lineage | Count |
---|---|
lineage4.9 | 2 |
La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
lineage2.1;lineage4.9;lineage6.3 | 3 |
lineage2.1 | 1 |
lineage3.1.2.2 | 1 |
lineage4.9;lineage6.3 | 1 |
1 | |
M.canetti;lineage2.1;lineage4.9 | 2 |
lineage2.1;lineage4.9 | 2 |
lineage4.3.2;lineage4.9 | 1 |
La2;lineage4.9;lineage9 | 1 |
La2;lineage4.9 | 1 |
lineage2.2.1 | 1 |
La3;lineage2 | 1 |
La3;lineage2.1;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 24 |
ID | Drug resistance | Lineage | Country iso2 | SRR1196546 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | SRR1196583 | Other | lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
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