Rv2043c - p.Ala134Val
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
7 HR-TB
83 MDR-TB
50 Pre-XDR-TB
1 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 87 |
| lineage3 | 8 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1 | 5 |
| lineage1.1.2 | 1 |
| lineage4 | 3 |
| lineage4.3.3 | 6 |
| lineage1.2.2.2 | 5 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage4.4.2 | 2 |
| lineage4.3.4.2 | 3 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.8 | 2 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.2.1 | 4 |
| lineage4.7 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1;lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 142 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14781955 | Pre-XDR-TB | lineage2.2.1 | None | SRR25395614 | MDR-TB | lineage2.2.1 | None | SRR25827512 | MDR-TB | lineage3 | None | SRR5073810 | MDR-TB | lineage2.2.1 | vn | SRR5073654 | MDR-TB | lineage2.2.1 | vn | SRR6831803 | MDR-TB | lineage2.2.1 | None | SRR6832521 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774428 | MDR-TB | lineage4.3.2.1 | None | SRR21798488 | HR-TB | lineage4.1.2.1 | None | ERR4827763 | MDR-TB | lineage2.2.1 | None | ERR10610287 | MDR-TB | lineage2.2.1 | None | SRR10040242 | MDR-TB | lineage2.2.1 | None | ERR4800661 | MDR-TB | lineage1.1.2 | None | ERR5865931 | MDR-TB | lineage2.2.1 | None | ERR2516220 | MDR-TB | lineage4 | be | SRR6831929 | MDR-TB | lineage4.3.3 | None | ERR4831772 | MDR-TB | lineage2.2.1 | vn | ERR2600547 | MDR-TB | lineage2.2.1 | None | SRR1062821 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017677 | MDR-TB | lineage1.2.2.2 | None | SRR6930925 | MDR-TB | lineage1.2.1.2.1 | None | ERR7737633 | MDR-TB | lineage1.1.1.1 | None | ERR4553550 | HR-TB | lineage1.2.2.2 | None | ERR7162974 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539071 | MDR-TB | lineage2.2.1 | None | ERR10762312 | MDR-TB | lineage4.3.3 | None | SRR29539767 | MDR-TB | lineage2.2.1 | None | SRR10513832 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832474 | MDR-TB | lineage2.2.1 | None | SRR7755704 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR13232563 | MDR-TB | lineage2.2.1 | None | SRR1174282 | MDR-TB | lineage3 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081913 | MDR-TB | lineage4.3.3 | None | SRR29539265 | MDR-TB | lineage2.2.1 | None | SRR24255880 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040320 | MDR-TB | lineage2.2.1 | None | SRR10040404 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285764 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285853 | MDR-TB | lineage4.3.3 | None | SRR29539333 | MDR-TB | lineage2.2.1 | None | SRR24255948 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316108 | MDR-TB | lineage4.4.2 | None | ERR4832044 | MDR-TB | lineage2.2.1 | None | SRR12142375 | MDR-TB | lineage2.2.1 | None | ERR4827995 | MDR-TB | lineage2.2.1 | None | ERR8773506 | MDR-TB | lineage2.2.1 | None | ERR4828015 | MDR-TB | lineage2.2.1 | None | SRR9224984 | MDR-TB | lineage4.3.4.2 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR16088069 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR29289191 | Pre-XDR-TB | lineage3 | None | SRR6832852 | HR-TB | lineage2.2.1 | None | ERR4797786 | MDR-TB | lineage4.8 | in | SRR21798473 | HR-TB | lineage4.1.2.1 | None | SRR14802196 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02350410 | Pre-XDR-TB | lineage2.2.1 | za | SRR6832385 | MDR-TB | lineage2.2.1 | None | ERR4830018 | Pre-XDR-TB | lineage2.2.1 | None | ERR13195555 | MDR-TB | lineage2.2.2 | None | ERR13243543 | MDR-TB | lineage2.2.2 | None | ERR6358940 | MDR-TB | lineage4.3.4.2.1 | None | SRR21277238 | MDR-TB | lineage2.2.1 | None | ERR5897101 | Pre-XDR-TB | lineage3 | None | SRR20970004 | MDR-TB | lineage2.2.1 | None | SRR28498698 | Pre-XDR-TB | lineage4.2.1 | None | ERR10762464 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393349 | MDR-TB | lineage4 | None | ERR4831801 | MDR-TB | lineage2.2.1 | vn | ERR4831782 | MDR-TB | lineage2.2.1 | vn | SRR2024966 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510716 | MDR-TB | lineage2.2.1 | it | SRR6831739 | MDR-TB | lineage2.2.1 | None | SRR7755738 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR5153603 | MDR-TB | lineage2.2.1 | None | ERR11466511 | MDR-TB | lineage4.3.2.1 | None | SRR28393316 | MDR-TB | lineage4 | None | SRR6832185 | MDR-TB | lineage2.2.1 | None | SRR29539771 | MDR-TB | lineage2.2.1 | None | SRR24255935 | MDR-TB | lineage2.2.1 | None | SRR16088313 | MDR-TB | lineage2.2.1 | None | SRR24256008 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040450 | MDR-TB | lineage2.2.1 | None | SRR21798474 | HR-TB | lineage4.1.2.1 | None | ERR9027238 | MDR-TB | lineage4.7 | None | SRR18714922 | Pre-XDR-TB | lineage2.2.1 | None | SRR1011451 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430363 | MDR-TB | lineage2.2.1 | None | SRR29539663 | MDR-TB | lineage2.2.1 | None | SRR10380060 | Pre-XDR-TB | lineage4.2.1 | None | ERR13290912 | MDR-TB | lineage2.1 | None | SRR3105799 | Pre-XDR-TB | lineage3 | None | SRR24256158 | MDR-TB | lineage4.2.1 | None | SRR21277839 | MDR-TB | lineage4.4.2 | None | SRR24256332 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827631 | MDR-TB | lineage4.2.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798610 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539426 | Pre-XDR-TB | lineage4.3.3 | None | SRR29538965 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831837 | MDR-TB | lineage2.2.1 | None | SRR6831846 | MDR-TB | lineage2.2.1 | None | SRR1173334 | MDR-TB | lineage3 | None | SRR29539578 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR30182617 | MDR-TB | lineage1.2.2.2 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303286 | MDR-TB | lineage2.2.1 | None | ERR6359042 | MDR-TB | lineage4.3.4.2.1 | None | SRR23311077 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050747 | MDR-TB | lineage4.3.4.2 | None | ERR11798611 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714903 | HR-TB | lineage2.2.1 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | SRR12420536 | MDR-TB | lineage2.2.1 | None | ERR4797621 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797192 | Pre-XDR-TB | lineage2.2.1;lineage4.3.4.2 | in | ERR4800279 | MDR-TB | lineage1.2.2.2 | in | SRR8369847 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539755 | XDR-TB | lineage2.2.1 | None | ERR11067750 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610286 | MDR-TB | lineage2.2.1 | None | SRR21798507 | HR-TB | lineage4.1.2.1 | None | ERR4423732 | MDR-TB | lineage4.3.2.1 | None | SRR28351544 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4831908 | MDR-TB | lineage2.2.1 | vn | ERR8665576 | Pre-XDR-TB | lineage2.2.1 | None | SRR29538935 | MDR-TB | lineage2.2.1 | None | SRR23861717 | MDR-TB | lineage2.2.1 | None | ERR4831873 | MDR-TB | lineage2.2.1 | vn | ERR2600564 | Pre-XDR-TB | lineage2.2.1 | None | ERR7162973 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861833 | MDR-TB | lineage2.2.1 | None | SRR14782475 | Pre-XDR-TB | lineage2.2.1 | None | ERR137275 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2513980 | Other | lineage4.8 | gb | ERR2041750 | MDR-TB | lineage4.1.2.1 | rs | SRR5341305 | Pre-XDR-TB | lineage3 | in | SRR6831854 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969665 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR9806702 | MDR-TB | lineage2.2.1 | None | ERR13284802 | MDR-TB | lineage4.3.3 | None | SRR24256315 | Pre-XDR-TB | lineage2.2.1 | None |
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