| lineage | Count |
|---|---|
| lineage2.2.1 | 437 |
| lineage4.1.2.1 | 4 |
| lineage4.3.2 | 1 |
| lineage3 | 6 |
| lineage4.3.4.2 | 3 |
| lineage2.2.1.1 | 13 |
| lineage2.2.1;lineage4.3.3 | 6 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage2.1 | 62 |
| lineage4.9 | 1 |
| lineage2.2.2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.1;lineage2.2.1 | 2 |
| lineage4.3.3 | 9 |
| lineage4.4.1.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.2.1 | 2 |
| lineage4.8 | 2 |
| lineage1.2.2.2;lineage3.1.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1;lineage4.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.1.1 | 1 |
| spoligotype | Count |
|---|---|
| None | 570 |
| ID | Drug resistance | Lineage | Country iso2 | ERR5864473 | Pre-XDR-TB | lineage2.2.1 | None | ERR9121700 | Other | lineage4.1.2.1 | None | ERR11082755 | HR-TB | lineage2.2.1 | None | ERR776664 | MDR-TB | lineage4.3.2 | None | ERR5866509 | MDR-TB | lineage2.2.1 | None | ERR4828123 | MDR-TB | lineage2.2.1 | None | ERR4827768 | HR-TB | lineage2.2.1 | None | ERR13276041 | MDR-TB | lineage2.2.1 | None | SRR29539640 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515371 | HR-TB | lineage2.2.1 | None | ERR3470691 | MDR-TB | lineage3 | None | ERR552045 | RR-TB | lineage2.2.1 | None | ERR3794405 | MDR-TB | lineage2.2.1 | None | SRR29681461 | HR-TB | lineage4.1.2.1 | None | ERR5864422 | MDR-TB | lineage2.2.1 | None | SRR8426987 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316399 | MDR-TB | lineage2.2.1 | None | ERR13284821 | MDR-TB | lineage2.2.1 | None | ERR9993163 | XDR-TB | lineage2.2.1 | None | ERR3273092 | MDR-TB | lineage2.2.1 | None | SRR13232555 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827723 | MDR-TB | lineage2.2.1 | None | ERR4828136 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865691 | MDR-TB | lineage2.2.1 | None | ERR552225 | MDR-TB | lineage2.2.1 | None | ERR2653092 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR10040295 | MDR-TB | lineage2.2.1.1 | None | SRR8364677 | MDR-TB | lineage2.2.1 | None | ERR550773 | MDR-TB | lineage2.2.1 | None | ERR11068171 | MDR-TB | lineage2.2.1 | None | SRR14801736 | HR-TB | lineage2.2.1 | None | SRR29539842 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827797 | MDR-TB | lineage2.2.1 | None | SRR29016747 | Other | lineage2.2.1.1 | None | SRR26399267 | HR-TB | lineage2.2.1.1 | None | ERR2307540 | MDR-TB | lineage2.2.1 | None | ERR552841_ERR552842 | MDR-TB | lineage2.2.1 | None | ERR2307525 | MDR-TB | lineage2.2.1 | None | ERR13284457 | MDR-TB | lineage2.2.1 | None | SRR1002689 | MDR-TB | lineage2.2.1 | None | ERR13276173 | MDR-TB | lineage2.2.1 | None | SRR1163172 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR16057914 | MDR-TB | lineage2.2.1 | None | SRR12142388 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385250 | MDR-TB | lineage2.2.1 | None | SRR28498376 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284395 | MDR-TB | lineage2.2.1 | None | ERR5866065 | MDR-TB | lineage2.2.1 | None | ERR3273177 | MDR-TB | lineage2.2.1 | None | ERR553064 | HR-TB | lineage2.2.1 | None | ERR3794428 | MDR-TB | lineage2.2.1 | None | SRR29539828 | MDR-TB | lineage2.2.1 | None | ERR229951 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR4827475 | MDR-TB | lineage2.2.1 | None | SRR25207091 | Pre-XDR-TB | lineage2.2.1 | None | SRR16089532 | MDR-TB | lineage2.2.1 | None | SRR10341356 | Pre-XDR-TB | lineage2.2.1 | None | ERR550985 | MDR-TB | lineage2.2.1 | None | SRR10040376 | MDR-TB | lineage2.2.1 | None | SRR8327263 | MDR-TB | lineage2.2.1 | None | ERR553251 | MDR-TB | lineage2.2.1 | None | SRR28888064 | XDR-TB | lineage2.2.1 | None | ERR552646 | MDR-TB | lineage2.2.1 | None | ERR7975644 | Pre-XDR-TB | lineage2.2.1 | None | SRR8360458 | MDR-TB | lineage2.2.1 | None | ERR4799210 | Pre-XDR-TB | lineage2.2.1 | in | SRR13232483 | MDR-TB | lineage2.2.1 | None | SRR24256255 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762415 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799716 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR29539855 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709887 | Pre-XDR-TB | lineage2.1 | th | SRR5709872 | Pre-XDR-TB | lineage2.1 | th | SRR5709934 | Pre-XDR-TB | lineage2.1 | th | SRR5709899 | Pre-XDR-TB | lineage2.1 | th | SRR5710027 | Pre-XDR-TB | lineage2.1 | th | SRR3205959 | Pre-XDR-TB | lineage2.1 | None | ERR552500 | MDR-TB | lineage2.2.1 | None | ERR4830160 | MDR-TB | lineage2.2.1 | None | ERR4830170 | HR-TB | lineage2.2.1 | None | ERR5865995 | MDR-TB | lineage2.2.1 | None | SRR25207341 | MDR-TB | lineage2.2.1 | None | ERR5866496 | MDR-TB | lineage2.2.1 | None | SRR27757528 | XDR-TB | lineage2.2.1 | None | ERR14708078 | Pre-XDR-TB | lineage4.9 | None | SRR12420479 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888065 | XDR-TB | lineage2.2.1 | None | SRR3086357 | MDR-TB | lineage2.2.1 | None | SRR28239436 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706398 | MDR-TB | lineage2.2.1 | None | SRR5306022 | Pre-XDR-TB | lineage2.2.1 | None | SRR28434979 | XDR-TB | lineage2.2.1 | None | ERR4831247 | MDR-TB | lineage2.2.1 | de | ERR5917704 | MDR-TB | lineage2.2.1 | by | ERR7911151 | Pre-XDR-TB | lineage2.2.2 | vn | SRR8379902 | MDR-TB | lineage2.2.1 | None | ERR4828979 | MDR-TB | lineage2.2.1 | None | ERR4827937 | MDR-TB | lineage2.2.1 | None | ERR5864472 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539274 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828101 | HR-TB | lineage2.2.1 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | ERR552434 | MDR-TB | lineage2.2.1 | None | ERR2600591 | Pre-XDR-TB | lineage2.2.1 | None | ERR13298158 | MDR-TB | lineage2.2.1 | None | SRR8433192 | MDR-TB | lineage2.2.1 | None | SRR6832837 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653117 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR13289495 | MDR-TB | lineage2.2.1 | None | ERR13275962 | MDR-TB | lineage2.2.1 | None | ERR13291212 | MDR-TB | lineage2.2.1 | None | SRR29274279 | MDR-TB | lineage2.2.1 | None | ERR5865514 | MDR-TB | lineage2.2.1 | None | ERR4827964 | MDR-TB | lineage2.2.1 | None | ERR551249_ERR551247_ERR551248 | MDR-TB | lineage2.2.1 | None | ERR552433 | MDR-TB | lineage2.2.1 | None | SRR5153242 | MDR-TB | lineage2.2.1 | None | ERR552434_ERR552433 | MDR-TB | lineage2.2.1 | None | SRR28888067 | XDR-TB | lineage2.2.1 | None | SRR29538875 | MDR-TB | lineage2.2.1 | None | SRR25827801 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291214 | MDR-TB | lineage2.2.1 | None | SRR8351971 | Pre-XDR-TB | lineage2.2.1 | None | SRR16089544 | MDR-TB | lineage2.2.1 | None | ERR5865994 | MDR-TB | lineage2.2.1 | None | SRR6831746 | MDR-TB | lineage2.2.1 | None | SRR29385490 | MDR-TB | lineage2.2.1 | None | ERR2307606 | MDR-TB | lineage2.2.1 | None | ERR13284091 | MDR-TB | lineage2.2.1 | None | ERR551295 | MDR-TB | lineage2.2.1 | None | ERR552501_ERR552500 | MDR-TB | lineage2.2.1 | None | SRR8369849 | Pre-XDR-TB | lineage2.2.1 | None | ERR552044_ERR552045_ERR552046 | MDR-TB | lineage2.2.1 | None | ERR2307435 | MDR-TB | lineage2.2.1 | None | ERR4828032 | MDR-TB | lineage2.2.1 | None | SRR10828195 | Pre-XDR-TB | lineage2.2.1 | None | ERR552302_ERR552301 | MDR-TB | lineage2.2.1 | None | ERR551827_ERR551826 | MDR-TB | lineage2.2.1 | None | ERR551167 | HR-TB | lineage2.2.1 | None | ERR4827887 | MDR-TB | lineage2.2.1 | None | SRR29053578 | MDR-TB | lineage2.2.1 | None | ERR552819_ERR552818 | MDR-TB | lineage2.2.1 | None | ERR551249 | MDR-TB | lineage2.2.1 | None | ERR3132088 | MDR-TB | lineage2.2.1 | None | SRR8357446 | MDR-TB | lineage2.2.1 | None | ERR4195431 | Other | lineage4.1.2.1 | None | SRR25515019 | HR-TB | lineage2.2.1 | None | ERR4798655 | Pre-XDR-TB | lineage2.2.1 | in | ERR5866064 | MDR-TB | lineage2.2.1 | None | ERR4828103 | MDR-TB | lineage2.2.1 | None | ERR4798865 | Other | lineage1.2.2.2 | in | ERR4827918 | MDR-TB | lineage2.2.1 | None | ERR551168 | HR-TB | lineage2.2.1 | None | ERR13284707 | MDR-TB | lineage2.2.1 | None | ERR13244687 | MDR-TB | lineage2.2.1 | None | ERR550658 | HR-TB | lineage2.2.1 | None | ERR4828034 | MDR-TB | lineage2.2.1 | None | SRR29051100 | HR-TB | lineage2.2.1.1 | None | SRR1169046 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR4827721 | MDR-TB | lineage2.2.1 | None | ERR4830056 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830155 | MDR-TB | lineage2.2.1;lineage4 | None | ERR11043036 | HR-TB | lineage2.2.1 | None | ERR4827735 | MDR-TB | lineage2.2.1 | None | SRR8442761 | MDR-TB | lineage2.2.1 | None | ERR4827673 | HR-TB | lineage2.2.1 | None | SRR12420465 | MDR-TB | lineage2.2.1 | None | SRR1172073 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR4800262 | HR-TB | lineage3 | in | ERR2307571 | HR-TB | lineage2.2.1 | None | ERR4828053 | MDR-TB | lineage2.2.1 | None | ERR550849 | MDR-TB | lineage2.2.1 | None | SRR28389841 | Other | lineage4.3.4.1 | None | SRR18500592 | MDR-TB | lineage2.2.1 | None | SRR28498481 | Pre-XDR-TB | lineage2.2.1 | None | ERR552226 | MDR-TB | lineage2.2.1 | None | ERR2935859 | HR-TB | lineage4.3.4.1 | None | SRR671781 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN07236516 | Pre-XDR-TB | lineage2.1 | None | SAMN07236535 | Pre-XDR-TB | lineage2.1 | None | SAMN07236537 | Pre-XDR-TB | lineage2.1 | None | SAMN07236526 | Pre-XDR-TB | lineage2.1 | None | SAMN07236539 | Pre-XDR-TB | lineage2.1 | None | SAMN07360953 | Pre-XDR-TB | lineage2.1 | None | SAMN14845215 | Pre-XDR-TB | lineage2.1 | None | SAMN14845213 | Pre-XDR-TB | lineage2.1 | None | SAMN13195583 | Pre-XDR-TB | lineage2.1 | None | SAMN13195582 | Pre-XDR-TB | lineage2.1 | None | SAMN07236515 | Pre-XDR-TB | lineage2.1 | None | SAMN07236522 | Pre-XDR-TB | lineage2.1 | None | SAMN07236261 | Pre-XDR-TB | lineage2.1 | None | SRR10341347 | Pre-XDR-TB | lineage2.1 | None | SRR10341352 | Pre-XDR-TB | lineage2.1 | None | SRR10341351 | MDR-TB | lineage2.1;lineage2.2.1 | None | SRR10341349 | Pre-XDR-TB | lineage2.1 | None | SRR10341353 | Pre-XDR-TB | lineage2.1 | None | SRR10828181 | MDR-TB | lineage2.1;lineage2.2.1 | None | SRR10828183 | Pre-XDR-TB | lineage2.1 | None | SRR10828203 | Pre-XDR-TB | lineage2.1 | None | SRR10828184 | Pre-XDR-TB | lineage2.1 | None | SRR10828191 | Pre-XDR-TB | lineage2.1 | None | SRR10394882 | Pre-XDR-TB | lineage2.1 | None | SRR10828193 | Pre-XDR-TB | lineage2.1 | None | SRR10828200 | Pre-XDR-TB | lineage2.1 | None | SRR10394883 | Pre-XDR-TB | lineage2.1 | None | SRR11715720 | Pre-XDR-TB | lineage2.1 | None | SRR11828973 | Pre-XDR-TB | lineage2.1 | th | SRR11828974 | Pre-XDR-TB | lineage2.1 | th | SRR11828975 | Pre-XDR-TB | lineage2.1 | th | SRR11662498 | Pre-XDR-TB | lineage2.1 | None | SRR11828976 | Pre-XDR-TB | lineage2.1 | th | SRR11828982 | Pre-XDR-TB | lineage2.1 | th | SRR11662417 | Pre-XDR-TB | lineage2.1 | None | SRR11715722 | Pre-XDR-TB | lineage2.1 | None | SRR11828983 | Pre-XDR-TB | lineage2.1 | th | SRR11715725 | Pre-XDR-TB | lineage2.1 | None | SRR11828989 | Pre-XDR-TB | lineage2.1 | th | SRR11828990 | Pre-XDR-TB | lineage2.1 | None | SRR12072597 | Pre-XDR-TB | lineage2.1 | None | SRR11715724 | Pre-XDR-TB | lineage2.1 | None | SRR12072600 | Pre-XDR-TB | lineage2.1 | None | SRR12072598 | Pre-XDR-TB | lineage2.1 | None | SRR12072599 | Pre-XDR-TB | lineage2.1 | None | SRR11828987 | Pre-XDR-TB | lineage2.1 | None | SRR11828988 | Pre-XDR-TB | lineage2.1 | None | SRR3205958 | Pre-XDR-TB | lineage2.1 | None | SRR5114017 | Pre-XDR-TB | lineage2.1 | None | SRR5114019 | Pre-XDR-TB | lineage2.1 | None | SRR5114018 | Pre-XDR-TB | lineage2.1 | None | SRR5114020 | Pre-XDR-TB | lineage2.1 | None | SRR5709764 | Pre-XDR-TB | lineage2.1 | th | SRR5114021 | Pre-XDR-TB | lineage2.1 | None | SRR5709798 | Pre-XDR-TB | lineage2.1 | th | SRR5837708 | Pre-XDR-TB | lineage2.1 | th | SRR5114022 | Pre-XDR-TB | lineage2.1 | None | SRR5709762 | Pre-XDR-TB | lineage2.1 | th | ERR4810476 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11081229 | Pre-XDR-TB | lineage2.2.1 | None | SRR28240098 | MDR-TB | lineage2.2.1 | None | SRR28888084 | XDR-TB | lineage2.2.1 | None | ERR4812843 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773820 | MDR-TB | lineage2.2.1 | None | SRR7516392 | MDR-TB | lineage2.2.1 | None | ERR11773819 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811346 | MDR-TB | lineage2.2.1 | cn | SRR28888078 | XDR-TB | lineage2.2.1 | None | ERR11773817 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498392 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830627 | MDR-TB | lineage2.2.1 | None | ERR4828452 | HR-TB | lineage2.2.1.1 | vn | ERR4830357 | HR-TB | lineage2.2.1.1 | vn | ERR4827691 | MDR-TB | lineage2.2.1 | None | SRR21732165 | HR-TB | lineage2.2.1 | None | ERR4830592 | MDR-TB | lineage2.2.1 | tm | ERR4830647 | MDR-TB | lineage2.2.1 | tm | ERR4827739 | MDR-TB | lineage2.2.1 | None | ERR4828022 | HR-TB | lineage2.2.1 | None | ERR552711 | MDR-TB | lineage2.2.1 | None | ERR5865152 | MDR-TB | lineage4.3.3 | None | SAMEA2534371 | MDR-TB | lineage2.2.1 | uz | SAMEA2533805 | MDR-TB | lineage2.2.1 | uz | SAMEA2535248 | MDR-TB | lineage2.2.1 | uz | ERR133908 | Pre-XDR-TB | lineage2.2.1 | ru | ERR228059 | Pre-XDR-TB | lineage2.2.1 | ru | ERR108450 | MDR-TB | lineage2.2.1 | ru | ERR2513013 | Other | lineage4.4.1.1 | gb | ERR11068679 | MDR-TB | lineage2.2.1 | None | ERR11082648 | Pre-XDR-TB | lineage2.2.1 | None | SRR27757527 | XDR-TB | lineage2.2.1 | None | ERR9907733 | MDR-TB | lineage4.1.1.3 | None | ERR13276414 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035089 | MDR-TB | lineage2.2.1 | vn | SRR8335314 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827435 | MDR-TB | lineage2.2.1 | None | ERR4827990 | MDR-TB | lineage2.2.1 | None | SRR28888063 | XDR-TB | lineage2.2.1 | None | ERR11773826 | Pre-XDR-TB | lineage2.2.1 | None | ERR550783 | HR-TB | lineage2.2.1 | None | ERR552951 | MDR-TB | lineage2.2.1 | None | ERR13284499 | MDR-TB | lineage2.2.1 | None | ERR13289500 | HR-TB | lineage2.2.1 | None | ERR7975631 | MDR-TB | lineage2.2.1 | None | SRR16089534 | MDR-TB | lineage2.2.1 | None | SRR18714969 | MDR-TB | lineage2.2.1 | None | SRR7070595 | Other | lineage4.4.1.1 | None | SRR6831814 | MDR-TB | lineage2.2.1 | None | SRR8380043 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715337 | Pre-XDR-TB | lineage2.2.1 | None | ERR551963 | MDR-TB | lineage2.2.1 | None | ERR552712_ERR552711 | MDR-TB | lineage2.2.1 | None | ERR550772 | MDR-TB | lineage2.2.1 | None | ERR9124921 | MDR-TB | lineage2.2.1 | None | SRR28888085 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888051 | XDR-TB | lineage4.3.3 | None | ERR552818 | MDR-TB | lineage2.2.1 | None | DRR473889 | HR-TB | lineage2.2.1.1 | None | ERR7737903 | MDR-TB | lineage3 | None | ERR11043753 | MDR-TB | lineage2.2.1 | None | SRR16088469 | MDR-TB | lineage2.2.1 | None | SRR24710032 | MDR-TB | lineage2.2.1 | None | SRR10040429 | MDR-TB | lineage2.2.1 | None | SRR24828609 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539369 | MDR-TB | lineage2.2.1 | None | ERR551237 | MDR-TB | lineage2.2.1 | None | ERR8665886 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307404 | MDR-TB | lineage2.2.1 | None | ERR552169 | MDR-TB | lineage2.2.1 | None | ERR5864428 | MDR-TB | lineage2.2.1 | None | ERR5866581 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276871 | MDR-TB | lineage2.2.1 | None | DRR130175 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832452 | MDR-TB | lineage2.2.1 | None | ERR5864423 | MDR-TB | lineage2.2.1 | None | ERR9907747 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13285881 | Pre-XDR-TB | lineage4.2.1 | None | SRR11972428 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864432 | MDR-TB | lineage2.2.1 | None | ERR5864424 | MDR-TB | lineage2.2.1 | None | ERR5865150 | MDR-TB | lineage4.3.3 | None | ERR5865151 | MDR-TB | lineage4.3.3 | None | ERR11082735 | MDR-TB | lineage2.2.1 | None | ERR7975642 | MDR-TB | lineage2.2.1 | None | ERR552148 | MDR-TB | lineage2.2.1 | None | ERR552645_ERR552646 | MDR-TB | lineage2.2.1 | None | ERR13291230 | MDR-TB | lineage2.2.1 | None | SRR18715339 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827566 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180388 | MDR-TB | lineage2.2.1 | None | ERR551035 | MDR-TB | lineage2.2.1 | None | ERR552301 | MDR-TB | lineage2.2.1 | None | SRR8369893 | MDR-TB | lineage2.2.1 | None | ERR550848_ERR550849 | MDR-TB | lineage2.2.1 | None | SRR1723838 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5866033 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802189 | MDR-TB | lineage2.2.1 | None | ERR3639803 | MDR-TB | lineage2.2.1 | None | SRR8354336 | MDR-TB | lineage2.2.1 | None | ERR551296 | MDR-TB | lineage2.2.1 | None | ERR5864425 | MDR-TB | lineage2.2.1 | None | SRR6832244 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291472 | HR-TB | lineage4.8 | None | SRR12142419 | HR-TB | lineage2.2.1 | None | ERR550848 | MDR-TB | lineage2.2.1 | None | ERR13284636 | MDR-TB | lineage2.2.1 | None | ERR4828031 | MDR-TB | lineage2.2.1 | None | SRR29356736 | MDR-TB | lineage2.2.1 | None | SRR25206923 | MDR-TB | lineage2.2.1 | None | SRR23938640 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828464 | Other | lineage2.2.1.1 | None | ERR4828455 | HR-TB | lineage2.2.1.1 | None | ERR3639698 | MDR-TB | lineage2.2.1 | None | ERR4828037 | MDR-TB | lineage2.2.1 | None | ERR551826 | MDR-TB | lineage2.2.1 | None | ERR551827 | MDR-TB | lineage2.2.1 | None | ERR552645 | MDR-TB | lineage2.2.1 | None | ERR5864433 | MDR-TB | lineage2.2.1 | None | SRR21576670 | MDR-TB | lineage2.2.1 | None | ERR11043974 | MDR-TB | lineage2.2.1 | None | ERR11798529 | MDR-TB | lineage2.2.1 | None | SAMEA2534554 | MDR-TB | lineage2.2.1 | uz | SAMEA2534644 | MDR-TB | lineage2.2.1 | uz | SAMEA2534691 | MDR-TB | lineage2.2.1 | uz | SAMEA2534793 | MDR-TB | lineage2.2.1 | uz | SAMEA2534842 | MDR-TB | lineage2.2.1 | uz | SAMEA2534925 | MDR-TB | lineage2.2.1 | uz | SAMEA2534945 | MDR-TB | lineage2.2.1 | uz | SAMEA2535024 | MDR-TB | lineage2.2.1 | uz | SRR2100283 | MDR-TB | lineage4.3.3 | None | SRR5709932 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709801 | Pre-XDR-TB | lineage2.2.1 | th | SAMEA2533465 | HR-TB | lineage2.2.1 | tm | ERR551554 | MDR-TB | lineage2.2.1 | None | SAMEA2533372 | HR-TB | lineage2.2.1 | uz | SAMEA2533751 | HR-TB | lineage2.2.1 | tm | SRR6832143 | MDR-TB | lineage2.2.1 | None | SRR8429777 | MDR-TB | lineage2.2.1 | None | ERR13273192 | MDR-TB | lineage2.2.1 | None | ERR13284281 | MDR-TB | lineage2.2.1 | None | ERR553063 | HR-TB | lineage2.2.1 | None | ERR5864434 | MDR-TB | lineage2.2.1 | None | ERR13291232 | MDR-TB | lineage2.2.1 | None | SAMN02419670 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | by | SRR28351250 | Pre-XDR-TB | lineage2.2.1 | None | ERR2843518 | HR-TB | lineage2.2.1.1 | None | ERR5864421 | MDR-TB | lineage2.2.1 | None | ERR3794525 | MDR-TB | lineage2.2.1 | None | SRR8354585 | MDR-TB | lineage2.2.1 | None | SRR6257088 | MDR-TB | lineage2.2.1 | None | ERR552712 | MDR-TB | lineage2.2.1 | None | SRR24256102 | MDR-TB | lineage2.2.1 | None | SRR3085257 | MDR-TB | lineage2.2.1 | None | ERR5864436 | MDR-TB | lineage2.2.1 | None | ERR5866034 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257096 | MDR-TB | lineage2.2.1 | None | ERR550782 | HR-TB | lineage2.2.1 | None | ERR553389 | MDR-TB | lineage2.2.1 | None | ERR553251_ERR553252 | MDR-TB | lineage2.2.1 | None | SRR8348431 | MDR-TB | lineage2.2.1 | None | SRR8369839 | MDR-TB | lineage2.2.1 | None | ERR4822550 | MDR-TB | lineage2.2.1 | None | SRR8427096 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827861 | Other | lineage1.2.2.2;lineage3.1.2.1 | None | ERR4828113 | MDR-TB | lineage2.2.1 | None | ERR4828115 | MDR-TB | lineage2.2.1 | None | ERR2307484 | MDR-TB | lineage2.2.1 | None | ERR552841 | MDR-TB | lineage2.2.1 | None | SRR5153269 | MDR-TB | lineage2.2.1 | None | ERR11773828 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069405 | MDR-TB | lineage2.2.1 | None | SRR7516322 | MDR-TB | lineage2.2.1 | None | ERR552819 | MDR-TB | lineage2.2.1 | None | ERR4195733 | Other | lineage4.1.2.1 | None | SRR29539316 | Other | lineage2.2.1 | None | ERR5864426 | MDR-TB | lineage2.2.1 | None | SRR29681372 | MDR-TB | lineage2.2.1 | None | ERR5864435 | MDR-TB | lineage2.2.1 | None | ERR4827425 | MDR-TB | lineage2.2.1 | None | ERR4828976 | MDR-TB | lineage2.2.1 | None | SRR16088168 | MDR-TB | lineage2.2.1 | None | ERR552302 | MDR-TB | lineage2.2.1 | None | ERR551844_ERR551845 | MDR-TB | lineage2.2.1 | None | SRR18715340 | Pre-XDR-TB | lineage2.2.1 | None | SRR29016894 | HR-TB | lineage2.2.1.1 | None | ERR13284138 | MDR-TB | lineage2.2.1 | None | SRR29539509 | Pre-XDR-TB | lineage2.2.1 | None | DRR188650 | HR-TB | lineage2.2.1 | None | SRR16089912 | HR-TB | lineage4.8 | None | ERR114434 | MDR-TB | lineage4.3.3 | None | ERR5864430 | MDR-TB | lineage2.2.1 | None | ERR551845 | MDR-TB | lineage2.2.1 | None | ERR552842 | MDR-TB | lineage2.2.1 | None | ERR5866508 | MDR-TB | lineage2.2.1 | None | SRR7069335 | Other | lineage3 | None | ERR5864429 | MDR-TB | lineage2.2.1 | None | SRR14801730 | MDR-TB | lineage2.2.1 | None | SRR8368702 | MDR-TB | lineage2.2.1 | None | SRR20969656 | MDR-TB | lineage2.2.1 | None | SRR24709892 | MDR-TB | lineage2.2.1 | None | SRR26112131 | HR-TB | lineage2.2.1 | None | ERR13290865 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715033 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819920 | MDR-TB | lineage3 | None | SRR8352463 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289437 | MDR-TB | lineage2.2.1 | None | ERR4827828 | HR-TB | lineage2.2.1 | None | SRR29681257 | MDR-TB | lineage2.2.1 | None | SRR29356683 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813152 | Pre-XDR-TB | lineage4.3.3 | None | ERR551295_ERR551296 | MDR-TB | lineage2.2.1 | None | SRR6458425 | MDR-TB | lineage2.2.1 | None | SRR29681398 | MDR-TB | lineage2.2.1 | None | ERR13289448 | MDR-TB | lineage2.2.1 | None | SRR25207345 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232544 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827785 | MDR-TB | lineage2.2.1 | None | ERR13246447 | HR-TB | lineage2.2.1 | None | SRR20969996 | MDR-TB | lineage2.2.1 | None | SRR29539539 | MDR-TB | lineage2.2.1 | None | SRR6257043 | MDR-TB | lineage2.2.1 | None | SRR16088069 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR28467051 | MDR-TB | lineage2.2.1 | None | ERR133916 | MDR-TB | lineage2.2.1 | ru | ERR2307441 | MDR-TB | lineage2.2.1 | None | SRR29538915 | Pre-XDR-TB | lineage2.2.1 | None | SRR29914419 | Pre-XDR-TB | lineage2.2.1 | None | SRR28858373 | Other | lineage1.2.1.2.1 | None | SRR29052957 | MDR-TB | lineage2.2.1 | None | ERR550773_ERR550772 | MDR-TB | lineage2.2.1 | None | ERR4799633 | Pre-XDR-TB | lineage2.2.1 | in | ERR551844 | MDR-TB | lineage2.2.1 | None | SRR18714963 | Pre-XDR-TB | lineage2.2.1 | None | DRR130183 | Pre-XDR-TB | lineage4.3.3 | None | ERR5864427 | MDR-TB | lineage2.2.1 | None | ERR13284767 | MDR-TB | lineage2.2.1 | None | ERR4799919 | Pre-XDR-TB | lineage3.1;lineage4.2.2 | in | ERR9907695 | MDR-TB | lineage4.1.1.3 | None | ERR552501 | MDR-TB | lineage2.2.1 | None | ERR4798411 | MDR-TB | lineage4.2.2.2 | in | ERR11775772 | MDR-TB | lineage2.2.1 | None | ERR4830103 | HR-TB | lineage2.2.1 | None | ERR552147 | MDR-TB | lineage2.2.1 | None | SRR18715197 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044429 | HR-TB | lineage1.1.2 | None | ERR552951_ERR552950 | MDR-TB | lineage2.2.1 | None | ERR5865515 | MDR-TB | lineage2.2.1 | None | ERR11773788 | MDR-TB | lineage2.2.1 | None | SRR28044341 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR28467044 | MDR-TB | lineage2.2.2 | None | ERR12916925 | XDR-TB | lineage2.2.1 | None | SRR28351404 | MDR-TB | lineage2.2.1 | None | ERR4830632 | MDR-TB | lineage2.2.1 | tm | SRR28888075 | XDR-TB | lineage2.2.1 | None | ERR4827696 | HR-TB | lineage2.2.1 | None | ERR552044 | MDR-TB | lineage2.2.1 | None | ERR5864420 | MDR-TB | lineage2.2.1 | None | SRR1163374 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR12420388 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380204 | MDR-TB | lineage2.2.1 | None | SRR12420341 | Pre-XDR-TB | lineage2.2.1 | None | SRR17856656 | HR-TB | lineage2.2.1.1 | None | SAMEA2533459 | MDR-TB | lineage2.2.1 | uz | SAMEA2533519 | MDR-TB | lineage2.2.1 | uz | SAMEA2533843 | MDR-TB | lineage2.2.1 | uz | SAMEA2534220 | MDR-TB | lineage2.2.1 | uz | SAMEA2534236 | MDR-TB | lineage2.2.1 | uz | SAMEA2534415 | MDR-TB | lineage2.2.1 | uz | ERR552113 | HR-TB | lineage2.2.1 | uz | SAMEA2534444 | MDR-TB | lineage2.2.1 | uz | SAMEA2534496 | MDR-TB | lineage2.2.1 | uz | ERR2677387 | Pre-XDR-TB | lineage2.2.1 | de | SRR5709869 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709891 | Pre-XDR-TB | lineage2.2.1 | th | ERR2199795 | HR-TB | lineage3 | de | SRR23938690 | MDR-TB | lineage2.2.1 | None | SRR6824615 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29539155 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772759 | MDR-TB | lineage1.1.2 | None | SRR6257029 | MDR-TB | lineage2.2.1 | ru | SRR16088470 | MDR-TB | lineage2.2.1 | None | ERR550659 | HR-TB | lineage2.2.1 | None | SRR8847016 | MDR-TB | lineage2.2.1 | None | ERR4827968 | MDR-TB | lineage2.2.1 | None | SRR5065515 | HR-TB | lineage2.2.1.1 | vn | SRR29093373 | MDR-TB | lineage2.2.1 | None | ERR552950 | MDR-TB | lineage2.2.1 | None | SRR28239847 | MDR-TB | lineage2.2.1 | None | SRR28435001 | Pre-XDR-TB | lineage2.2.1 | None | ERR1213858 | MDR-TB | lineage2.2.1 | kr | ERR5864471 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864468 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865692 | MDR-TB | lineage2.2.1 | None | SRR29093948 | MDR-TB | lineage2.2.1 | None | ERR4827822 | HR-TB | lineage2.2.1 | None | SRR8366173 | MDR-TB | lineage2.2.1 | None | ERR11043752 | MDR-TB | lineage2.2.1 | None | ERR4828055 | MDR-TB | lineage2.2.1 | None | ERR4827644 | HR-TB | lineage2.2.1 | None | SRR23252659 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR10828180 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832536 | MDR-TB | lineage2.2.1 | None | SRR28888070 | XDR-TB | lineage2.2.1 | None | SRR8346382 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830136 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762332 | Pre-XDR-TB | lineage4.2.1 | None | SRR24256042 | MDR-TB | lineage2.2.1 | None | SRR6785479 | MDR-TB | lineage2.2.1 | None | SRR24256161 | MDR-TB | lineage2.2.1 | None | SRR16370391 | Pre-XDR-TB | lineage2.2.2 | None | SRR18714845 | HR-TB | lineage2.2.1 | None | SRR18500603 | MDR-TB | lineage2.2.1 | None | SRR8380010 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864469 | Pre-XDR-TB | lineage2.2.1 | None | ERR552147_ERR552148 | MDR-TB | lineage2.2.1 | None | ERR2653135 | MDR-TB | lineage4.3.4.2 | None | SRR8354716 | MDR-TB | lineage2.2.1 | None | ERR4827886 | MDR-TB | lineage2.2.1 | None | ERR552226_ERR552225 | MDR-TB | lineage2.2.1 | None | ERR13273358 | MDR-TB | lineage2.2.1 | None | SRR7657749 | Pre-XDR-TB | lineage2.2.1 | None | ERR553252 | MDR-TB | lineage2.2.1 | None | ERR4827480 | HR-TB | lineage2.2.1 | None | SRR25515669 | HR-TB | lineage2.2.1 | None | ERR5864419 | MDR-TB | lineage2.2.1 | None | ERR5864431 | MDR-TB | lineage2.2.1 | None | ERR5864470 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276196 | MDR-TB | lineage2.2.1 | None | SRR20969451 | MDR-TB | lineage2.2.1 | None | SRR3085269 | MDR-TB | lineage2.2.1 | None | ERR13284506 | MDR-TB | lineage2.2.1 | None | ERR4407496 | MDR-TB | lineage2.2.1 | None |
|---|