lineage | Count |
---|---|
lineage4.8 | 5 |
lineage4.2 | 1 |
lineage4.3.4.2 | 4 |
lineage4.2.1 | 4 |
lineage4.3.3 | 4 |
lineage3 | 4 |
lineage2.2.1 | 16 |
lineage1.2.2.2 | 1 |
lineage4.1.2.1 | 6 |
lineage4.2.2.2 | 2 |
lineage1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.4.1 | 2 |
lineage4.6.2.2 | 2 |
lineage1.1.2 | 1 |
lineage4.3.2.1 | 2 |
lineage4.4.1.1;lineage4.3.2.1 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 59 |
ID | Drug resistance | Lineage | Country iso2 | SRR1173580 | Pre-XDR-TB | lineage4.8 | None | SRR13423567 | Pre-XDR-TB | lineage4.2 | None | SRR1173859 | Pre-XDR-TB | lineage4.8 | None | SRR13583366 | MDR-TB | lineage4.3.4.2 | None | SRR14782140 | MDR-TB | lineage4.2.1 | None | SRR16089550 | HR-TB | lineage4.3.3 | None | SRR22424850 | Pre-XDR-TB | lineage3 | None | SRR21708925 | HR-TB | lineage4.3.3 | None | SRR18715262 | MDR-TB | lineage2.2.1 | None | SRR22424887 | MDR-TB | lineage1.2.2.2 | None | SRR1723738 | MDR-TB | lineage2.2.1 | None | ERR11083085 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813794 | MDR-TB | lineage4.1.2.1 | br | ERR11081050 | MDR-TB | lineage4.2.2.2 | None | SRR21887695 | Pre-XDR-TB | lineage2.2.1 | None | SRR6797833 | MDR-TB | lineage1 | None | ERR4813841 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR3105770 | XDR-TB | lineage3 | None | ERR2041732 | MDR-TB | lineage4.8 | rs | SRR3105793 | Pre-XDR-TB | lineage4.1.2 | None | SRR1723570 | Pre-XDR-TB | lineage2.2.1 | cn | SRR3743480 | Pre-XDR-TB | lineage4.2.1 | None | SAMEA2534314 | Pre-XDR-TB | lineage2.2.1 | ru | SRR2024918 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510351 | Pre-XDR-TB | lineage3 | pk | SAMN02628503 | Pre-XDR-TB | lineage4.8 | ir | ERR3148200 | MDR-TB | lineage4.3.4.2 | mx | ERR2652995 | MDR-TB | lineage4.1.2.1 | None | ERR3077997 | MDR-TB | lineage4.3.4.2.1 | None | ERR2653142 | MDR-TB | lineage4.3.4.2 | None | ERR2653161 | MDR-TB | lineage4.3.4.1 | None | ERR2653196 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR6046888 | MDR-TB | lineage3 | gb | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR2653209 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR671724 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4872133 | MDR-TB | lineage4.6.2.2 | None | SRR6832256 | Pre-XDR-TB | lineage2.2.1 | None | SRR671799 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8380928 | MDR-TB | lineage1.1.2 | in | SRR6824341 | MDR-TB | lineage2.2.1 | cn | SRR6824532 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6832362 | MDR-TB | lineage2.2.1 | None | ERR4011927 | MDR-TB | lineage4.3.2.1 | None | ERR1035070 | Pre-XDR-TB | lineage4.4.1.1;lineage4.3.2.1 | za | ERR10680086 | RR-TB | lineage4.8 | None | ERR108482 | MDR-TB | lineage4.1.2.1 | ru | SRR8327860 | MDR-TB | lineage2.2.1 | None | ERR11043608 | MDR-TB | lineage4.3.3 | None | ERR5917718 | Pre-XDR-TB | lineage2.2.1 | by | ERR4799543 | Pre-XDR-TB | lineage4.3 | None | ERR5917702 | MDR-TB | lineage4.2.1 | by | ERR751589 | MDR-TB | lineage4.3.3 | pe | ERR7737776 | MDR-TB | lineage4.2.2.2 | None | ERR9119539 | MDR-TB | lineage4.6.2.2 | None | ERR9907795 | MDR-TB | lineage4.3.4.1 | None | SRR10380040 | Pre-XDR-TB | lineage4.2.1 | None | SRR10306027 | Pre-XDR-TB | lineage2.2.1 | None | SRR10868973 | MDR-TB | lineage4.3.2.1 | None |
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