Rv3423c - c.144C>T


Drug resistance types
236 Sensitive 6 RR-TB 38 HR-TB 26 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 38 Other
lineage Counts
lineage Count
lineage1.1.3.1 331
lineage1.1.3.1;lineage3.1.2 1
lineage1.1.3.1;lineage4 3
lineage1;lineage3 1
lineage1.1.3.1;lineage1.2.1.2.1 1
lineage1.1.3.1;lineage2.2.1.2 1
lineage4 1
lineage1.1.3.1;lineage1.2.2.2 1
lineage1.1.2;lineage1.1.3.1 1
lineage1.1.3.1;lineage3 1
lineage1.1.3.1;lineage4.1.3 1
1
spoligotype Counts
spoligotype Count
None 344
Geographic prevalence
Country level data for this variant is available for 50 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR751757 Other lineage1.1.3.1 th
ERR4553530 HR-TB lineage1.1.3.1 None
ERR2515035 Sensitive lineage1.1.3.1 gb
ERR9657192 Sensitive lineage1.1.3.1 None
ERR9899674 Sensitive lineage1.1.3.1 None
SRR12882723 Sensitive lineage1.1.3.1 None
SRR6797710 MDR-TB lineage1.1.3.1 None
SRR11972258 Sensitive lineage1.1.3.1 None
SRR6797400 Sensitive lineage1.1.3.1 None
ERR4818489 Other lineage1.1.3.1 None
SRR6650391 Sensitive lineage1.1.3.1 None
SRR21658640 Other lineage1.1.3.1 None
SRR6797461 Sensitive lineage1.1.3.1 None
SRR4423158 MDR-TB lineage1.1.3.1 None
SRR6797695 HR-TB lineage1.1.3.1 None
ERR4553594 MDR-TB lineage1.1.3.1 None
SRR21685365 Sensitive lineage1.1.3.1 None
SRR7070171 RR-TB lineage1.1.3.1 None
SRR22250145 Sensitive lineage1.1.3.1 None
SRR6797353 Other lineage1.1.3.1 None
SRR6650275 Sensitive lineage1.1.3.1 None
ERR4829357 Sensitive lineage1.1.3.1 None
ERR4553651 Other lineage1.1.3.1 None
SRR6045857 Sensitive lineage1.1.3.1 gb
ERR751842 Sensitive lineage1.1.3.1 th
ERR551865 Sensitive lineage1.1.3.1 cg
SRR6797814 Sensitive lineage1.1.3.1 None
SRR21675446 Sensitive lineage1.1.3.1 None
ERR4818207 Sensitive lineage1.1.3.1 gb
SRR6797820 Sensitive lineage1.1.3.1 None
ERR4816514 HR-TB lineage1.1.3.1 gb
ERR4553548 MDR-TB lineage1.1.3.1 None
SRR11972444 Sensitive lineage1.1.3.1 None
SRR22249879 Sensitive lineage1.1.3.1 None
SRR24222907 HR-TB lineage1.1.3.1 None
SRR27450359 Sensitive lineage1.1.3.1 None
ERR4553505 MDR-TB lineage1.1.3.1 None
ERR752083 Other lineage1.1.3.1 th
SRR19303783 Other lineage1.1.3.1 None
ERR718327 HR-TB lineage1.1.3.1 th
ERR718329 Other lineage1.1.3.1 th
SRR11972313 Sensitive lineage1.1.3.1;lineage3.1.2 None
SRR6797535 Sensitive lineage1.1.3.1 None
SRR21714179 Sensitive lineage1.1.3.1 None
ERR234197 Sensitive lineage1.1.3.1 None
ERR751667 HR-TB lineage1.1.3.1 th
ERR4797810 Sensitive lineage1.1.3.1 in
SRR15506908 Sensitive lineage1.1.3.1 None
SRR6045321 Other lineage1.1.3.1 None
ERR12328199 Sensitive lineage1.1.3.1 None
ERR9032596 Sensitive lineage1.1.3.1 None
SRR6797658 Sensitive lineage1.1.3.1 None
SRR26056431 Other lineage1.1.3.1 None
SRR6797733 Sensitive lineage1.1.3.1 None
ERR4815505 Sensitive lineage1.1.3.1 gb
SRR8649123 Sensitive lineage1.1.3.1 None
SRR22251074 Sensitive lineage1.1.3.1 None
SRR16370569 HR-TB lineage1.1.3.1 None
SRR17856686 Sensitive lineage1.1.3.1 None
SRR6650158 Sensitive lineage1.1.3.1 None
SRR26112554 Sensitive lineage1.1.3.1 None
ERR11067424 Sensitive lineage1.1.3.1 None
ERR11050754 Sensitive lineage1.1.3.1 None
ERR11049155 Sensitive lineage1.1.3.1 None
ERR234217 Sensitive lineage1.1.3.1 None
ERR718382 Sensitive lineage1.1.3.1 th
SRR11972269 Sensitive lineage1.1.3.1;lineage4 None
SRR6797494 Sensitive lineage1.1.3.1 None
SRR19318146 Sensitive lineage1.1.3.1 None
SRR6650201 Other lineage1.1.3.1 None
SRR21732295 HR-TB lineage1.1.3.1 None
ERR4553924 HR-TB lineage1.1.3.1 None
SRR16370267 Other lineage1.1.3.1 None
SRR19315461 HR-TB lineage1.1.3.1 None
ERR4820488 Sensitive lineage1.1.3.1 None
SRR6797495 Sensitive lineage1.1.3.1 None
ERR233376 Sensitive lineage1.1.3.1 np
SRR11972377 Sensitive lineage1.1.3.1 None
SRR12882772 Sensitive lineage1.1.3.1 None
SRR26112355 Sensitive lineage1.1.3.1 None
SRR11662263 MDR-TB lineage1.1.3.1 None
SRR6797828 Sensitive lineage1.1.3.1 None
SRR6650125 Other lineage1.1.3.1 None
SRR6797399 Sensitive lineage1;lineage3 None
ERR718388 Sensitive lineage1.1.3.1 th
SRR7070035 Sensitive lineage1.1.3.1 None
SRR21733371 Other lineage1.1.3.1 None
ERR752072 Other lineage1.1.3.1 th
SRR6650369 Sensitive lineage1.1.3.1 None
SRR21657216 Sensitive lineage1.1.3.1 None
ERR767968 HR-TB lineage1.1.3.1 th
ERR4797220 Sensitive lineage1.1.3.1 in
SRR6797408 Sensitive lineage1.1.3.1 None
SRR11972322 HR-TB lineage1.1.3.1 None
SRR16058451 Sensitive lineage1.1.3.1 None
SRR11972280 HR-TB lineage1.1.3.1 None
SRR6650228 Sensitive lineage1.1.3.1 None
SRR6650215 Sensitive lineage1.1.3.1 None
SRR11972206 Sensitive lineage1.1.3.1 None
SRR6650427 Sensitive lineage1.1.3.1 None
SRR6797647 Sensitive lineage1.1.3.1 None
ERR028325 Sensitive lineage1.1.3.1 None
SRR6797570 Sensitive lineage1.1.3.1 None
SRR6650415 Sensitive lineage1.1.3.1 None
SRR6797528 HR-TB lineage1.1.3.1 None
SRR28044319 Sensitive lineage1.1.3.1;lineage1.2.1.2.1 None
SRR28045969 Sensitive lineage1.1.3.1 None
SRR28409591 Sensitive lineage1.1.3.1 None
SRR28045059 Other lineage1.1.3.1 None
SRR28046212 Sensitive lineage1.1.3.1 None
SRR28045603 Sensitive lineage1.1.3.1 None
SRR28044540 Sensitive lineage1.1.3.1 None
SRR6650119 Sensitive lineage1.1.3.1 None
SRR28045702 Sensitive lineage1.1.3.1 None
ERR2513061 Sensitive lineage1.1.3.1 gb
SRR11972422 MDR-TB lineage1.1.3.1 None
SRR6797827 Sensitive lineage1.1.3.1 None
ERR2512698 Sensitive lineage1.1.3.1 gb
SRR6797667 Sensitive lineage1.1.3.1 None
SRR6797536 Sensitive lineage1.1.3.1 None
SRR6397656 Sensitive lineage1.1.3.1 ca
SRR7069856 Sensitive lineage1.1.3.1 None
ERR1035136 Sensitive lineage1.1.3.1 sa
ERR4828876 Sensitive lineage1.1.3.1 None
SRR6797423 Sensitive lineage1.1.3.1 None
SRR6797522 Sensitive lineage1.1.3.1 None
SRR6797825 Sensitive lineage1.1.3.1 None
ERR11068614 Sensitive lineage1.1.3.1 None
ERR11049682 Sensitive lineage1.1.3.1 None
SRR3724767 Sensitive lineage1.1.3.1 None
SRR25340985 Sensitive lineage1.1.3.1 None
ERR4553509 MDR-TB lineage1.1.3.1 None
SRR6797783 Other lineage1.1.3.1 None
SRR6650259 Sensitive lineage1.1.3.1 None
SRR6797308 Sensitive lineage1.1.3.1 None
ERR4814406 Sensitive lineage1.1.3.1 None
SRR6797348 Sensitive lineage1.1.3.1 None
SRR11972329 MDR-TB lineage1.1.3.1 None
SRR11972391 MDR-TB lineage1.1.3.1 None
SRR11972276 MDR-TB lineage1.1.3.1 None
ERR4818025 Sensitive lineage1.1.3.1 gb
ERR11044616 Sensitive lineage1.1.3.1 None
ERR4553858 RR-TB lineage1.1.3.1 None
ERR11044829 Sensitive lineage1.1.3.1 None
ERR7902742 Sensitive lineage1.1.3.1 None
SRR12199385 Sensitive lineage1.1.3.1 None
ERR4814800 Sensitive lineage1.1.3.1 gb
SRR21732251 Sensitive lineage1.1.3.1 None
SRR16058098 Sensitive lineage1.1.3.1 None
SRR6797401 Other lineage1.1.3.1 None
SRR16370604 HR-TB lineage1.1.3.1 None
SRR6650126 MDR-TB lineage1.1.3.1 None
SRR6797810 Sensitive lineage1.1.3.1;lineage2.2.1.2 None
SRR6797396 HR-TB lineage1.1.3.1 None
SRR22249637 Sensitive lineage1.1.3.1 None
SRR6797551 Sensitive lineage1.1.3.1 None
SRR6797547 Sensitive lineage1.1.3.1 None
ERR4817100 Sensitive lineage1.1.3.1 gb
ERR4815048 Sensitive lineage1.1.3.1 None
SRR6797467 Sensitive lineage1.1.3.1 None
SRR7069102 Sensitive lineage1.1.3.1 None
SRR6650332 HR-TB lineage1.1.3.1 None
ERR9715408 Sensitive lineage1.1.3.1 None
ERR9125880 Sensitive lineage1.1.3.1 None
ERR751703 Sensitive lineage1.1.3.1 th
ERR072086 Sensitive lineage1.1.3.1 None
SRR6650370 Sensitive lineage1.1.3.1 None
SRR7069855 Sensitive lineage1.1.3.1 None
SRR21733206 Sensitive lineage1.1.3.1 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR21709862 HR-TB lineage1.1.3.1 None
SRR6650360 Sensitive lineage1.1.3.1 None
ERR4822131 HR-TB lineage1.1.3.1 None
SRR6797344 Sensitive lineage1.1.3.1 None
SRR11972257 Sensitive lineage4 None
SRR12882480 Sensitive lineage1.1.3.1 None
SRR26056406 Sensitive lineage1.1.3.1 None
SRR6797466 Sensitive lineage1.1.3.1 None
SRR22249857 Sensitive lineage1.1.3.1 None
SRR6797703 HR-TB lineage1.1.3.1 None
ERR718544 Other lineage1.1.3.1 th
SRR6650337 Sensitive lineage1.1.3.1 None
SRR6797867 Sensitive lineage1.1.3.1 None
ERR3077967 MDR-TB lineage1.1.3.1 None
SRR6797633 Sensitive lineage1.1.3.1 None
SRR12199412 Sensitive lineage1.1.3.1;lineage1.2.2.2 None
SRR6797581 Sensitive lineage1.1.3.1 None
SRR6650212 Other lineage1.1.3.1 None
SRR21732098 Sensitive lineage1.1.3.1 None
ERR369704 Other lineage1.1.3.1 None
ERR4797265 Other lineage1.1.3.1 in
SRR6797611 Sensitive lineage1.1.3.1 None
ERR11068252 Sensitive lineage1.1.3.1 None
ERR11050698 Sensitive lineage1.1.3.1 None
ERR11465433 Sensitive lineage1.1.3.1 None
SRR6797639 Sensitive lineage1.1.3.1 None
ERR4553416 HR-TB lineage1.1.3.1 None
ERR4553820 Other lineage1.1.3.1 None
ERR1213949 Other lineage1.1.3.1 bd
ERR4800350 Sensitive lineage1.1.3.1 in
SRR6797674 Sensitive lineage1.1.3.1 None
SRR21661627 Sensitive lineage1.1.3.1 None
ERR4829793 Sensitive lineage1.1.3.1 it
SRR21713558 Sensitive lineage1.1.3.1 None
ERR4553873 HR-TB lineage1.1.3.1 None
ERR9119136 Sensitive lineage1.1.3.1 None
ERR4814606 Sensitive lineage1.1.3.1 gb
SRR11972213 Sensitive lineage1.1.3.1 None
ERR4553954 HR-TB lineage1.1.3.1 None
ERR11050370 Sensitive lineage1.1.3.1 None
ERR4818558 Sensitive lineage1.1.3.1 gb
SRR16089403 Sensitive lineage1.1.2;lineage1.1.3.1 None
SRR6650299 Other lineage1.1.3.1 None
SRR6650393 Sensitive lineage1.1.3.1 None
ERR9125815 Sensitive lineage1.1.3.1 None
SRR6797460 Other lineage1.1.3.1 None
SRR6797436 Sensitive lineage1.1.3.1 None
ERR752005 Sensitive lineage1.1.3.1 th
SRR6650281 Sensitive lineage1.1.3.1 None
SRR11972226 Sensitive lineage1.1.3.1 None
SRR6650315 Sensitive lineage1.1.3.1 None
SRR21659037 Sensitive lineage1.1.3.1 None
SRR10321151 Sensitive lineage1.1.3.1 None
ERR718270 Sensitive lineage1.1.3.1 th
SRR11972340 Sensitive lineage1.1.3.1 None
SRR6797281 Sensitive lineage1.1.3.1 None
SRR6797606 Sensitive lineage1.1.3.1 None
ERR4553645 MDR-TB lineage1.1.3.1 None
SRR6797445 Sensitive lineage1.1.3.1 None
ERR2513284 Sensitive lineage1.1.3.1 gb
ERR4553766 RR-TB lineage1.1.3.1 None
SRR6797807 Sensitive lineage1.1.3.1 None
SRR19317595 HR-TB lineage1.1.3.1 None
SRR6650179 Sensitive lineage1.1.3.1 None
SRR11972452 MDR-TB lineage1.1.3.1 None
SRR22249460 Sensitive lineage1.1.3.1 None
ERR4553779 HR-TB lineage1.1.3.1 None
SRR27450527 Sensitive lineage1.1.3.1 None
SRR26112798 HR-TB lineage1.1.3.1 None
ERR4797011 Sensitive lineage1.1.3.1;lineage3 in
SRR6797429 Sensitive lineage1.1.3.1 None
ERR7902637 Sensitive lineage1.1.3.1 None
SRR28044904 Sensitive lineage1.1.3.1 None
SRR18289184 Sensitive lineage1.1.3.1 None
SRR28045789 HR-TB lineage1.1.3.1 None
ERR2514405 Sensitive lineage1.1.3.1 gb
SRR18149483 Sensitive lineage1.1.3.1 None
SRR6797813 Sensitive lineage1.1.3.1 None
ERR4799926 Sensitive lineage1.1.3.1 in
SRR26112136 Sensitive lineage1.1.3.1 None
ERR11068456 Sensitive lineage1.1.3.1 None
SRR21714052 HR-TB lineage1.1.3.1 None
SRR6650104 Sensitive lineage1.1.3.1 None
SRR12199435 Sensitive lineage1.1.3.1 None
SRR6650206 HR-TB lineage1.1.3.1 None
SRR6650367 Sensitive lineage1.1.3.1 None
SRR7069749 Sensitive lineage1.1.3.1 None
SRR11972431 Sensitive lineage1.1.3.1 None
SRR6479537 Other lineage1.1.3.1 None
SRR6797549 Sensitive lineage1.1.3.1 None
SRR21732246 Sensitive lineage1.1.3.1 None
ERR12115310 MDR-TB lineage1.1.3.1 None
ERR4815760 Sensitive lineage1.1.3.1 None
SRR14519682 Sensitive lineage1.1.3.1 None
ERR4553490 RR-TB lineage1.1.3.1 None
SRR6797855 Sensitive lineage1.1.3.1 None
ERR7902757 HR-TB lineage1.1.3.1 None
SRR12199446 Other lineage1.1.3.1 None
ERR7902661 Sensitive lineage1.1.3.1 None
ERR551866 Sensitive lineage1.1.3.1 None
ERR4553570 MDR-TB lineage1.1.3.1 None
SRR6797505 Sensitive lineage1.1.3.1 None
SRR21732183 Sensitive lineage1.1.3.1 None
SRR21676522 Sensitive lineage1.1.3.1 None
ERR025883 Sensitive lineage1.1.3.1;lineage4 None
ERR4553648 MDR-TB lineage1.1.3.1 None
SRR11972210 Sensitive lineage1.1.3.1 None
SRR12199402 Sensitive lineage1.1.3.1 None
SRR7070515 Other lineage1.1.3.1 None
ERR4817777 Sensitive lineage1.1.3.1 gb
ERR3132243 Other lineage1.1.3.1 None
SRR21732905 Sensitive lineage1.1.3.1 None
SRR21711119 Other lineage1.1.3.1 None
SRR6797599 Sensitive lineage1.1.3.1 None
SRR6797578 Sensitive lineage1.1.3.1 None
SRR22249909 Other lineage1.1.3.1 None
SRR6797425 Sensitive lineage1.1.3.1 None
ERR2512631 Sensitive lineage1.1.3.1 gb
SRR6797474 MDR-TB lineage1.1.3.1 None
SRR6650245 Sensitive lineage1.1.3.1 None
ERR4553952 RR-TB lineage1.1.3.1 None
SRR6797312 Sensitive lineage1.1.3.1 None
ERR4821432 HR-TB lineage1.1.3.1;lineage4.1.3 None
ERR11049575 HR-TB lineage1.1.3.1 None
SRR27450261 HR-TB lineage1.1.3.1 None
SRR12199414 Sensitive lineage1.1.3.1;lineage4 None
ERR718289 Other lineage1.1.3.1 th
SRR6797585 Sensitive lineage1.1.3.1 None
SRR15465775 MDR-TB lineage1.1.3.1 None
ERR4553910 HR-TB lineage1.1.3.1 None
ERR718527 Other lineage1.1.3.1 th
ERR4820995 HR-TB lineage1.1.3.1 None
SRR6797492 MDR-TB lineage1.1.3.1 None
ERR4553464 MDR-TB lineage1.1.3.1 None
SRR11662667 MDR-TB lineage1.1.3.1 None
SRR26112363 Sensitive lineage1.1.3.1 None
SRR11972334 Sensitive lineage1.1.3.1 None
SRR12882052 Sensitive lineage1.1.3.1 None
SRR26112684 Sensitive lineage1.1.3.1 None
SRR7829242 Sensitive lineage1.1.3.1 None
ERR11050570 Sensitive lineage1.1.3.1 None
SRR6650411 Sensitive lineage1.1.3.1 None
SRR6797854 Sensitive lineage1.1.3.1 None
ERR752237 Other lineage1.1.3.1 th
ERR8025345 Other lineage1.1.3.1 None
ERR2512847 Sensitive lineage1.1.3.1 gb
ERR2514192 Sensitive lineage1.1.3.1 gb
SRR12199440 HR-TB lineage1.1.3.1 None
SRR6650129 Sensitive lineage1.1.3.1 None
SRR6650340 Sensitive lineage1.1.3.1 None
ERR4831043 Sensitive lineage1.1.3.1 np
ERR4816328 Sensitive lineage1.1.3.1 None
SRR11972457 MDR-TB lineage1.1.3.1 None
SRR28044809 HR-TB lineage1.1.3.1 None
SRR6650135 Sensitive lineage1.1.3.1 None
SRR28044951 Sensitive lineage1.1.3.1 None
ERR4553749 RR-TB None
SRR28044542 Sensitive lineage1.1.3.1 None
SRR28045738 Sensitive lineage1.1.3.1 None
SRR28044560 Sensitive lineage1.1.3.1 None
SRR28044658 MDR-TB lineage1.1.3.1 None
SRR28044539 Sensitive lineage1.1.3.1 None
SRR14520021 Sensitive lineage1.1.3.1 None
SRR22251685 Sensitive lineage1.1.3.1 None
ERR4553435 MDR-TB lineage1.1.3.1 None
ERR2124094 Other lineage1.1.3.1 None
ERR752092 HR-TB lineage1.1.3.1 th
SRR6797376 Sensitive lineage1.1.3.1 None
SRR6650383 Sensitive lineage1.1.3.1 None
SRR11972236 Sensitive lineage1.1.3.1 None
SRR6797600 Sensitive lineage1.1.3.1 None
SRR6797803 Sensitive lineage1.1.3.1 None
ERR767977 Other lineage1.1.3.1 th
SRR6650322 Sensitive lineage1.1.3.1 None