SRR25827524
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage4
|
None
|
ERR4796559
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799924
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796853
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR24255994
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797742
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25827377
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13290874
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798248
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799997
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797405
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13261079
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24255992
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798789
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799272
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25207118
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798361
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR25827366
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4798297
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13261482
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29538981
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR13290862
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28045507
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR29539223
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2510450
|
MDR-TB
|
lineage3
|
pk
|
SRR29539397
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798033
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR29681425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175245
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796757
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799167
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR13267081
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29539452
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7829592
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4276869
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR25827785
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28351172
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797453
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799299
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR2510713
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
SRR25827572
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.1.3
|
None
|
SRR6832280
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832692
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827629
|
Pre-XDR-TB
|
lineage1.1.3.3;lineage2.2.1;lineage3
|
None
|
SRR7795462
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR24255891
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715106
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4799655
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13266619
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24256264
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR14801448
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827482
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4800363
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR13583489
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4797521
|
XDR-TB
|
lineage2.2.1
|
in
|
SRR25827408
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175182
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827532
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715029
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24255911
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4799980
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4829141
|
MDR-TB
|
lineage4.6.2.2
|
ng
|
ERR4829176
|
MDR-TB
|
lineage4.6.2.2
|
ng
|
ERR12790843
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13266855
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR8651647
|
MDR-TB
|
lineage2.2.2
|
cn
|
SRR29772720
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796435
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13267118
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796562
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798055
|
MDR-TB
|
lineage4.3
|
in
|
ERR11044032
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR28393330
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR25827382
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29539101
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796341
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800638
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4799388
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796781
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25827540
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4797917
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13261119
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797693
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR22175251
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24256228
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796274
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27450341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800086
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR22424823
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798500
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796727
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798697
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25827304
|
XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
SRR25827543
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
ERR13267119
|
HR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
ERR4830630
|
MDR-TB
|
lineage2.2.1
|
tm
|
SRR22175202
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175219
|
XDR-TB
|
lineage2.2.1;lineage4.2.2.2
|
None
|
ERR4797884
|
XDR-TB
|
lineage2.2.1;lineage3.1.2.1
|
in
|
ERR4800591
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR13261467
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR29539196
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798136
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR6832544
|
MDR-TB
|
lineage4.1
|
None
|
ERR4800411
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799726
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR28393824
|
MDR-TB
|
lineage4.8
|
None
|
ERR4800403
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR29231196
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516423
|
MDR-TB
|
lineage2.2.1
|
nl
|
SRR29539785
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR29539574
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29539594
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR16087879
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799011
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR29681219
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24255952
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2600450
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29539600
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175220
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4799244
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798249
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR25827885
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
ERR4797218
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797717
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798207
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800398
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797885
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR5341210
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR27450505
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6832086
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827306
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR22175172
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4797439
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799062
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|