Rv2428 - c.-57C>T
Drug resistance types
0 Sensitive
0 RR-TB
37 HR-TB
197 MDR-TB
56 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 2 |
| lineage4.1.2.1 | 150 |
| lineage4 | 2 |
| lineage2.2.1 | 40 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.3 | 9 |
| lineage4.3.2.1 | 2 |
| lineage4.7 | 6 |
| lineage4.5 | 11 |
| lineage4.9 | 3 |
| lineage4.4 | 2 |
| lineage4.3.4.1 | 5 |
| lineage4.8 | 14 |
| lineage4.2.1 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.1.2.1;lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.1.3 | 4 |
| lineage4.4.2 | 4 |
| lineage4.1 | 8 |
| lineage2.2.2 | 7 |
| lineage4.6.1.2 | 2 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.3.4.1 | 1 |
| lineage6.2.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 290 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11488501 | MDR-TB | lineage4.3.4.2 | None | ERR11488757 | MDR-TB | lineage4.1.2.1 | None | ERR4829374 | MDR-TB | lineage4.1.2.1 | it | SRR29274280 | Pre-XDR-TB | lineage4 | None | ERR13266438 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827946 | HR-TB | lineage4 | None | ERR11488602 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488838 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR25206880 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785354 | MDR-TB | lineage4.3.4.2.1 | None | ERR13284710 | MDR-TB | lineage4.3.3 | None | ERR13260488 | HR-TB | lineage4.3.2.1 | None | SRR20139554 | HR-TB | lineage4.1.2.1 | None | ERR13276036 | MDR-TB | lineage4.3.3 | None | SRR29051533 | HR-TB | lineage4.7 | None | ERR11466502 | MDR-TB | lineage4.1.2.1 | None | SRR15316587 | MDR-TB | lineage2.2.1 | None | ERR7361998 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR20139570 | HR-TB | lineage4.1.2.1 | None | ERR11069084 | MDR-TB | lineage4.1.2.1 | None | SRR6824373 | MDR-TB | lineage4.5 | cn | SRR29356698 | HR-TB | lineage4.3.3 | None | ERR13262023 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488601 | MDR-TB | lineage4.1.2.1 | None | SRR12420258 | HR-TB | lineage2.2.1 | None | ERR13284560 | MDR-TB | lineage4.1.2.1 | None | ERR13265423 | HR-TB | lineage2.2.1 | None | ERR13254202 | Pre-XDR-TB | lineage4.9 | None | ERR11081205 | MDR-TB | lineage4.4 | None | ERR2515246 | MDR-TB | lineage4.1.2.1 | za | ERR4020199 | MDR-TB | lineage4.1.2.1 | None | ERR11488883 | MDR-TB | lineage4.1.2.1 | None | ERR11252556 | MDR-TB | lineage4.1.2.1 | None | SRR6824586 | MDR-TB | lineage2.2.1 | cn | SRR28351472 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785276 | MDR-TB | lineage4.7 | None | ERR2707010 | MDR-TB | lineage4.3.4.1 | cd | ERR1555048 | MDR-TB | lineage4.8 | None | ERR11488894 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4811331 | MDR-TB | lineage2.2.1 | cn | SRR12420742 | Pre-XDR-TB | lineage2.2.1 | None | SRR15399238 | HR-TB | lineage4.3.4.2 | None | SRR15368748 | MDR-TB | lineage2.2.1 | None | ERR11488504 | MDR-TB | lineage4.1.2.1 | None | ERR11488596 | MDR-TB | lineage4.1.2.1 | None | ERR11488648 | MDR-TB | lineage4.1.2.1 | None | ERR11488327 | MDR-TB | lineage4.1.2.1 | None | ERR11488652 | MDR-TB | lineage4.1.2.1 | None | ERR11488453 | MDR-TB | lineage4.1.2.1 | None | ERR11488357 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488507 | MDR-TB | lineage4.1.2.1 | None | SAMN02403638 | MDR-TB | lineage4.1.2.1 | za | ERR10748490 | MDR-TB | lineage4.1.2.1 | None | ERR13289365 | MDR-TB | lineage4.1.2.1 | None | ERR8773994 | MDR-TB | lineage4.2.1 | None | SRR15315949 | HR-TB | lineage2.2.1.1 | None | SRR1165318 | MDR-TB | lineage4.1.2.1 | None | SRR25206951 | MDR-TB | lineage2.2.1.1 | None | ERR4809284 | MDR-TB | lineage4.1.2.1 | za | ERR11043526 | MDR-TB | lineage2.2.1 | None | ERR8773996 | MDR-TB | lineage4.2.1 | None | ERR11488503 | MDR-TB | lineage4.1.2.1 | None | ERR11488679 | MDR-TB | lineage4.1.2.1 | None | ERR11488788 | MDR-TB | lineage4.1.2.1 | None | SRR2101598 | MDR-TB | lineage4.1.2.1 | None | ERR4025132 | MDR-TB | lineage4.1.2.1 | None | SRR16088216 | HR-TB | lineage4.8 | None | SRR5818616 | MDR-TB | lineage2.2.1 | dj | ERR2179659 | MDR-TB | lineage4.5 | None | SRR25206940 | MDR-TB | lineage2.2.1 | None | ERR9119834 | MDR-TB | lineage4.1.2.1 | None | ERR11488563 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6982487 | MDR-TB | lineage4.1.2.1 | None | ERR11488362 | MDR-TB | lineage4.1.2.1 | None | SRR1167295 | MDR-TB | lineage4.1.2.1 | None | SRR29440906 | HR-TB | lineage4.3.3 | None | ERR4809280 | MDR-TB | lineage4.3.4.2.1 | za | ERR3284105 | Pre-XDR-TB | lineage2.2.1 | None | SRR11845661 | HR-TB | lineage4.8 | None | ERR11488852 | MDR-TB | lineage4.1.2.1 | None | ERR11488465 | MDR-TB | lineage4.1.2.1 | None | ERR11466253 | MDR-TB | lineage4.1.2.1 | None | ERR11488825 | MDR-TB | lineage4.1.2.1 | None | ERR11488604 | MDR-TB | lineage4.1.2.1 | None | SRR11349209 | MDR-TB | lineage4.1.2.1 | None | ERR4809353 | MDR-TB | lineage4.1.2.1 | za | ERR551537 | MDR-TB | lineage4.1.2.1;lineage4.3.4.2 | sz | ERR4423644 | MDR-TB | lineage4.6.2.2 | None | SRR29385398 | MDR-TB | lineage4.5 | None | SRR1723905 | MDR-TB | lineage4.5 | None | ERR11043393 | MDR-TB | lineage4.8 | None | ERR4423745 | MDR-TB | lineage4.1.2.1 | None | SRR6930910 | MDR-TB | lineage4.1.1.3 | None | ERR8975449 | HR-TB | lineage4.3.4.2.1 | None | ERR10610078 | HR-TB | lineage4.1.2.1 | None | ERR11488891 | MDR-TB | lineage4.1.2.1 | None | ERR11488905 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1723983 | MDR-TB | lineage4.4.2 | cn | ERR2515210 | MDR-TB | lineage4.1.2.1 | za | ERR9806713 | MDR-TB | lineage4.1.1.3 | None | ERR11489024 | MDR-TB | lineage4.1.2.1 | None | SRR24223029 | HR-TB | lineage4.3.3 | None | ERR11252653 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488828 | MDR-TB | lineage4.1.2.1 | None | ERR13285133 | MDR-TB | lineage2.2.1 | None | DRR130181 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488673 | MDR-TB | lineage4.1.2.1 | None | DRR130180 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285054 | MDR-TB | lineage4.1.2.1 | None | ERR7361997 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4423756 | MDR-TB | lineage4.1.2.1 | None | ERR11488793 | MDR-TB | lineage4.1.2.1 | None | ERR11488441 | MDR-TB | lineage4.1.2.1 | None | SRR20139559 | HR-TB | lineage4.1.2.1 | None | SRR10869182 | MDR-TB | lineage4.1.2.1 | None | ERR11082103 | MDR-TB | lineage4.1 | None | SAMEA2534034 | MDR-TB | lineage4.1 | None | SRR29231658 | MDR-TB | lineage4.3.4.1 | None | SRR29050744 | MDR-TB | lineage4.3.4.1 | None | ERR11488893 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8923693 | MDR-TB | lineage4.8 | None | SRR25207147 | MDR-TB | lineage2.2.1 | None | ERR11488598 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR130118 | Pre-XDR-TB | lineage4.9 | None | ERR13191375 | MDR-TB | lineage2.2.2 | None | SAMN02360608 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1049054 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049055 | Pre-XDR-TB | lineage2.2.2 | None | ERR11488581 | MDR-TB | lineage4.1.2.1 | None | SRR20139556 | HR-TB | lineage4.1.2.1 | None | ERR551568 | MDR-TB | lineage4.1 | None | ERR11489064 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11775078 | MDR-TB | lineage4.1.2.1 | None | ERR11488361 | MDR-TB | lineage4.1.2.1 | None | ERR11488960 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR1555047 | MDR-TB | lineage4.8 | None | ERR4423743 | MDR-TB | lineage4.1.2.1 | None | ERR7911191 | MDR-TB | lineage4.1.2.1 | za | ERR11043901 | MDR-TB | lineage4.3.3 | None | ERR9806693 | MDR-TB | lineage4.5 | None | SRR3085339 | MDR-TB | lineage2.2.1 | None | ERR4811509 | HR-TB | lineage4.4.2 | cn | ERR11489010 | MDR-TB | lineage4.1.2.1 | None | SRR26331606 | MDR-TB | lineage4.1.2.1 | None | ERR551569 | MDR-TB | lineage4.1 | None | ERR10748478 | MDR-TB | lineage4.1.2.1 | None | ERR11069020 | MDR-TB | lineage4.7 | None | ERR11488447 | MDR-TB | lineage4.1.2.1 | None | ERR4811296 | MDR-TB | lineage2.2.1.1 | cn | ERR13265358 | HR-TB | lineage2.2.1 | None | DRR130076 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824473 | MDR-TB | lineage2.2.1 | cn | ERR8975483 | MDR-TB | lineage4.1.2.1 | None | SRR21277573 | MDR-TB | lineage2.2.1 | None | ERR10610068 | MDR-TB | lineage4.5 | None | ERR4811306 | MDR-TB | lineage2.2.1 | cn | ERR8774466 | HR-TB | lineage4.1.2.1 | None | SRR19276622 | MDR-TB | lineage2.2.1 | None | ERR11489066 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR551045 | MDR-TB | lineage4.1.2.1 | sz | ERR4811327 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2515554 | MDR-TB | lineage4.1.2.1 | None | ERR7737812 | MDR-TB | lineage4.1.2.1 | None | ERR10748360 | MDR-TB | lineage4.1.2.1 | None | ERR5865940 | MDR-TB | lineage4.8 | None | ERR11488675 | MDR-TB | lineage4.1.2.1 | None | ERR11488482 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488571 | MDR-TB | lineage4.3.3 | None | ERR11488865 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR038750 | MDR-TB | lineage4.6.1.2 | ug | ERR11488487 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2515284 | MDR-TB | lineage4.1.2.1 | za | ERR2653080 | MDR-TB | lineage4.3.4.1 | None | ERR11488466 | MDR-TB | lineage4.1.2.1 | None | ERR13195541 | MDR-TB | lineage2.2.2 | None | ERR10610371 | MDR-TB | lineage4.1.1.3 | None | ERR4817562 | HR-TB | lineage4.5 | gb | ERR11488804 | MDR-TB | lineage4.1.2.1 | None | ERR4827606 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR551569_ERR551568 | MDR-TB | lineage4.1 | None | ERR4423755 | HR-TB | lineage4.1.2.1 | None | ERR2515335 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR13284719 | MDR-TB | lineage4.3.3 | None | SRR29772456 | MDR-TB | lineage2.2.1 | None | ERR13284892 | MDR-TB | lineage4.1 | None | ERR2514558 | HR-TB | lineage4.8 | gb | ERR11081924 | MDR-TB | lineage4.1.2.1 | None | ERR11488413 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR17657993 | MDR-TB | lineage4.1.2.1 | None | ERR11488774 | MDR-TB | lineage1.1.3.1 | None | ERR8774274 | MDR-TB | lineage4.6.2.2 | None | SRR9224919 | MDR-TB | lineage4.3.4.1 | None | SRR29831048 | HR-TB | lineage4.1.2.1 | None | SRR20139571 | HR-TB | lineage4.1.2.1 | None | SRR25207279 | Pre-XDR-TB | lineage2.2.1 | None | SRR5073927 | HR-TB | lineage2.2.1.1 | vn | ERR11488937 | MDR-TB | lineage4.1.2.1 | None | ERR11488756 | MDR-TB | lineage4.1.2.1 | None | ERR11488956 | MDR-TB | lineage4.1.2.1 | None | SRR11845662 | HR-TB | lineage4.8 | None | SRR1723883 | HR-TB | lineage2.2.1 | cn | SRR29055872 | MDR-TB | lineage4.1.2.1 | None | ERR11488846 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1173582 | MDR-TB | lineage4.1.2.1 | None | ERR9992864 | MDR-TB | lineage4.1.2.1 | None | ERR038740 | MDR-TB | lineage4.6.1.2 | ug | SRR7069297 | HR-TB | lineage4.8 | None | ERR4827695 | HR-TB | lineage2.2.1 | None | ERR11488912 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488769 | MDR-TB | lineage4.1.2.1 | None | ERR13291007 | MDR-TB | lineage2.2.1 | None | ERR10680071 | MDR-TB | lineage4.4.1.1 | None | ERR11488855 | MDR-TB | lineage4.1.2.1 | None | ERR10610348 | HR-TB | lineage4.5 | None | ERR5917737 | HR-TB | lineage4.1.2.1 | by | SRR29096478 | MDR-TB | lineage4.3.2.1 | None | ERR11080883 | MDR-TB | lineage4.3.3 | None | ERR11082857 | MDR-TB | lineage2.2.1;lineage4.3.4.1 | None | ERR11488477 | MDR-TB | lineage4.1.2.1 | None | ERR11488331 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488508 | MDR-TB | lineage4.1.2.1 | None | ERR4822359 | Pre-XDR-TB | lineage4.9 | None | ERR13285038 | MDR-TB | lineage4.7 | None | SRR1013658 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013659 | Pre-XDR-TB | lineage2.2.2 | None | ERR11488930 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10680081 | MDR-TB | lineage6.2.2 | None | ERR6362566 | MDR-TB | lineage4.1.2.1 | None | ERR4809003 | MDR-TB | lineage4.1.2.1 | None | SRR11033684 | HR-TB | lineage4.8 | None | ERR4813789 | MDR-TB | lineage4.1.2.1 | br | ERR8774468 | MDR-TB | lineage4.1.2.1 | None | ERR11488486 | MDR-TB | lineage4.1.2.1 | None | ERR11488731 | MDR-TB | lineage4.1.2.1 | None | ERR11488662 | MDR-TB | lineage4.1.2.1 | None | ERR9125308 | HR-TB | lineage4.8 | None | ERR11466281 | MDR-TB | lineage4.1.2.1 | None | ERR11488927 | MDR-TB | lineage4.1.2.1 | None | ERR11488766 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11043636 | MDR-TB | lineage4.7 | None | SRR1723776 | MDR-TB | lineage2.2.1 | cn | ERR9806619 | MDR-TB | lineage4.1.2.1 | None | ERR13285126 | MDR-TB | lineage4.8 | None | ERR9806688 | MDR-TB | lineage4.1.2.1 | None | ERR11488854 | MDR-TB | lineage4.1.2.1 | None | ERR3148062 | MDR-TB | lineage4.1 | None | ERR11488468 | MDR-TB | lineage4.1.2.1 | None | SRR3082088 | MDR-TB | lineage2.2.1 | None | ERR11488354 | MDR-TB | lineage4.1.2.1 | None | ERR552010 | MDR-TB | lineage4.1.2.1 | sz | ERR11488417 | MDR-TB | lineage4.1.2.1 | None | SRR6824683 | MDR-TB | lineage4.4.2 | cn | ERR11488336 | MDR-TB | lineage4.1.2.1 | None | ERR4809230 | MDR-TB | lineage4.1.1.3 | za | ERR13285143 | MDR-TB | lineage4.7 | None | ERR6866043 | MDR-TB | lineage4.1.2.1 | None | SRR1173548 | MDR-TB | lineage4.1.2.1 | None | SRR21276913 | HR-TB | lineage2.2.1.1 | None | SRR1723904 | MDR-TB | lineage4.5 | None | ERR11489053 | MDR-TB | lineage4.1.2.1 | None | ERR11488386 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8651638 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11488595 | MDR-TB | lineage4.1.2.1 | None | ERR11488644 | MDR-TB | lineage4.1.2.1 | None | SRR25207354 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488720 | MDR-TB | lineage4.1.2.1 | None | ERR11488516 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR671767 | MDR-TB | lineage4.5 | cn | SRR15723202 | MDR-TB | lineage2.2.1 | None | ERR2515165 | MDR-TB | lineage4.1.2.1 | za | SRR20139555 | HR-TB | lineage4.1.2.1 | None | ERR4020200 | MDR-TB | lineage4.1.2.1 | None | ERR11488687 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488509 | MDR-TB | lineage4.1.2.1 | None | SAMN03246621 | MDR-TB | lineage4.5 | None | ERR9993095 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | ERR11488645 | MDR-TB | lineage4.1.2.1 | None | ERR10680157 | MDR-TB | lineage4.8 | None | ERR13258451 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284953 | MDR-TB | lineage4.4 | None | ERR13288778 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4811612 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11488341 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488510 | MDR-TB | lineage4.1.2.1 | None | ERR2179651 | MDR-TB | lineage4.4.2 | cn | SRR15316141 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349136 | MDR-TB | lineage4.1.2.1 | None | SRR29385325 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR13284899 | MDR-TB | lineage4.1 | None |
|---|
