Rv3197A - c.249C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
125 Sensitive
1 RR-TB
6 HR-TB
29 MDR-TB
10 Pre-XDR-TB
3 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 73 |
| lineage4.1 | 2 |
| lineage1.1.1.1 | 12 |
| lineage4.3.3 | 16 |
| lineage4 | 1 |
| lineage2.2.1;lineage4.2.1.1 | 1 |
| lineage4.1.2.1 | 22 |
| La2 | 1 |
| lineage4.8 | 19 |
| La1.2 | 1 |
| lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage3 | 4 |
| lineage4.4.2 | 1 |
| lineage1.1.1 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.9 | 3 |
| lineage2.1 | 1 |
| lineage4.2.1 | 4 |
| lineage4.1.1.1 | 3 |
| lineage2.2.1.1;lineage4.1.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.2.1.2.1 | 3 |
| lineage2.2.2 | 2 |
| lineage4.2.1.1 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1.2;lineage4.1.1.3 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 190 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR24083722 | Sensitive | lineage2.2.1 | None | SRR24710212 | MDR-TB | lineage2.2.1 | None | ERR11067945 | Sensitive | lineage4.1 | None | SRR24083699 | Sensitive | lineage2.2.1 | None | SRR24083632 | Other | lineage2.2.1 | None | SRR24083725 | Sensitive | lineage1.1.1.1 | None | SRR24083698 | Sensitive | lineage2.2.1 | None | SRR28239982 | Sensitive | lineage4.3.3 | None | ERR11067601 | Sensitive | lineage4 | None | SRR24083590 | Sensitive | lineage2.2.1 | None | SRR24083683 | Other | lineage1.1.1.1 | None | SRR24709910 | MDR-TB | lineage2.2.1 | None | SRR24256019 | Sensitive | lineage2.2.1;lineage4.2.1.1 | None | SRR24083649 | Sensitive | lineage2.2.1 | None | SRR24083684 | Sensitive | lineage1.1.1.1 | None | SRR25666644 | Sensitive | lineage4.1.2.1 | None | SRR16088048 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088122 | Sensitive | La2 | None | SRR23861924 | Sensitive | lineage4.8 | None | SRR24710280 | MDR-TB | lineage2.2.1 | None | ERR6198391 | Other | La1.2 | None | SRR25666603 | Sensitive | lineage4.1.2.1 | None | SRR28389882 | Sensitive | lineage4.1.2.1 | None | SRR24083634 | Sensitive | lineage1.1.1.1 | None | SRR24083713 | Sensitive | lineage2.1;lineage4.1.2.1 | None | SRR16088401 | Pre-XDR-TB | lineage2.2.1 | None | ERR11489006 | MDR-TB | lineage4.4.1.1 | None | SRR24710239 | MDR-TB | lineage2.2.1 | None | SRR28239633 | Sensitive | lineage4.3.3 | None | ERR11067867 | Sensitive | lineage3 | None | SRR24709945 | HR-TB | lineage2.2.1 | None | ERR11081466 | Sensitive | lineage4.1.2.1 | None | SRR28240008 | Pre-XDR-TB | lineage2.2.1 | None | SRR24083664 | Sensitive | lineage4.4.2 | None | SRR24083693 | Sensitive | lineage2.2.1 | None | SRR24083735 | Sensitive | lineage1.1.1 | None | SRR24083588 | Sensitive | lineage2.2.1 | None | SRR28389858 | Sensitive | lineage4.1.2.1 | None | SRR24083635 | Sensitive | lineage2.2.1.1 | None | SRR25666601 | Sensitive | lineage4.1.2.1 | None | SRR24083705 | Sensitive | lineage2.2.1 | None | SRR23861759 | Sensitive | lineage4.4.1.1 | None | SRR24083640 | Sensitive | lineage2.2.1 | None | SRR24710230 | Other | lineage4.1.2.1 | None | SRR23862103 | Sensitive | lineage2.2.1 | None | SRR24710029 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239501 | MDR-TB | lineage4.3.3 | None | SRR29539827 | MDR-TB | lineage2.2.1 | None | SRR28240206 | Sensitive | lineage4.1 | None | SRR24709921 | MDR-TB | lineage4.3.3 | None | SRR24710217 | MDR-TB | lineage2.2.1 | None | ERR4797070 | Pre-XDR-TB | lineage2.2.1 | in | SRR24083741 | Sensitive | lineage2.2.1 | None | ERR11488790 | MDR-TB | lineage3 | None | SRR23862081 | Sensitive | lineage4.3.3 | None | SRR24083592 | Sensitive | lineage1.1.1.1 | None | DRR473900 | Sensitive | lineage4.9 | None | SRR23080318 | Sensitive | lineage4.9 | None | SRR24083740 | Sensitive | lineage2.1 | None | SRR28646090 | XDR-TB | lineage4.2.1 | None | SRR28514690 | HR-TB | lineage4.1.1.1 | None | SRR28498597 | Pre-XDR-TB | lineage4.2.1 | None | SRR28389852 | Other | lineage2.2.1.1;lineage4.1.1 | None | SRR25666640 | Sensitive | lineage4.1.2.1 | None | SRR28239990 | Sensitive | lineage4.3.3 | None | SRR24083646 | Sensitive | lineage2.2.1 | None | SRR24709998 | MDR-TB | lineage2.2.1 | None | SRR24709940 | HR-TB | lineage2.2.1 | None | SRR25666600 | Sensitive | lineage4.1.2.1 | None | SRR28514704 | Sensitive | lineage4.1.2.1 | None | SRR24466773 | Sensitive | lineage4.1.2.1 | None | SRR24673568 | Sensitive | lineage4.8 | None | ERR11488818 | MDR-TB | lineage2.2.1 | None | SRR28498662 | Other | lineage2.2.1 | None | SRR28239611 | MDR-TB | lineage2.2.1 | None | SRR24083704 | Sensitive | lineage2.2.1 | None | SRR25666659 | Sensitive | lineage4.1.2.1 | None | SRR28239884 | Other | lineage4.8 | None | SRR28389901 | HR-TB | lineage4.1.1 | None | SRR24083677 | Sensitive | lineage1.1.1.1 | None | SRR23861777 | Sensitive | lineage4.8 | None | SRR24083603 | Sensitive | lineage1.1.1.1 | None | SRR28646112 | MDR-TB | lineage4.8 | None | SRR16087875 | Sensitive | lineage4.3.3 | None | SRR24083746 | Sensitive | lineage1.1.1.1 | None | ERR11067504 | MDR-TB | lineage4.8 | None | SRR25666658 | Sensitive | lineage4.1.2.1 | None | SRR22251918 | Sensitive | lineage4.1.2.1 | None | SRR24083702 | Sensitive | lineage2.2.1 | None | ERR10969138 | Sensitive | lineage2.2.1 | None | SRR24466806 | Sensitive | lineage4.8 | None | SRR24083619 | Sensitive | lineage2.2.1 | None | SRR28389899 | Sensitive | lineage4.1.1.3 | None | SRR28514697 | Sensitive | lineage1.2.1.2.1 | None | SRR23861972 | Sensitive | lineage4.8 | None | SRR28514700 | HR-TB | lineage4.1.1.3 | None | SRR28514694 | Other | lineage4.1.1.1 | None | SRR24083651 | Sensitive | lineage2.2.1 | None | SRR24673529 | Other | lineage4.8 | None | SRR23862077 | Other | lineage4.8 | None | SRR24083609 | Sensitive | lineage2.2.1 | None | SRR25666604 | Sensitive | lineage4.1.2.1 | None | SRR24710279 | Pre-XDR-TB | lineage2.2.1 | None | SRR24083648 | Sensitive | lineage2.2.2 | None | SRR23862107 | Sensitive | lineage4.8 | None | SRR25666651 | Sensitive | lineage4.1.2.1 | None | SRR24083726 | Sensitive | lineage2.2.1 | None | SRR24083716 | Sensitive | lineage1.1.1 | None | SRR27450353 | Sensitive | lineage1.2.1.2.1 | None | SRR24255930 | Sensitive | lineage4.2.1.1 | None | SRR28240194 | Sensitive | lineage4.3.3 | None | SRR23861829 | MDR-TB | lineage2.2.1 | None | SRR23861805 | Sensitive | lineage4.3.3 | None | SRR23861869 | Sensitive | lineage2.2.1 | None | SRR23861854 | Other | lineage4.8 | None | SRR24709920 | MDR-TB | lineage2.2.1 | None | SRR24710222 | Sensitive | lineage4.1.2.1 | None | SRR29539666 | MDR-TB | lineage4.3.3 | None | SRR24083690 | Sensitive | lineage4.3.3 | None | SRR29539337 | Sensitive | lineage2.2.1 | None | SRR24083647 | Sensitive | lineage1.1.1.1 | None | SRR24710053 | Other | lineage2.2.1 | None | SRR24083599 | Sensitive | lineage2.2.1 | None | SRR24083666 | Sensitive | lineage2.2.1 | None | SRR24083606 | Other | lineage2.2.1 | None | SRR23861824 | MDR-TB | lineage2.2.1 | None | SRR24083627 | Sensitive | lineage2.2.2 | None | SRR24083688 | Sensitive | lineage1.1.1.1 | None | SRR23862006 | Sensitive | lineage4.2.1.1 | None | SRR29538888 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR24083718 | Sensitive | lineage2.2.1 | None | SRR24083695 | Sensitive | lineage2.2.1 | None | SRR24710244 | MDR-TB | lineage2.2.1 | None | SRR24083728 | Sensitive | lineage2.2.1 | None | SRR28239974 | Other | lineage4.3.3 | None | SRR25827636 | Other | lineage3.1.3 | None | SRR16088026 | Sensitive | lineage4.8 | None | ERR11067794 | Sensitive | lineage4.4.1.1 | None | SRR28239991 | Pre-XDR-TB | lineage2.2.1 | None | SRR24083611 | Sensitive | lineage2.2.1 | None | SRR24083637 | Sensitive | lineage1.1.1.1 | None | SRR23861939 | Sensitive | lineage4.3.3 | None | SRR28239620 | Sensitive | lineage2.2.1 | None | ERR11050882 | Sensitive | lineage4.7 | None | ERR11068015 | Sensitive | lineage3 | None | SRR16088208 | HR-TB | lineage2.2.1 | None | SRR24710014 | Pre-XDR-TB | lineage2.2.1 | None | SRR28859648 | Sensitive | lineage4.4.1.1 | None | SRR24710038 | MDR-TB | lineage2.2.1 | None | SRR25524708 | Sensitive | lineage4.9 | None | SRR24083739 | Sensitive | lineage2.2.1 | None | SRR23862051 | Sensitive | lineage4.3.3 | None | SRR23861926 | Sensitive | lineage4.3.3 | None | SRR24709941 | Sensitive | lineage2.2.1 | None | SRR24710100 | MDR-TB | lineage2.2.1 | None | SRR28514707 | Sensitive | lineage4.8 | None | SRR28498423 | MDR-TB | lineage2.2.1 | None | SRR28498448 | XDR-TB | lineage4.2.1 | None | SRR28514698 | Sensitive | lineage4.1.2.1 | None | SRR28389884 | Pre-XDR-TB | lineage2.2.1.2;lineage4.1.1.3 | None | SRR28514699 | Sensitive | lineage4.1.2.1 | None | SRR28646110 | MDR-TB | lineage4.8 | None | SRR16088587 | Sensitive | lineage2.2.1 | None | SRR24083724 | Sensitive | lineage2.2.1 | None | SRR23861733 | Sensitive | lineage4.2.1 | None | SRR23861947 | Sensitive | lineage2.2.1 | None | ERR11068082 | Sensitive | lineage4.1.2 | None | SRR28240169 | Sensitive | lineage4.8 | None | SRR24083681 | Sensitive | lineage1.1.1.1 | None | SRR16088126 | XDR-TB | lineage2.2.1 | None | SRR23862044 | Sensitive | lineage2.2.1;lineage4.1.2.1 | None | SRR28514687 | Sensitive | lineage1.2.1.2.1 | None | ERR11488781 | MDR-TB | lineage2.2.1 | None | SRR25666615 | Sensitive | lineage4.1.2.1 | None | SRR24083620 | Sensitive | lineage2.2.1 | None | SRR28646109 | MDR-TB | lineage4.8 | None | SRR28646063 | RR-TB | lineage4.8 | None | SRR24083687 | Sensitive | lineage2.2.1.1 | None | SRR24083593 | Sensitive | lineage2.2.1 | None | SRR25666614 | Sensitive | lineage4.1.2.1 | None | SRR28514693 | Sensitive | lineage4.1.1.1 | None | SRR23862075 | MDR-TB | lineage2.2.1 | None | SRR24083737 | Sensitive | lineage2.2.1 | None | SRR24083597 | Sensitive | lineage2.2.1 | None | SRR23861946 | Sensitive | lineage3 | None | SRR29538881 | MDR-TB | lineage4.3.3 | None | SRR16088591 | Sensitive | lineage4.1.2.1 | None | SRR24083707 | Sensitive | lineage2.2.1 | None | SRR16088047 | Sensitive | lineage4.8 | None | SRR24710116 | Other | lineage2.2.1 | None |
|---|
