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SRA data
Rv2447c
- c.354G>C
Drug resistance types
0 Sensitive
0 RR-TB
16 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
lineage4.9
2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
M.canetti;lineage2.1;lineage4.9
2
1
La3;M.canetti;lineage2.1;lineage4.9
1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
1
M.canetti;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
21
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124651
MDR-TB
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124652
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR212001
HR-TB
None
ERR3283018
HR-TB
lineage4.9
None
ERR3797028
HR-TB
M.canetti;lineage4.9
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR4188350
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR4816466
HR-TB
lineage4.9
None
ERR5311102
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
Showing 1 to 10 of 21 entries
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