Rv2043c - p.Lys96Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
49 MDR-TB
29 Pre-XDR-TB
9 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 40 |
| lineage2.2.2 | 9 |
| lineage3 | 9 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2.1 | 13 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage2.2.2;lineage4.4.2 | 1 |
| lineage4.3.3 | 4 |
| lineage3.1.2 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.9 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.5 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28351511 | Pre-XDR-TB | lineage2.2.1 | None | SRR8352463 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887737 | MDR-TB | lineage2.2.2 | None | SRR28351276 | Pre-XDR-TB | lineage3 | None | SRR29093916 | XDR-TB | lineage2.2.2 | None | SRR3105758 | MDR-TB | lineage3 | None | ERR2510502 | MDR-TB | lineage3 | pk | ERR3273211 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR21887657 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975358 | HR-TB | lineage4.3.2.1 | None | SRR2101743 | HR-TB | lineage4.3.2.1 | None | ERR2433003 | MDR-TB | lineage4.3.4.2.1 | br | ERR133951 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2516844 | MDR-TB | lineage2.2.1 | gb | ERR2516968 | MDR-TB | lineage2.2.1 | gb | ERR2516982 | MDR-TB | lineage2.2.1 | gb | ERR2517089 | MDR-TB | lineage2.2.1 | gb | ERR2516805 | MDR-TB | lineage2.2.1 | gb | SRR5709758 | Pre-XDR-TB | lineage1.1.1 | th | SRR12420400 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093366 | XDR-TB | lineage2.2.2;lineage4.4.2 | None | ERR13266435 | MDR-TB | lineage4.3.3 | None | SRR833120 | MDR-TB | lineage4.3.2.1 | None | SRR3743487 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799815 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799587 | XDR-TB | lineage3.1.2 | in | ERR13289302 | MDR-TB | lineage4.3.2.1 | None | SRR6485100 | MDR-TB | lineage2.2.1 | None | SRR25827858 | MDR-TB | lineage4.3.3 | None | SRR12142409 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772561 | Pre-XDR-TB | lineage2.2.1 | None | SRR23691409 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290018 | Other | lineage4.1.1.3 | None | ERR13289780 | Other | lineage4.1.1.3 | None | SRR29289118 | MDR-TB | lineage3 | None | ERR11488591 | MDR-TB | lineage2.2.1 | None | SRR8791307 | Other | lineage4.9 | None | SRR29093128 | XDR-TB | lineage2.2.2 | None | ERR13261235 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR9907701 | MDR-TB | lineage4.9 | None | SRR8651602 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671751 | Pre-XDR-TB | lineage4.5 | cn | ERR11773817 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351482 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4831274 | MDR-TB | lineage3 | de | ERR1193888 | MDR-TB | lineage4.3.2.1 | sz | ERR067627 | MDR-TB | lineage2.2.1 | ru | ERR552789 | MDR-TB | lineage4.3.2.1 | sz | SRR10828625 | MDR-TB | lineage4.3.3 | None | SAMN02053757 | MDR-TB | lineage4.3.2.1 | za | DRR184885 | MDR-TB | lineage1.1.1.1 | vn | SRR24256347 | MDR-TB | lineage2.2.1 | None | SRR9971234 | MDR-TB | lineage4.3.2.1 | None | SRR29093123 | XDR-TB | lineage2.2.2 | None | ERR11049782 | MDR-TB | lineage2.2.1 | None | SRR29093955 | XDR-TB | lineage2.2.2 | None | SRR6484887 | MDR-TB | lineage2.2.1 | None | ERR13292581 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662409 | MDR-TB | lineage2.2.1 | None | ERR5865978 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802035 | MDR-TB | lineage2.2.1 | None | SRR833000 | MDR-TB | lineage4.3.2.1 | None | SRR29385451 | MDR-TB | lineage2.2.1 | None | ERR11798575 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662374 | MDR-TB | lineage4.3.3 | None | SRR12420635 | MDR-TB | lineage2.2.1 | None | SRR29093122 | XDR-TB | lineage2.2.2 | None | SRR24709912 | MDR-TB | lineage2.2.1 | None | SRR25206979 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6981989 | HR-TB | lineage4.3.2.1 | None | SRR832978 | MDR-TB | lineage4.3.2.1 | None | SRR15316322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964547 | MDR-TB | lineage3 | None | ERR2510433 | MDR-TB | lineage3 | pk | ERR234629 | MDR-TB | lineage2.2.1 | ru | ERR2433007 | MDR-TB | lineage4.3.4.2.1 | None | SRR833081 | MDR-TB | lineage4.3.2.1 | None | ERR779918 | MDR-TB | lineage4 | pe | SRR10397134 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516593 | MDR-TB | lineage4.1.2.1 | nl | SRR6046374 | Other | lineage4.1.1.3 | gb | SRR6824356 | Pre-XDR-TB | lineage2.2.1 | cn | SRR26936955 | MDR-TB | lineage2.2.1 | None | SAMN02053777 | MDR-TB | lineage4.3.2.1 | za | ERR4276889 | MDR-TB | lineage3 | None | SRR833101 | Other | lineage4.3.2.1;lineage4.9 | None | SRR15014787 | MDR-TB | lineage1.1.2 | None | ERR987747 | MDR-TB | lineage3 | None | SRR1723454 | Pre-XDR-TB | lineage2.2.1 | cn | ERR234605 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR29093120 | XDR-TB | lineage2.2.2 | None | ERR10762373 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142448 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093947 | XDR-TB | lineage2.2.2 | None | SRR12420287 | Pre-XDR-TB | lineage2.2.1 | None |
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