Rv2428 - c.-57C>T
Drug resistance types
0 Sensitive
0 RR-TB
23 HR-TB
116 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 24 |
| lineage4.1.2.1 | 60 |
| lineage2.2.1.1 | 4 |
| lineage4.3.4.1;lineage2.2.1 | 1 |
| lineage4.7 | 3 |
| lineage4.3.3 | 2 |
| lineage4.4 | 1 |
| lineage4.1 | 5 |
| lineage4.5 | 9 |
| 2 | |
| lineage4.1.1.3 | 4 |
| lineage4.9 | 4 |
| lineage4.8 | 10 |
| lineage4.4.2 | 4 |
| lineage4.3.4.2;lineage4.1.2.1 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.8;lineage2.2.1 | 1 |
| lineage4 | 1 |
| lineage2.2.2 | 4 |
| lineage4.3.4.2.1 | 3 |
| lineage6.2.2 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 4 |
| lineage4.2.1 | 2 |
| lineage2.2 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 158 |
Geographic prevalence
Country level data for this variant is available for 41 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19276622 | MDR-TB | lineage2.2.1 | None | SRR20139570 | HR-TB | lineage4.1.2.1 | None | SRR20139556 | HR-TB | lineage4.1.2.1 | None | SRR20139559 | HR-TB | lineage4.1.2.1 | None | SRR20139555 | HR-TB | lineage4.1.2.1 | None | SRR20139554 | HR-TB | lineage4.1.2.1 | None | SRR20139571 | HR-TB | lineage4.1.2.1 | None | SRR2101598 | MDR-TB | lineage4.1.2.1 | None | SRR21276913 | HR-TB | lineage2.2.1.1 | None | ERR11082857 | MDR-TB | lineage4.3.4.1;lineage2.2.1 | None | SRR21277573 | MDR-TB | lineage2.2.1 | None | ERR11069020 | MDR-TB | lineage4.7 | None | ERR11080883 | MDR-TB | lineage4.3.3 | None | ERR11081205 | MDR-TB | lineage4.4 | None | ERR11081924 | MDR-TB | lineage4.1.2.1 | None | ERR11069084 | MDR-TB | lineage4.1.2.1 | None | ERR11082103 | MDR-TB | lineage4.1 | None | ERR10610078 | MDR-TB | lineage4.1.2.1 | None | ERR9806619 | MDR-TB | lineage4.1.2.1 | None | ERR9806693 | MDR-TB | lineage4.5 | None | ERR10610362 | MDR-TB | None | ERR10610348 | MDR-TB | lineage4.5 | None | ERR10610371 | MDR-TB | lineage4.1.1.3 | None | ERR10610359 | HR-TB | lineage4.9 | None | ERR9806688 | MDR-TB | lineage4.1.2.1 | None | ERR10610182 | MDR-TB | lineage4.1.2.1 | None | ERR9806713 | MDR-TB | lineage4.1.1.3 | None | ERR9806754 | HR-TB | lineage4.9 | None | ERR9806758 | MDR-TB | None | ERR10610069 | MDR-TB | lineage4.5 | None | ERR10610068 | MDR-TB | lineage4.5 | None | ERR551045 | MDR-TB | lineage4.1.2.1 | sz | ERR551568 | MDR-TB | lineage4.1 | None | ERR551569 | MDR-TB | lineage4.1 | None | ERR4813789 | MDR-TB | lineage4.1.2.1 | br | SRR3082088 | MDR-TB | lineage2.2.1 | None | ERR1555048 | MDR-TB | lineage4.8 | None | ERR1555047 | MDR-TB | lineage4.8 | None | SRR3085339 | MDR-TB | lineage2.2.1 | None | ERR552010 | MDR-TB | lineage4.1.2.1 | sz | SAMN02403638 | MDR-TB | lineage4.1.2.1 | za | ERR2179651 | MDR-TB | lineage4.4.2 | cn | ERR2179659 | MDR-TB | lineage4.5 | None | SRR1723905_SRR1723904 | MDR-TB | lineage4.5 | None | ERR551537 | MDR-TB | lineage4.3.4.2;lineage4.1.2.1 | sz | ERR4817562 | HR-TB | lineage4.5 | gb | SRR5073927 | HR-TB | lineage2.2.1.1 | vn | SRR1723983 | MDR-TB | lineage4.4.2 | cn | SRR1723883 | HR-TB | lineage2.2.1 | cn | SAMEA2534034 | MDR-TB | lineage4.1 | None | ERR2515284 | MDR-TB | lineage4.1.2.1 | za | ERR2515335 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515554 | MDR-TB | lineage4.1.2.1 | None | ERR2514558 | HR-TB | lineage4.8 | gb | ERR2653080 | MDR-TB | lineage4.3.4.1 | None | ERR2515246 | MDR-TB | lineage4.1.2.1 | za | ERR2515165 | MDR-TB | lineage4.1.2.1 | za | ERR2515210 | MDR-TB | lineage4.1.2.1 | za | SRR6785276 | MDR-TB | lineage4.7 | None | ERR2653175 | MDR-TB | lineage4.1.2.1 | None | ERR4829374 | MDR-TB | lineage4.1.2.1 | it | ERR2707010 | MDR-TB | lineage4.3.4.1 | cd | ERR4827606 | MDR-TB | lineage4.8;lineage2.2.1 | None | ERR4827695 | HR-TB | lineage2.2.1 | None | ERR4827946 | HR-TB | lineage4 | None | ERR4822359 | Pre-XDR-TB | lineage4.9 | None | SRR5818616 | MDR-TB | lineage2.2.1 | dj | SAMN02360608 | Pre-XDR-TB | lineage2.2.2 | kr | ERR3148062 | MDR-TB | lineage4.1 | None | SRR671767 | MDR-TB | lineage4.5 | cn | SRR1723776 | MDR-TB | lineage2.2.1 | cn | SRR6982487 | MDR-TB | lineage4.1.2.1 | None | SRR6785354 | MDR-TB | lineage4.3.4.2.1 | None | SRR6930910 | MDR-TB | lineage4.1.1.3 | None | SRR6824373 | MDR-TB | lineage4.5 | cn | SRR6824473 | MDR-TB | lineage2.2.1 | cn | SRR6824586 | MDR-TB | lineage2.2.1 | cn | ERR10680081 | MDR-TB | lineage6.2.2 | None | SRR8651638 | Pre-XDR-TB | lineage2.2.1 | cn | DRR130076 | Pre-XDR-TB | lineage2.2.1 | None | DRR130180 | Pre-XDR-TB | lineage2.2.1 | None | ERR038740 | MDR-TB | lineage4.6.1.2 | ug | SRR6824683 | MDR-TB | lineage4.4.2 | cn | SRR8923693 | MDR-TB | lineage4.8 | None | SRR9224919 | MDR-TB | lineage4.3.4.1 | None | DRR130118 | Pre-XDR-TB | lineage4.9 | None | DRR130181 | Pre-XDR-TB | lineage2.2.1 | None | ERR038750 | MDR-TB | lineage4.6.1.2 | ug | ERR10680071 | MDR-TB | lineage4.4.1.1 | None | ERR10680157 | MDR-TB | lineage4.8 | None | ERR10748478 | MDR-TB | lineage4.1.2.1 | None | ERR10748360 | MDR-TB | lineage4.1.2.1 | None | ERR11043636 | MDR-TB | lineage4.7 | None | ERR10748490 | MDR-TB | lineage4.1.2.1 | None | ERR11043393 | MDR-TB | lineage4.8 | None | ERR11043526 | MDR-TB | lineage2.2.1 | None | ERR3284105 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043901 | MDR-TB | lineage4.3.3 | None | ERR4423645 | MDR-TB | lineage4.6.2.2 | None | ERR4020199 | MDR-TB | lineage4.1.2.1 | None | ERR4020200 | MDR-TB | lineage4.1.2.1 | None | ERR4025132 | MDR-TB | lineage4.1.2.1 | None | ERR4423644 | MDR-TB | lineage4.6.2.2 | None | ERR4423755 | MDR-TB | lineage4.1.2.1 | None | ERR4423756 | MDR-TB | lineage4.1.2.1 | None | ERR4423743 | MDR-TB | lineage4.1.2.1 | None | ERR4423745 | MDR-TB | lineage4.1.2.1 | None | ERR4809230 | MDR-TB | lineage4.1.1.3 | za | ERR4809003 | MDR-TB | lineage4.1.2.1 | None | ERR4811327 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4809284 | MDR-TB | lineage4.1.2.1 | za | ERR4809353 | MDR-TB | lineage4.1.2.1 | za | ERR4811296 | MDR-TB | lineage2.2.1.1 | cn | ERR4811331 | MDR-TB | lineage2.2.1 | cn | ERR4809280 | MDR-TB | lineage4.3.4.2.1 | za | ERR4811306 | MDR-TB | lineage2.2.1 | cn | ERR5865940 | MDR-TB | lineage4.8 | None | ERR4811509 | HR-TB | lineage4.4.2 | cn | ERR4811612 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5917737 | HR-TB | lineage4.1.2.1 | by | ERR7361998 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR6362566 | MDR-TB | lineage4.1.2.1 | None | ERR6866043 | MDR-TB | lineage4.1.2.1 | None | ERR7361997 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8774466 | MDR-TB | lineage4.1.2.1 | None | ERR8773994 | MDR-TB | lineage4.2.1 | None | ERR8774468 | MDR-TB | lineage4.1.2.1 | None | ERR7737812 | MDR-TB | lineage4.1.2.1 | None | ERR7911191 | MDR-TB | lineage4.1.2.1 | za | ERR8773996 | MDR-TB | lineage4.2.1 | None | ERR8774274 | MDR-TB | lineage4.6.2.2 | None | ERR8774275 | MDR-TB | lineage4.6.2.2 | None | ERR8975449 | HR-TB | lineage4.3.4.2.1 | None | ERR8975483 | MDR-TB | lineage4.1.2.1 | None | SRR1013659 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992864 | MDR-TB | lineage4.1.2.1 | None | ERR9993095 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9119834 | MDR-TB | lineage4.1.2.1 | None | SRR1013658 | Pre-XDR-TB | lineage2.2 | None | SRR10869182 | MDR-TB | lineage4.1.2.1 | None | SRR1049054 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049055 | Pre-XDR-TB | lineage2.2.2 | None | SRR1165318 | MDR-TB | lineage4.1.2.1 | None | SRR11033684 | HR-TB | lineage4.8 | None | SRR11349209 | MDR-TB | lineage4.1.2.1 | None | SRR11349136 | MDR-TB | lineage4.1.2.1 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR11845661 | HR-TB | lineage4.8 | None | SRR1167295 | MDR-TB | lineage4.1.2.1 | None | SRR1173548 | MDR-TB | lineage4.1.2.1 | None | SRR1173582 | MDR-TB | lineage4.1.2.1 | None | SRR11845662 | HR-TB | lineage4.8 | None | SRR15368748 | MDR-TB | lineage2.2.1 | None | SRR15316587 | MDR-TB | lineage2.2.1 | None | SRR15315949 | HR-TB | lineage2.2.1.1 | None | SRR15316141 | Pre-XDR-TB | lineage2.2.1 | None | SRR15399238 | HR-TB | lineage4.3.4.2 | None | SRR15723202 | MDR-TB | lineage2.2.1 | None |
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