitive lineage4.3.4.1 None
SRR21722255 Sensitive lineage4.3.4.1 None
SRR22248490 Sensitive lineage4.3.4.1 None
SRR22528575 MDR-TB lineage4.3.4.1 None
ERR11080984 Sensitive lineage4.3.4.1 None
ERR11082278 MDR-TB lineage4.3.4.1 None
ERR11082277 MDR-TB lineage4.3.4.1 None
SRR20958138 Sensitive lineage4.3.4.1 None
ERR11083003 HR-TB lineage4.3.4.1 None
SRR24827279 Sensitive lineage4.3.4.1 None
SRR24827308 MDR-TB lineage4.3.4.1 None
SRR26397809 XDR-TB lineage4.3.4.1 None
SRR26397810 Pre-XDR-TB lineage4.3.4.1 None
ERR12544150 Sensitive lineage4.3.4.1 None
SRR26112589 Sensitive lineage4.3.4.1 None
SRR23311046 Sensitive lineage4.3.4.1 None
SRR24256212 Sensitive lineage4.3.4.1 None
ERR4813715 MDR-TB lineage4.3.4.1 None
ERR4813706 Pre-XDR-TB lineage4.3.4.1 None
ERR1034621 Other lineage4.3.4.1 br
ERR4813729 MDR-TB lineage4.3.4.1 None
ERR4814062 Sensitive lineage4.3.4.1 None
ERR4813719 MDR-TB lineage4.3.4.1 None
ERR4813738 Pre-XDR-TB lineage4.3.4.1 None
ERR1034622 Other lineage4.3.4.1 br
ERR1034623 Other lineage4.3.4.1 br
ERR4812826 Other lineage4.3.4 None
ERR2199871 Sensitive lineage4.3.4.1 de
ERR4812827 MDR-TB lineage4 None
ERR4812907 MDR-TB lineage4.3.4.1;lineage4.3.3 None
ERR4812853 MDR-TB lineage4.3.4.1 None
ERR4813027 MDR-TB lineage4.3.4.1 None
ERR1034726 MDR-TB lineage4.3.4.1 pe
ERR4813633 MDR-TB lineage4.3.4.1 None
ERR1034757 MDR-TB lineage4.3.4.1;lineage4.3.3 pe
ERR1034752 HR-TB lineage4.3.4.1 pe
ERR1034725 MDR-TB lineage4.3.4.1 pe
ERR2184317 Sensitive lineage4.3.4.1 None
SRR3732579 MDR-TB lineage4.3.4.1 None
ERR1034764 MDR-TB lineage4.3.4.1 pe
ERR3275613 Sensitive lineage4.3.4.1 nl
ERR2184369 Sensitive lineage4.3.4.1 None
SRR3743413 Sensitive lineage4.3.4.1 None
ERR751382 MDR-TB lineage4.3.4.1 pe
ERR1193809 Sensitive lineage4.3.4.1 de
ERR845935 MDR-TB lineage4.3.4.1 pe
ERR1193734 Sensitive lineage4.3.4.1 pt
ERR775329 MDR-TB lineage4.3.4.1 pe
ERR1193813 Sensitive lineage4.3.4.1 ru
ERR1193729 Sensitive lineage4.3.4.1 us
ERR751626 MDR-TB lineage4.3.4.1 pe
ERR779874 MDR-TB lineage4.3.4.1 pe
ERR751541 MDR-TB lineage4.3.4.1 pe
SAMN02584603 Sensitive lineage4.3.4.1 md
ERR779878 MDR-TB lineage4.3.4.1 pe
ERR751511 Sensitive lineage4.3.4.1 pe
ERR779848 MDR-TB lineage4.3.4.1 pe
ERR1193742 Sensitive lineage4.3.4.1 pt
ERR7910865 MDR-TB lineage4.3.4.1 pe
ERR7910888 MDR-TB lineage4.3.4.1 pe
SRR5153847 Sensitive lineage4.3.4.1 None
SRR2100929 Sensitive lineage4.3.4.1 None
SRR5153901 Other lineage4.3.4.1 None
SAMN02584617 Sensitive lineage4.3.4.1 md
ERR1193780 Sensitive lineage4.3.4.1 pt
ERR551312 Sensitive lineage4.3.4.1 de
ERR2516647 Pre-XDR-TB lineage4.3.4.1 None
SRR23339988 Sensitive lineage4.3.4.1 None
SRR23310991 Sensitive lineage4.3.4.1;lineage4.1.2.1 None
ERR751456 MDR-TB lineage4.3.4.1 pe
SRR23311032 Sensitive lineage4.3.4.1 None
SRR23340047 Sensitive lineage4.3.4.1 None
ERR278542 Sensitive lineage4.3.4.1 None
SRR5266554 Sensitive lineage4.3.4.1 ru
ERR2516500 MDR-TB lineage4.3.4.1 pe
ERR2446552 Sensitive lineage4.3.4.1 nl
ERR2516679 MDR-TB lineage4.3.4.1 nl
ERR2516493 MDR-TB lineage4.3.4.1 pe
ERR2516699 Pre-XDR-TB lineage4.3.4.1 pe
SRR6485163 Sensitive lineage4.3.4.1 None
ERR2516636 MDR-TB lineage4.3.4.1 pe
ERR2517614 Sensitive lineage4.3.4.1 nl
ERR4811725 MDR-TB lineage4.3.4.1 pe
SRR6511629 Sensitive None
ERR2510218 MDR-TB lineage4.3.4.1 pe
ERR2510138 MDR-TB lineage4.3.4.1 pe
ERR2510154 MDR-TB lineage4.3.4.1 pe
ERR4813409 MDR-TB lineage4.3.4.1 pe
ERR2510215 MDR-TB lineage4.3.4.1 pe
ERR4813394 MDR-TB lineage4.3.4.1 pe
ERR4812893 MDR-TB lineage4.3.4.1 pe
ERR4813460 MDR-TB lineage4.3.4.1 pe
ERR4813471 MDR-TB lineage4.3.4.1 pe
ERR4813473 MDR-TB lineage4.3.4.1 pe
ERR2503443 Sensitive lineage4.3.4.1 fi
ERR4812989 MDR-TB lineage4.3.4.1 pe
ERR2503567 Sensitive lineage4.3.4.1 fi
ERR4811880 Pre-XDR-TB lineage4.3.4.1 pe
SRR6832392 Sensitive lineage4.3.4.1 None
SRR6832620 Sensitive lineage4.3.4.1 None
SRR6832836 Other lineage4.3.4.1 None
SRR6832175 Sensitive lineage4.3.4.1;lineage2.2.1 None
ERR4813178 Pre-XDR-TB lineage4.3.4.1 pe
ERR4812377 Sensitive lineage4.3.4.1 pe
ERR4812462 Sensitive lineage4.3.4.1 pe
ERR4812518 MDR-TB lineage4.3.4.1 pe
ERR3287754 MDR-TB lineage4.3.4.1 pe
ERR3287717 MDR-TB lineage4.3.4.1 pe
ERR4812358 MDR-TB lineage4.3.4.1 pe
ERR3287311 MDR-TB lineage4.3.4.1 pe
ERR3287792 MDR-TB lineage4.3.4.1 pe
ERR3287738 MDR-TB lineage4.3.4.1 pe
ERR3287700 MDR-TB lineage4.3.4.1 pe
ERR3287707 MDR-TB lineage4.3.4.1 pe
ERR3287367 MDR-TB lineage4.3.4.1 pe
ERR2184440 MDR-TB lineage4.3.4.1 pe
SRR7276714 Sensitive lineage4.3.4.1 None
ERR2184566 MDR-TB lineage4.3.4.1 pe
ERR2184442 MDR-TB lineage4.3.4.1 pe
SRR7276685 Sensitive lineage4.3.4.1 None
SRR7645802 Sensitive lineage4.3.4.1 None
ERR11067566 Sensitive lineage4.3.4.1 None
SRR7517786 MDR-TB lineage4.3.4.1 None
SRR7645905 Sensitive lineage4.3.4.1 None
SRR7645894 Sensitive lineage4.3.4.1;lineage4.1.2.1 None
SRR7645812 Sensitive lineage4.3.4.1 None
SRR7646021 Sensitive lineage4.3.4.1 None
SRR7645974 Other lineage4.3.4.1 None
SRR7645973 Other lineage4.3.4.1 None
SRR8866474 Other lineage4.3.4 None
SRR7755698 Sensitive lineage4.3.4.1 None
DRR130087 Pre-XDR-TB lineage4.3.4.1 None
DRR130088 Pre-XDR-TB lineage4.3.4.1 None
DRR130090 Pre-XDR-TB lineage4.3.4.1 None
DRR130089 Pre-XDR-TB lineage4.3.4.1 None
ERR12117898 MDR-TB lineage4.3.4.1 None
DRR130187 Pre-XDR-TB lineage4.3.4.1 None
DRR130188 Pre-XDR-TB lineage4.3.4.1 None
ERR10796558 Sensitive lineage4 None
ERR12117969 MDR-TB lineage4.3.4.1 None
ERR10465764 Sensitive lineage4.3.4.1 None
ERR10969108 Sensitive lineage4.3.4.1 None
ERR144612 RR-TB lineage4.8;lineage4.3.4.1;lineage4.1.2 None
ERR11043877 Sensitive lineage4.3.4.1 None
ERR11044185 HR-TB lineage4.3.4.1 None
ERR12117985 MDR-TB lineage4.3.4.1 None
ERR12117960 MDR-TB lineage4.3.4.1 None
ERR4821972 HR-TB lineage4.3.4.1 gb
ERR12118058 MDR-TB lineage4.3.4.1 None
ERR3287561 MDR-TB lineage4.3.4.1 None
ERR3287537 MDR-TB lineage4.3.4.1 None
ERR3287545 MDR-TB lineage4.3.4.1 None
ERR3287560 MDR-TB lineage4.3.4.1 None
ERR3287576 HR-TB lineage4.3.4.1 None