Rv2043c - p.Thr177Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
32 MDR-TB
102 Pre-XDR-TB
18 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 125 |
| lineage4.1 | 1 |
| lineage4.8 | 4 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1.1;lineage4 | 1 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage2.2.1;lineage3 | 4 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage3 | 3 |
| lineage2.2.1.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.2 | 1 |
| lineage1.1.3.3;lineage2.2.1;lineage3 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1;lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 153 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13261467 | XDR-TB | lineage2.2.1 | None | SRR6832544 | MDR-TB | lineage4.1 | None | SRR29538981 | XDR-TB | lineage2.2.1 | None | ERR13260028 | MDR-TB | lineage2.2.1 | None | SRR29539223 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261093 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393824 | MDR-TB | lineage4.8 | None | SRR22175182 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827532 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255992 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797218 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797439 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797453 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797717 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796781 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796757 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798136 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799244 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797405 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799655 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799997 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800195 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800363 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800411 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799062 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827366 | XDR-TB | lineage2.2.1 | None | ERR4799924 | Pre-XDR-TB | lineage2.2.1 | in | SRR18715029 | MDR-TB | lineage2.2.1 | None | ERR13261119 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255911 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800591 | Pre-XDR-TB | lineage2.2.1 | in | SRR29539594 | XDR-TB | lineage2.2.1 | None | ERR12790843 | MDR-TB | lineage2.2.1 | None | ERR4797885 | XDR-TB | lineage2.2.1 | None | SRR28045507 | XDR-TB | lineage2.2.1 | None | SRR16087879 | MDR-TB | lineage2.2.1 | None | SRR5341210 | Pre-XDR-TB | lineage2.2.1 | in | SRR7829592 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539600 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827785 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351172 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798500 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797521 | XDR-TB | lineage2.2.1 | in | SRR6832280 | MDR-TB | lineage2.2.1 | None | SRR6832692 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827540 | XDR-TB | lineage2.2.1 | None | SRR27450505 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796274 | Pre-XDR-TB | lineage2.2.1 | None | SRR7795462 | MDR-TB | lineage4.1.2.1 | None | SRR18715106 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256264 | MDR-TB | lineage2.2.1 | None | ERR4797742 | Pre-XDR-TB | lineage2.2.1 | in | SRR29231196 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261482 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827524 | Pre-XDR-TB | lineage2.2.1.1;lineage4 | None | ERR13260977 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827304 | XDR-TB | lineage2.2.1;lineage3.1.2 | None | SRR18715334 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827543 | XDR-TB | lineage2.2.1;lineage3 | None | SRR29274276 | Pre-XDR-TB | lineage4.8 | None | ERR13261092 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175202 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681425 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539574 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175219 | XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | ERR13267091 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539196 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539785 | XDR-TB | lineage2.2.1 | None | ERR13290862 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827408 | Pre-XDR-TB | lineage2.2.1 | None | ERR16022333 | Pre-XDR-TB | lineage3 | None | ERR2510450 | MDR-TB | lineage3 | pk | ERR13266619 | MDR-TB | lineage2.2.1 | None | ERR4798789 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799388 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799734 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266855 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797693 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797917 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800403 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799272 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798248 | MDR-TB | lineage2.2.1.1 | in | ERR4799980 | XDR-TB | lineage2.2.1 | None | ERR4830630 | MDR-TB | lineage2.2.1 | tm | ERR4829141 | MDR-TB | lineage4.6.2.2 | ng | ERR2510713 | Pre-XDR-TB | lineage2.2.1 | it | SRR22175245 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044032 | Pre-XDR-TB | lineage4.8 | None | SRR28393330 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2516423 | MDR-TB | lineage2.2.1 | nl | ERR13267081 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539452 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827382 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600450 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175220 | XDR-TB | lineage2.2.1 | None | ERR4800398 | Pre-XDR-TB | lineage2.2.1 | None | SRR27450341 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827629 | Pre-XDR-TB | lineage1.1.3.3;lineage2.2.1;lineage3 | None | SRR24256228 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266944 | Pre-XDR-TB | lineage2.2.1 | None | SRR8651647 | MDR-TB | lineage2.2.2 | cn | SRR29681219 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583489 | MDR-TB | lineage4.1.2.1 | None | SRR29772720 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539397 | MDR-TB | lineage2.2.1 | None | ERR13290874 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827572 | Pre-XDR-TB | lineage2.2.1;lineage4.1.1.3 | None | ERR16022319 | Pre-XDR-TB | lineage3 | None | ERR13267118 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261201 | MDR-TB | lineage2.2.1 | None | ERR4797884 | XDR-TB | lineage2.2.1;lineage3.1.2.1 | in | ERR4798033 | MDR-TB | lineage2.2.1 | in | ERR4796341 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798055 | MDR-TB | lineage4.3 | in | ERR4796562 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266737 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796559 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798297 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798249 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798361 | MDR-TB | lineage2.2.1 | in | ERR4799726 | Pre-XDR-TB | lineage2.2.1 | in | SRR25207118 | MDR-TB | lineage2.2.1 | None | ERR4799011 | MDR-TB | lineage2.2.1 | in | ERR4800086 | Pre-XDR-TB | lineage2.2.1 | in | ERR13262114 | MDR-TB | lineage2.2.1 | None | ERR4799167 | MDR-TB | lineage2.2.1 | in | ERR4798207 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799299 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796435 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796727 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798697 | Pre-XDR-TB | lineage2.2.1 | in | ERR4829176 | MDR-TB | lineage4.6.2.2 | ng | SRR29539101 | MDR-TB | lineage2.2.1 | None | SRR24255952 | MDR-TB | lineage2.2.1 | None | ERR4276869 | Pre-XDR-TB | lineage4.8 | None | SRR25827885 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR4800638 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796853 | Pre-XDR-TB | lineage2.2.1 | in | SRR22175251 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255891 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832086 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827306 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR29051288 | MDR-TB | lineage4.1.2.1 | None | SRR22175172 | XDR-TB | lineage2.2.1 | None | SRR22424823 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801448 | MDR-TB | lineage2.2.1 | None | SRR25827482 | XDR-TB | lineage2.2.1 | None | ERR13267119 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR24255994 | MDR-TB | lineage2.2.1 | None | ERR13261079 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827377 | Pre-XDR-TB | lineage2.2.1 | None |
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