Rv2428 - c.-57C>T


Drug resistance types
0 Sensitive 0 RR-TB 23 HR-TB 116 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 24
lineage4.1.2.1 60
lineage2.2.1.1 4
lineage4.3.4.1;lineage2.2.1 1
lineage4.7 3
lineage4.3.3 2
lineage4.4 1
lineage4.1 5
lineage4.5 9
2
lineage4.1.1.3 4
lineage4.9 4
lineage4.8 10
lineage4.4.2 4
lineage4.3.4.2;lineage4.1.2.1 1
lineage4.3.4.1 3
lineage4.8;lineage2.2.1 1
lineage4 1
lineage2.2.2 4
lineage4.3.4.2.1 3
lineage6.2.2 1
lineage4.6.1.2 2
lineage4.4.1.1 1
lineage4.6.2.2 4
lineage4.2.1 2
lineage2.2 1
lineage4.3.4.2 1
spoligotype Counts
spoligotype Count
None 158
Geographic prevalence
Country level data for this variant is available for 41 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19276622 MDR-TB lineage2.2.1 None
SRR20139570 HR-TB lineage4.1.2.1 None
SRR20139556 HR-TB lineage4.1.2.1 None
SRR20139559 HR-TB lineage4.1.2.1 None
SRR20139555 HR-TB lineage4.1.2.1 None
SRR20139554 HR-TB lineage4.1.2.1 None
SRR20139571 HR-TB lineage4.1.2.1 None
SRR2101598 MDR-TB lineage4.1.2.1 None
SRR21276913 HR-TB lineage2.2.1.1 None
ERR11082857 MDR-TB lineage4.3.4.1;lineage2.2.1 None
SRR21277573 MDR-TB lineage2.2.1 None
ERR11069020 MDR-TB lineage4.7 None
ERR11080883 MDR-TB lineage4.3.3 None
ERR11081205 MDR-TB lineage4.4 None
ERR11081924 MDR-TB lineage4.1.2.1 None
ERR11069084 MDR-TB lineage4.1.2.1 None
ERR11082103 MDR-TB lineage4.1 None
ERR10610078 MDR-TB lineage4.1.2.1 None
ERR9806619 MDR-TB lineage4.1.2.1 None
ERR9806693 MDR-TB lineage4.5 None
ERR10610362 MDR-TB None
ERR10610348 MDR-TB lineage4.5 None
ERR10610371 MDR-TB lineage4.1.1.3 None
ERR10610359 HR-TB lineage4.9 None
ERR9806688 MDR-TB lineage4.1.2.1 None
ERR10610182 MDR-TB lineage4.1.2.1 None
ERR9806713 MDR-TB lineage4.1.1.3 None
ERR9806754 HR-TB lineage4.9 None
ERR9806758 MDR-TB None
ERR10610069 MDR-TB lineage4.5 None
ERR10610068 MDR-TB lineage4.5 None
ERR551045 MDR-TB lineage4.1.2.1 sz
ERR551568 MDR-TB lineage4.1 None
ERR551569 MDR-TB lineage4.1 None
ERR4813789 MDR-TB lineage4.1.2.1 br
SRR3082088 MDR-TB lineage2.2.1 None
ERR1555048 MDR-TB lineage4.8 None
ERR1555047 MDR-TB lineage4.8 None
SRR3085339 MDR-TB lineage2.2.1 None
ERR552010 MDR-TB lineage4.1.2.1 sz
SAMN02403638 MDR-TB lineage4.1.2.1 za
ERR2179651 MDR-TB lineage4.4.2 cn
ERR2179659 MDR-TB lineage4.5 None
SRR1723905_SRR1723904 MDR-TB lineage4.5 None
ERR551537 MDR-TB lineage4.3.4.2;lineage4.1.2.1 sz
ERR4817562 HR-TB lineage4.5 gb
SRR5073927 HR-TB lineage2.2.1.1 vn
SRR1723983 MDR-TB lineage4.4.2 cn
SRR1723883 HR-TB lineage2.2.1 cn
SAMEA2534034 MDR-TB lineage4.1 None
ERR2515284 MDR-TB lineage4.1.2.1 za
ERR2515335 Pre-XDR-TB lineage4.1.2.1 za
ERR2515554 MDR-TB lineage4.1.2.1 None
ERR2514558 HR-TB lineage4.8 gb
ERR2653080 MDR-TB lineage4.3.4.1 None
ERR2515246 MDR-TB lineage4.1.2.1 za
ERR2515165 MDR-TB lineage4.1.2.1 za
ERR2515210 MDR-TB lineage4.1.2.1 za
SRR6785276 MDR-TB lineage4.7 None
ERR2653175 MDR-TB lineage4.1.2.1 None
ERR4829374 MDR-TB lineage4.1.2.1 it
ERR2707010 MDR-TB lineage4.3.4.1 cd
ERR4827606 MDR-TB lineage4.8;lineage2.2.1 None
ERR4827695 HR-TB lineage2.2.1 None
ERR4827946 HR-TB lineage4 None
ERR4822359 Pre-XDR-TB lineage4.9 None
SRR5818616 MDR-TB lineage2.2.1 dj
SAMN02360608 Pre-XDR-TB lineage2.2.2 kr
ERR3148062 MDR-TB lineage4.1 None
SRR671767 MDR-TB lineage4.5 cn
SRR1723776 MDR-TB lineage2.2.1 cn
SRR6982487 MDR-TB lineage4.1.2.1 None
SRR6785354 MDR-TB lineage4.3.4.2.1 None
SRR6930910 MDR-TB lineage4.1.1.3 None
SRR6824373 MDR-TB lineage4.5 cn
SRR6824473 MDR-TB lineage2.2.1 cn
SRR6824586 MDR-TB lineage2.2.1 cn
ERR10680081 MDR-TB lineage6.2.2 None
SRR8651638 Pre-XDR-TB lineage2.2.1 cn
DRR130076 Pre-XDR-TB lineage2.2.1 None
DRR130180 Pre-XDR-TB lineage2.2.1 None
ERR038740 MDR-TB lineage4.6.1.2 ug
SRR6824683 MDR-TB lineage4.4.2 cn
SRR8923693 MDR-TB lineage4.8 None
SRR9224919 MDR-TB lineage4.3.4.1 None
DRR130118 Pre-XDR-TB lineage4.9 None
DRR130181 Pre-XDR-TB lineage2.2.1 None
ERR038750 MDR-TB lineage4.6.1.2 ug
ERR10680071 MDR-TB lineage4.4.1.1 None
ERR10680157 MDR-TB lineage4.8 None
ERR10748478 MDR-TB lineage4.1.2.1 None
ERR10748360 MDR-TB lineage4.1.2.1 None
ERR11043636 MDR-TB lineage4.7 None
ERR10748490 MDR-TB lineage4.1.2.1 None
ERR11043393 MDR-TB lineage4.8 None
ERR11043526 MDR-TB lineage2.2.1 None
ERR3284105 Pre-XDR-TB lineage2.2.1 None
ERR11043901 MDR-TB lineage4.3.3 None
ERR4423645 MDR-TB lineage4.6.2.2 None
ERR4020199 MDR-TB lineage4.1.2.1 None
ERR4020200 MDR-TB lineage4.1.2.1 None
ERR4025132 MDR-TB lineage4.1.2.1 None
ERR4423644 MDR-TB lineage4.6.2.2 None
ERR4423755 MDR-TB lineage4.1.2.1 None
ERR4423756 MDR-TB lineage4.1.2.1 None
ERR4423743 MDR-TB lineage4.1.2.1 None
ERR4423745 MDR-TB lineage4.1.2.1 None
ERR4809230 MDR-TB lineage4.1.1.3 za
ERR4809003 MDR-TB lineage4.1.2.1 None
ERR4811327 Pre-XDR-TB lineage2.2.1 cn
ERR4809284 MDR-TB lineage4.1.2.1 za
ERR4809353 MDR-TB lineage4.1.2.1 za
ERR4811296 MDR-TB lineage2.2.1.1 cn
ERR4811331 MDR-TB lineage2.2.1 cn
ERR4809280 MDR-TB lineage4.3.4.2.1 za
ERR4811306 MDR-TB lineage2.2.1 cn
ERR5865940 MDR-TB lineage4.8 None
ERR4811509 HR-TB lineage4.4.2 cn
ERR4811612 Pre-XDR-TB lineage2.2.1 cn
ERR5917737 HR-TB lineage4.1.2.1 by
ERR7361998 Pre-XDR-TB lineage4.1.2.1 None
ERR6362566 MDR-TB lineage4.1.2.1 None
ERR6866043 MDR-TB lineage4.1.2.1 None
ERR7361997 Pre-XDR-TB lineage4.1.2.1 None
ERR8774466 MDR-TB lineage4.1.2.1 None
ERR8773994 MDR-TB lineage4.2.1 None
ERR8774468 MDR-TB lineage4.1.2.1 None
ERR7737812 MDR-TB lineage4.1.2.1 None
ERR7911191 MDR-TB lineage4.1.2.1 za
ERR8773996 MDR-TB lineage4.2.1 None
ERR8774274 MDR-TB lineage4.6.2.2 None
ERR8774275 MDR-TB lineage4.6.2.2 None
ERR8975449 HR-TB lineage4.3.4.2.1 None
ERR8975483 MDR-TB lineage4.1.2.1 None
SRR1013659 Pre-XDR-TB lineage2.2.2 None
ERR9992864 MDR-TB lineage4.1.2.1 None
ERR9993095 Pre-XDR-TB lineage4.1.2.1 None
ERR9119834 MDR-TB lineage4.1.2.1 None
SRR1013658 Pre-XDR-TB lineage2.2 None
SRR10869182 MDR-TB lineage4.1.2.1 None
SRR1049054 Pre-XDR-TB lineage2.2.2 None
SRR1049055 Pre-XDR-TB lineage2.2.2 None
SRR1165318 MDR-TB lineage4.1.2.1 None
SRR11033684 HR-TB lineage4.8 None
SRR11349209 MDR-TB lineage4.1.2.1 None
SRR11349136 MDR-TB lineage4.1.2.1 None
SRR11349188 MDR-TB lineage4.1.2.1 None
SRR11845661 HR-TB lineage4.8 None
SRR1167295 MDR-TB lineage4.1.2.1 None
SRR1173548 MDR-TB lineage4.1.2.1 None
SRR1173582 MDR-TB lineage4.1.2.1 None
SRR11845662 HR-TB lineage4.8 None
SRR15368748 MDR-TB lineage2.2.1 None
SRR15316587 MDR-TB lineage2.2.1 None
SRR15315949 HR-TB lineage2.2.1.1 None
SRR15316141 Pre-XDR-TB lineage2.2.1 None
SRR15399238 HR-TB lineage4.3.4.2 None
SRR15723202 MDR-TB lineage2.2.1 None