Rv2043c - p.Leu85Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
6 HR-TB
49 MDR-TB
44 Pre-XDR-TB
2 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1.1 | 1 |
| lineage4.3.4.2 | 7 |
| lineage3 | 8 |
| lineage2.2.1 | 40 |
| lineage4.1.2.1 | 7 |
| lineage4.3.3 | 13 |
| lineage4.8 | 5 |
| lineage4.3.2.1 | 3 |
| lineage4.2.1 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1;lineage4.4.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 103 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR24255963 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR2653196 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR13289721 | MDR-TB | lineage3 | None | SRR29050745 | MDR-TB | lineage4.3.4.2 | None | SRR6832256 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539365 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813841 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28859965 | HR-TB | lineage4.3.3 | None | ERR551955 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260009 | Pre-XDR-TB | lineage3 | None | SRR8327860 | MDR-TB | lineage2.2.1 | None | SRR29385434 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307502 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02628503 | Pre-XDR-TB | lineage4.8 | ir | ERR4011927 | MDR-TB | lineage4.3.2.1 | None | SRR28351306 | MDR-TB | lineage4.2.1 | None | ERR4813794 | MDR-TB | lineage4.1.2.1 | br | SRR2024918 | Pre-XDR-TB | lineage2.2.1 | cn | SAMEA2534314 | Pre-XDR-TB | lineage2.2.1 | ru | ERR108482 | MDR-TB | lineage4.1.2.1 | ru | SRR6824341 | MDR-TB | lineage2.2.1 | cn | SRR10868973 | MDR-TB | lineage4.3.2.1 | None | SRR29539066 | MDR-TB | lineage2.2.1 | None | ERR3077997 | MDR-TB | lineage4.3.4.2.1 | None | SRR22461585 | MDR-TB | lineage4.3.3 | None | ERR1035070 | Pre-XDR-TB | lineage4.3.2.1;lineage4.4.1.1 | za | SRR29539687 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539644 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583366 | MDR-TB | lineage4.3.4.2 | None | ERR13284705 | MDR-TB | lineage4.3.3 | None | SRR13423567 | Pre-XDR-TB | lineage4.2.2 | None | SRR21708925 | HR-TB | lineage4.3.3 | None | SRR1723738 | MDR-TB | lineage2.2.1 | None | SRR3105770 | XDR-TB | lineage3 | None | ERR2652995 | MDR-TB | lineage4.1.2.1 | None | ERR551957 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291705 | HR-TB | lineage4.3.3 | None | ERR5917702 | MDR-TB | lineage4.2.1 | by | SRR8758889 | MDR-TB | lineage4.3.3 | None | SRR16088567 | MDR-TB | lineage2.2.1 | None | SRR25515775 | Pre-XDR-TB | lineage2.2.1 | None | SRR6797833 | Other | lineage1.2.2.2 | None | SRR671724 | Pre-XDR-TB | lineage2.2.1 | cn | SRR18715262 | MDR-TB | lineage2.2.1 | None | ERR11043608 | MDR-TB | lineage4.3.3 | None | SRR10306027 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424887 | MDR-TB | lineage1.2.2.2 | None | ERR4799543 | Pre-XDR-TB | lineage4.3 | None | SRR29539237 | Pre-XDR-TB | lineage2.2.1 | None | SRR8380928 | MDR-TB | lineage1.1.2 | in | SRR29539116 | MDR-TB | lineage2.2.1 | None | ERR2041732 | MDR-TB | lineage4.8 | rs | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR11083085 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887695 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872133 | MDR-TB | lineage4.6.2.2 | None | ERR13291245 | HR-TB | lineage4.3.3 | None | SRR1173580 | Pre-XDR-TB | lineage4.8 | None | SRR29772595 | MDR-TB | lineage2.2.1 | None | SRR29053211 | HR-TB | lineage4.3.3 | None | ERR13276281 | MDR-TB | lineage4.2.2.2 | None | SRR16089550 | HR-TB | lineage4.3.3 | None | ERR13284471 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510351 | Pre-XDR-TB | lineage3 | pk | SRR28706678 | MDR-TB | lineage2.2.1 | None | SRR29289223 | XDR-TB | lineage3 | None | SRR29539363 | Pre-XDR-TB | lineage2.2.1 | None | ERR3148200 | MDR-TB | lineage4.3.4.2 | mx | ERR13284610 | Pre-XDR-TB | lineage2.2.1 | None | ERR9907795 | MDR-TB | lineage4.3.4.1 | None | SRR14782140 | MDR-TB | lineage4.2.1 | None | SRR28393917 | MDR-TB | lineage4.3.3 | None | SRR28706665 | MDR-TB | lineage2.2.1 | None | SRR24710101 | MDR-TB | lineage2.2.1 | None | SRR671799 | Pre-XDR-TB | lineage2.2.1 | cn | SRR27069394 | Pre-XDR-TB | lineage4.4.2 | None | SRR28351581 | Pre-XDR-TB | lineage3 | None | SRR28393943 | MDR-TB | lineage4.3.3 | None | ERR751589 | MDR-TB | lineage4.3.3 | pe | SRR6046888 | MDR-TB | lineage3 | gb | SRR6824532 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2653209 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29273722 | MDR-TB | lineage4.1.2.1 | None | ERR2307681 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307733 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710171 | MDR-TB | lineage2.2.1 | None | SRR3743480 | Pre-XDR-TB | lineage4.2.1 | None | ERR13288748 | MDR-TB | lineage4.3.2.1 | None | ERR11081050 | MDR-TB | lineage4.2.2.2 | None | ERR551956 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424850 | Pre-XDR-TB | lineage3 | None | ERR5917718 | Pre-XDR-TB | lineage2.2.1 | by | ERR10680086 | RR-TB | lineage4.8 | None | ERR9119539 | MDR-TB | lineage4.6.2.2 | None | SRR6832362 | MDR-TB | lineage2.2.1 | None | SRR29539515 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723570 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29016987 | MDR-TB | lineage4.3.4.2 | None | ERR13260477 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR2653161 | MDR-TB | lineage4.3.4.1 | None | SRR1173859 | Pre-XDR-TB | lineage4.8 | None | SRR29017567 | MDR-TB | lineage4.3.4.2 | None | ERR2653142 | MDR-TB | lineage4.3.4.2 | None |
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