lineage | Count |
---|---|
lineage1.1.3 | 4 |
lineage1.1.2 | 8 |
lineage2.2.1 | 58 |
lineage4.1.2 | 1 |
lineage4.1.1.3 | 2 |
lineage4.3.4.2 | 5 |
lineage4.3.4.2.1 | 1 |
lineage4.2.2.2 | 2 |
lineage2.2.1;lineage4.5 | 1 |
lineage2.1 | 5 |
lineage4.1.2.1 | 9 |
lineage4.3.2.1 | 1 |
lineage2.2.2 | 2 |
lineage2.2.1.1 | 2 |
lineage4.3.4.1 | 3 |
lineage4.3.2 | 1 |
lineage1.1.1 | 4 |
lineage1.2.2.2 | 2 |
lineage4.2.2 | 2 |
lineage1.1.1.1;lineage2.2.1 | 1 |
lineage4.3 | 1 |
lineage4.8 | 1 |
lineage4.5 | 1 |
lineage4.7 | 1 |
lineage4.1 | 1 |
lineage2.2.1;lineage4.9 | 1 |
lineage2.2.1.2 | 3 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 124 |
ID | Drug resistance | Lineage | Country iso2 | ERR4821264 | Other | lineage1.1.3 | None | ERR202404 | Sensitive | lineage1.1.2 | None | SRR25207396 | RR-TB | lineage2.2.1 | None | SRR6280166 | Sensitive | lineage2.2.1 | cn | SRR8217904 | HR-TB | lineage4.1.2 | None | ERR502916 | Sensitive | lineage2.2.1 | None | SRR11662160 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260159 | MDR-TB | lineage4.1.1.3 | None | SRR25515414 | Sensitive | lineage2.2.1 | None | SRR22424809 | Sensitive | lineage1.1.2 | None | SRR21747048 | MDR-TB | lineage2.2.1 | None | ERR2707004 | MDR-TB | lineage4.3.4.2 | cd | ERR036212 | Sensitive | lineage4.3.4.2.1 | mw | SRR18914243 | HR-TB | lineage2.2.1 | None | ERR13285599 | Sensitive | lineage4.2.2.2 | None | SRR26399389 | Sensitive | lineage2.2.1 | None | ERR4800599 | XDR-TB | lineage2.2.1 | in | SRR29385325 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR29539532 | Pre-XDR-TB | lineage2.2.1 | None | SRR671819 | Pre-XDR-TB | lineage2.2.1 | cn | SRR11662677 | Pre-XDR-TB | lineage2.1 | None | ERR13260565 | MDR-TB | lineage4.1.2.1 | None | SRR11662162 | Pre-XDR-TB | lineage2.1 | None | SRR6824406 | MDR-TB | lineage2.2.1 | cn | SRR6982335 | Sensitive | lineage4.3.2.1 | None | SRR6484858 | Sensitive | lineage2.2.1 | None | ERR5865750 | MDR-TB | lineage2.2.1 | None | SRR12420349 | Other | lineage2.2.2 | None | ERR5865751 | MDR-TB | lineage2.2.1 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | SRR14519940 | MDR-TB | lineage2.2.1.1 | None | SRR26399497 | HR-TB | lineage2.2.1 | None | ERR4821341 | Other | lineage4.3.4.1 | None | SRR29017332 | MDR-TB | lineage4.3.2 | None | SRR26937079 | MDR-TB | lineage2.2.1 | None | SRR29017312 | HR-TB | lineage2.2.1 | None | SRR11662528 | MDR-TB | lineage2.1 | None | SRR10808769 | HR-TB | lineage4.1.2.1 | None | SRR18593210 | MDR-TB | lineage1.1.2 | None | SRR21887719 | MDR-TB | lineage2.2.1 | None | ERR2446531 | Sensitive | lineage2.2.1 | nl | ERR4820815 | Sensitive | lineage1.1.3 | gb | ERR4828634 | HR-TB | lineage2.2.1 | vn | ERR234134 | HR-TB | lineage2.2.1 | cn | ERR12328178 | Sensitive | lineage1.1.1 | None | SRR16087918 | MDR-TB | lineage2.2.1 | None | ERR4796592 | Sensitive | lineage2.2.1 | in | ERR10225404 | Sensitive | lineage1.2.2.2 | None | SRR671744 | MDR-TB | lineage2.2.1 | cn | ERR551508 | Sensitive | lineage4.3.4.2 | de | SRR20969777 | MDR-TB | lineage4.2.2 | None | SRR20969948 | Sensitive | lineage2.2.1 | None | SRR6480393 | HR-TB | lineage4.1.2.1 | None | SRR15723142 | HR-TB | lineage2.2.1 | None | ERR1193820 | Sensitive | lineage4.3.4.2 | de | SRR22251682 | Sensitive | lineage1.1.1 | None | ERR4831827 | MDR-TB | lineage1.1.1.1;lineage2.2.1 | vn | ERR13265139 | MDR-TB | lineage2.2.1 | None | SRR29772500 | MDR-TB | lineage1.1.2 | None | ERR4553408 | MDR-TB | lineage4.3 | None | ERR4828908 | MDR-TB | lineage4.8 | None | ERR2515373 | MDR-TB | lineage2.2.1 | za | SRR29230773 | MDR-TB | lineage4.3.4.2 | None | ERR752067 | Sensitive | lineage1.1.1 | th | SRR11662223 | MDR-TB | lineage2.1 | None | SRR6930918 | MDR-TB | lineage2.2.1 | None | ERR4822200 | Other | lineage4.3.4.1 | gb | ERR4800397 | Sensitive | lineage2.2.1 | in | ERR11466521 | Sensitive | lineage4.1.2.1 | None | ERR8975151 | Sensitive | lineage4.1.1.3 | None | ERR4457848 | Sensitive | lineage4.1.2.1 | None | SRR24710119 | MDR-TB | lineage2.2.1 | None | ERR2517146 | Sensitive | lineage2.2.1 | nl | ERR13292500 | HR-TB | lineage2.2.1 | None | SRR14782379 | MDR-TB | lineage2.2.1 | None | ERR3275253 | Sensitive | lineage2.2.1 | nl | SRR10520175 | Sensitive | lineage1.1.1 | None | ERR8975885 | MDR-TB | lineage2.2.1.1 | None | ERR2307458 | MDR-TB | lineage2.2.1 | None | ERR4830024 | Sensitive | lineage4.5 | None | SRR24256271 | MDR-TB | lineage2.2.1 | None | SRR21733234 | Sensitive | lineage2.2.1 | None | ERR6359079 | MDR-TB | lineage4.7 | None | ERR718478 | Sensitive | lineage2.2.1 | th | ERR4818371 | Sensitive | lineage4.3.4.1 | None | SRR14782004 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786789 | Sensitive | lineage4.1 | None | SRR15723064 | HR-TB | lineage2.2.1 | None | SRR11348183 | Sensitive | lineage4.1.2.1 | None | SRR14519818 | Sensitive | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR027465 | MDR-TB | lineage2.2.1;lineage4.9 | None | ERR4796348 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR30182311 | Other | lineage1.2.2.2 | None | SRR14165131 | Sensitive | lineage4.3.4.2 | None | ERR4800628 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13260937 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13261677 | MDR-TB | lineage4.1.2.1 | None | ERR4796561 | MDR-TB | lineage2.2.1 | in | SRR22137376 | Sensitive | lineage1.1.2 | None | SRR11348184 | Sensitive | lineage4.1.2.1 | None | SRR2099959 | HR-TB | lineage1.1.2 | None | ERR13260547 | MDR-TB | lineage4.1.2.1 | None | SRR21279452 | Other | lineage2.2.1 | None | ERR12790848 | MDR-TB | lineage2.2.1 | None | SRR16088400 | MDR-TB | lineage2.2.1 | None | SRR20969452 | MDR-TB | lineage4.2.2 | None | SRR10040527 | MDR-TB | lineage2.2.1 | None | SRR21279378 | Sensitive | lineage2.2.1 | None | ERR4818351 | Other | lineage1.1.3 | None | SRR29772660 | Pre-XDR-TB | lineage2.2.1 | None | SRR26400114 | HR-TB | lineage2.2.1 | None | SRR25515528 | Pre-XDR-TB | lineage2.2.2 | None | SRR12420573 | MDR-TB | lineage2.2.1 | None | ERR270666 | HR-TB | lineage1.1.2 | None | ERR718308 | Sensitive | lineage2.2.1 | th | SRR18213943 | HR-TB | lineage1.1.2 | None | ERR4811239 | RR-TB | lineage2.2.1 | None | SRR10040160 | MDR-TB | lineage2.2.1 | None | SRR11662502 | MDR-TB | lineage2.1 | None | SRR15723246 | Sensitive | lineage2.2.1 | None | SRR21690390 | Sensitive | lineage4.2.2.2 | None | ERR4814843 | Other | lineage1.1.3 | None | SRR6964595 | Other | lineage3 | None |
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