lineage | Count |
---|---|
lineage2.2.1 | 19 |
lineage5.2 | 2 |
lineage1.1.3 | 4 |
lineage2.2.1.1 | 1 |
lineage1.1.2 | 2 |
lineage4.2.1 | 10 |
lineage4.2.2.2 | 5 |
lineage4.7 | 12 |
lineage4.9 | 3 |
lineage3 | 4 |
lineage4.3 | 1 |
lineage4.1.2.1;lineage4.2.1 | 1 |
lineage4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 65 |
ID | Drug resistance | Lineage | Country iso2 | ERR5864922 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082280 | MDR-TB | lineage2.2.1 | None | SRR24709987 | MDR-TB | lineage2.2.1 | None | ERR2707138 | MDR-TB | lineage5.2 | cd | ERR4553628 | RR-TB | lineage1.1.3 | None | SRR5073601 | HR-TB | lineage2.2.1.1 | vn | ERR4800474 | Pre-XDR-TB | lineage1.1.2 | in | SRR23340007 | MDR-TB | lineage4.2.1 | None | ERR11081392 | MDR-TB | lineage4.2.2.2 | None | SRR23339985 | MDR-TB | lineage4.2.1 | None | ERR2653102 | Pre-XDR-TB | lineage4.7 | None | ERR4553985 | MDR-TB | lineage4.9 | None | ERR2652993 | MDR-TB | lineage4.7 | None | SRR29016828 | MDR-TB | lineage2.2.1 | None | SRR23340139 | MDR-TB | lineage4.2.1 | None | SRR21690288 | Sensitive | lineage2.2.1 | None | ERR5864924 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964560 | Pre-XDR-TB | lineage3 | None | ERR11775995 | MDR-TB | lineage4.7 | None | ERR4822384 | MDR-TB | lineage2.2.1 | kg | ERR13284299 | MDR-TB | lineage4.2.2.2 | None | SRR29017686 | MDR-TB | lineage1.1.3 | None | SRR28044478 | Pre-XDR-TB | lineage3 | None | SRR6257085 | MDR-TB | lineage2.2.1 | ru | ERR2653121 | MDR-TB | lineage4.7 | None | ERR4830760 | MDR-TB | lineage3 | ir | ERR2653147 | MDR-TB | lineage4.7 | None | ERR2653098 | Pre-XDR-TB | lineage4.7 | None | ERR2652992 | MDR-TB | lineage4.7 | None | ERR2653101 | MDR-TB | lineage4.7 | None | ERR2652998 | Pre-XDR-TB | lineage4.7 | None | ERR11776041 | MDR-TB | lineage4.7 | None | ERR11069058 | MDR-TB | lineage4.2.2.2 | None | ERR4829832 | Pre-XDR-TB | lineage4.3 | None | ERR11488813 | Pre-XDR-TB | lineage2.2.1 | None | SRR8791298 | Other | lineage4.9 | None | SRR13232482 | MDR-TB | lineage2.2.1 | None | SRR28498467 | MDR-TB | lineage4.1.2.1;lineage4.2.1 | None | ERR5865636 | MDR-TB | lineage2.2.1 | None | SRR23310925 | MDR-TB | lineage4.2.1 | None | SRR28858524 | MDR-TB | lineage4.1.1 | None | ERR2653153 | MDR-TB | lineage4.7 | None | SRR23340019 | MDR-TB | lineage4.2.1 | None | SRR23340165 | MDR-TB | lineage4.2.1 | None | SRR23340141 | MDR-TB | lineage4.2.1 | None | SRR10147705 | MDR-TB | lineage3 | None | SRR23340058 | MDR-TB | lineage4.2.1 | None | ERR11488606 | MDR-TB | lineage2.2.1 | None | ERR11081140 | MDR-TB | lineage4.2.2.2 | None | SRR23340157 | MDR-TB | lineage4.2.1 | None | ERR5865637 | MDR-TB | lineage2.2.1 | None | ERR5864923 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488979 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827398 | MDR-TB | lineage1.1.2 | None | ERR4553794 | MDR-TB | lineage2.2.1 | None | ERR11776022 | MDR-TB | lineage4.7 | None | ERR13276344 | MDR-TB | lineage2.2.1 | None | SRR12142407 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553622 | RR-TB | lineage1.1.3 | None | SRR29231682 | MDR-TB | lineage5.2 | None | SRR10379963 | MDR-TB | lineage4.2.1 | None | ERR5864926 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017409 | MDR-TB | lineage1.1.3 | None | ERR11081285 | MDR-TB | lineage4.2.2.2 | None | SRR29016824 | MDR-TB | lineage4.9 | None |
---|