Rv2043c - c.375_389delCGATGAGGTCGATGT
Drug resistance types
0 Sensitive
2 RR-TB
2 HR-TB
49 MDR-TB
28 Pre-XDR-TB
8 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 46 |
| lineage1.2.2.2;lineage4.8.1 | 1 |
| lineage2.2.1 | 10 |
| lineage4.3.4.2 | 29 |
| lineage4.3.3;lineage4.3.4.2 | 2 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11466322 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11465987 | XDR-TB | lineage1.2.2.2;lineage4.8.1 | None | ERR552115 | MDR-TB | lineage1.2.2.2 | sz | SRR28888060 | Pre-XDR-TB | lineage2.2.1 | None | SRR28240078 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288770 | MDR-TB | lineage1.2.2.2 | None | ERR8975761 | MDR-TB | lineage1.2.2.2 | None | ERR12118000 | MDR-TB | lineage4.3.4.2 | None | ERR5866228 | MDR-TB | lineage2.2.1 | None | ERR7362015 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR12117994 | MDR-TB | lineage4.3.4.2 | None | ERR9992707 | XDR-TB | lineage1.2.2.2 | None | ERR10748271 | MDR-TB | lineage1.2.2.2 | None | SRR1019139 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR12420356 | MDR-TB | lineage2.2.1 | None | ERR2815356 | MDR-TB | lineage4.3.4.2 | None | SRR5153093 | MDR-TB | lineage2.2.1 | None | SRR6207291 | HR-TB | lineage1.2.2.2 | None | ERR551801 | MDR-TB | lineage1.2.2.2 | sz | SAMEA5569632 | MDR-TB | lineage4.3.4.2 | None | ERR751474 | MDR-TB | lineage4.3.4.2 | pe | ERR4812895 | MDR-TB | lineage4.3.4.2 | pe | ERR3287646 | MDR-TB | lineage4.3.4.2 | pe | ERR11465216 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR7737898 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR3287655 | MDR-TB | lineage4.3.4.2 | pe | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR553020 | MDR-TB | lineage1.2.2.2 | None | SRR1019149 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR6197039 | MDR-TB | lineage4.3.4.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR11466247 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR12118020 | MDR-TB | lineage4.3.4.2 | None | ERR2124100 | MDR-TB | lineage4.3.4.2 | None | SAMN02350482 | Pre-XDR-TB | lineage1.2.2.2 | za | SRR1144830 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9993094 | XDR-TB | lineage1.2.2.2 | None | ERR9029866 | MDR-TB | lineage4.3.4.2 | None | ERR12117952 | MDR-TB | lineage4.3.4.2 | None | ERR2861376 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | None | ERR5865495 | MDR-TB | lineage2.2.1 | None | ERR5865494 | MDR-TB | lineage2.2.1 | None | ERR6197692 | MDR-TB | lineage4.3.4.2 | None | SRR26936926 | MDR-TB | lineage2.2.1 | None | ERR13289002 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR12118054 | MDR-TB | lineage4.3.4.2 | None | SRR6256970 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993260 | XDR-TB | lineage1.2.2.2 | None | ERR11465448 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR553059 | MDR-TB | lineage1.2.2.2 | sz | ERR4813464 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pe | ERR7910983 | MDR-TB | lineage4.3.4.2 | pe | ERR553021 | MDR-TB | lineage1.2.2.2 | sz | SRR12882085 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1140943 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR3287439 | MDR-TB | lineage4.3.4.2 | None | SRR1140961 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1166874 | Pre-XDR-TB | lineage1.2.2.2 | None | SAMN02414931 | Pre-XDR-TB | lineage1.2.2.2 | se | ERR9992971 | XDR-TB | lineage1.2.2.2 | None | ERR775371 | MDR-TB | lineage4.3.4.2 | pe | ERR11465486 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR751394 | MDR-TB | lineage4.3.4.2 | pe | SRR29539746 | MDR-TB | lineage2.2.1 | None | ERR4813722 | MDR-TB | lineage4.3.4.2 | None | ERR552000 | MDR-TB | lineage1.2.2.2 | sz | ERR9030519 | MDR-TB | lineage1.1.2 | None | ERR9119958 | Pre-XDR-TB | lineage1.2.2.2 | None | SAMN02350478 | Pre-XDR-TB | lineage1.2.2.2 | za | ERR2815357 | MDR-TB | lineage4.3.4.2 | None | ERR551739 | MDR-TB | lineage1.2.2.2 | sz | ERR2861375 | MDR-TB | lineage4.3.4.2 | None | ERR4811768 | MDR-TB | lineage4.3.4.2 | pe | ERR13290490 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR13290492 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1146373 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11465719 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR8975017 | XDR-TB | lineage1.2.2.2 | None | ERR3287668 | MDR-TB | lineage4.3.4.2 | pe | ERR3287442 | MDR-TB | lineage4.3.4.2 | pe | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | ERR9992611 | XDR-TB | lineage1.2.2.2 | None | ERR11466298 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR2199793 | RR-TB | lineage1.2.2.2 | None | ERR553060 | RR-TB | lineage1.2.2.2 | None | ERR6197037 | MDR-TB | lineage4.3.4.2 | None | ERR11465869 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4812178 | MDR-TB | lineage4.3.4.2 | pe | ERR9992644 | XDR-TB | lineage1.2.2.2 | None |
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