Rv3423c - p.Tyr388Asp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
42 MDR-TB
121 Pre-XDR-TB
28 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 86 |
| lineage2.2.1 | 60 |
| lineage2.2.2 | 30 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.8 | 2 |
| lineage4.3.4.1 | 2 |
| lineage1.1.2;lineage2.2.1 | 1 |
| lineage2.2.2;lineage4.1.2.1 | 1 |
| lineage2.2.1.1;lineage3 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.1 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 191 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183124 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13288920 | XDR-TB | lineage4.1.2.1 | None | SRR9971367 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR130168 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101482 | MDR-TB | lineage4.1.2.1 | None | SRR29056094 | Pre-XDR-TB | lineage2.2.2 | None | SRR9971345 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9806812 | MDR-TB | lineage4.1.2.1 | None | SRR29093390 | Pre-XDR-TB | lineage2.2.2 | None | SRR1168963 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488403 | MDR-TB | lineage4.1.2.1 | None | SRR25827503 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261079 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488651 | MDR-TB | lineage4.1.2.1 | None | DRR130075 | MDR-TB | lineage2.2.1 | None | SRR1181171 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971236 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | SRR25827308 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865844 | XDR-TB | lineage2.2.1 | None | SRR19977734 | XDR-TB | lineage2.2.1 | None | ERR11488567 | MDR-TB | lineage4.1.2.1 | None | SRR1181092 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10748195 | Pre-XDR-TB | lineage2.2.2 | None | ERR10610314 | MDR-TB | lineage4.1.2.1 | None | SRR29056276 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827884 | XDR-TB | lineage2.2.1 | None | SRR1165314 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748250 | XDR-TB | lineage4.1.2.1 | None | ERR13258461 | MDR-TB | lineage2.2.1 | None | SRR18714961 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163079 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992907 | XDR-TB | lineage4.1.2.1 | None | ERR13258487 | MDR-TB | lineage2.2.2 | None | ERR7737700 | MDR-TB | lineage4.1.2.1 | None | SRR28393273 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR7911682 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR3132127 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1165246 | MDR-TB | lineage2.2.2 | None | SRR1167296 | MDR-TB | lineage2.2.2 | None | SRR14802059 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02053753 | MDR-TB | lineage4.1.2.1 | za | ERR158588 | Pre-XDR-TB | lineage2.2.1 | ru | SRR1163291 | Pre-XDR-TB | lineage2.2.1 | None | SRR833194 | MDR-TB | lineage4.1.2.1 | None | SRR22175178 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610161 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR21732547 | MDR-TB | lineage4.1.2.1 | None | SRR13232587 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167308 | Pre-XDR-TB | lineage2.2.2 | None | SRR1175494 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180998 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29274212 | Pre-XDR-TB | lineage4.8 | None | ERR10748163 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5153834 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232605 | MDR-TB | lineage2.2.1 | None | SRR1173849 | MDR-TB | lineage2.2.2 | None | ERR9907792 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR9992678 | XDR-TB | lineage4.1.2.1 | None | SRR1175492 | Pre-XDR-TB | lineage2.2.2 | None | ERR9027234 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163447 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR19977735 | XDR-TB | lineage2.2.1 | None | SRR25827632 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1 | None | ERR7737696 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR11662713 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286031 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380178 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610164 | MDR-TB | lineage4.1.2.1 | None | SRR29273834 | Pre-XDR-TB | lineage4.8 | None | ERR11775345 | MDR-TB | lineage4.1.2.1 | None | ERR13288870 | MDR-TB | lineage2.2.2;lineage4.1.2.1 | None | SRR25534347 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093953 | Pre-XDR-TB | lineage2.2.1 | None | SRR19977731 | XDR-TB | lineage2.2.1 | None | ERR8025355 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29273773 | XDR-TB | lineage4.1.2.1 | None | SRR29056355 | MDR-TB | lineage4.1.2.1 | None | ERR13288945 | XDR-TB | lineage4.1.2.1 | None | ERR5987408 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR832981 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13284471 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063895 | MDR-TB | lineage4.1.2.1 | None | SRR19977732 | XDR-TB | lineage2.2.1 | None | SRR12420335 | MDR-TB | lineage2.2.1 | None | SRR10315629 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29056348 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR19977736 | XDR-TB | lineage2.2.1 | None | ERR9027235 | Pre-XDR-TB | lineage2.2.1 | None | ERR551955 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827674 | XDR-TB | lineage2.2.1.1;lineage3 | None | SRR1169108 | Pre-XDR-TB | lineage2.2.1 | None | DRR130074 | MDR-TB | lineage2.2.2 | None | SRR1020014 | Pre-XDR-TB | lineage2.2.2 | None | SRR1020013 | Pre-XDR-TB | lineage2.2.2 | None | SRR21576670 | MDR-TB | lineage2.2.1 | None | ERR9992645 | XDR-TB | lineage4.1.2.1 | None | SRR10315618 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1180276 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7898224 | Pre-XDR-TB | lineage4.1.2.1 | in | SRR1175524 | Pre-XDR-TB | lineage2.2.2 | None | SRR28351280 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290929 | MDR-TB | lineage2.2.1 | None | SRR29093234 | Pre-XDR-TB | lineage2.2.2 | None | SRR14807549 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710276 | XDR-TB | lineage2.2.1 | None | SRR25827325 | XDR-TB | lineage2.2.1;lineage4.9 | None | ERR5758315 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180181 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1162997 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR551956 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710045 | XDR-TB | lineage2.2.1 | None | SRR11662527 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172239 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1181279 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10315617 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1163309 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9806949 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR16088309 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737652 | MDR-TB | lineage4.1.2.1 | None | SRR29055908 | MDR-TB | lineage4.1.2.1 | None | SRR1180419 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9992674 | XDR-TB | lineage4.1.2.1 | None | ERR9993086 | XDR-TB | lineage4.1.2.1 | None | SRR1173419 | Pre-XDR-TB | lineage2.2.2 | None | SRR19977729 | XDR-TB | lineage2.2.1 | None | ERR4831595 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29055668 | MDR-TB | lineage4.1.2.1 | None | SRR1181062 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR8025566 | Pre-XDR-TB | lineage2.2.2 | None | SRR29055513 | Pre-XDR-TB | lineage2.2.2 | None | SRR10185946 | Pre-XDR-TB | lineage2.1 | None | SRR833075 | MDR-TB | lineage4.1.2.1 | None | SRR6982216 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488762 | MDR-TB | lineage4.1.2.1 | None | ERR8665762 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993017 | XDR-TB | lineage4.1.2.1 | None | SRR1173850 | MDR-TB | lineage2.2.2 | None | ERR11043789 | MDR-TB | lineage4.2.1.1 | None | ERR9806802 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8665763 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169102 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1173808 | Pre-XDR-TB | lineage2.2.2 | None | SRR833128 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR26331632 | MDR-TB | lineage4.1.2.1 | None | SRR833038 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR19977730 | XDR-TB | lineage2.2.1 | None | ERR12916925 | XDR-TB | lineage2.2.1 | None | ERR11773716 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1163073 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10315628 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR833131 | MDR-TB | lineage4.1.2.1 | None | ERR9993244 | XDR-TB | lineage2.2.2 | None | SRR19977733 | XDR-TB | lineage2.2.1 | None | SRR9971281 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMEA2534314 | Pre-XDR-TB | lineage2.2.1 | ru | SRR2101574 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29093944 | Pre-XDR-TB | lineage2.2.1 | None | ERR1394279 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29055547 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181284 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR14802031 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807556 | Pre-XDR-TB | lineage2.2.1 | None | ERR551957 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175523 | Pre-XDR-TB | lineage2.2.2 | None | SRR25206953 | XDR-TB | lineage2.2.1 | None | ERR5865845 | XDR-TB | lineage2.2.1 | None | ERR8025763 | Pre-XDR-TB | lineage2.2.2 | None | SRR833032 | MDR-TB | lineage4.1.2.1 | None | SRR9971071 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8369848 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056328 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172352 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971183 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13232585 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992692 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29772444 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773741 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7653609 | Pre-XDR-TB | lineage2.2.1 | None | ERR7362007 | Pre-XDR-TB | lineage2.2.2 | None | ERR9907787 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR9806800 | MDR-TB | lineage4.1.2.1 | None | ERR13290875 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6207282 | MDR-TB | lineage4.1.2.1 | None | SRR1172313 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6896411 | MDR-TB | lineage4.1.2.1 | None | SRR6896523 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10748222 | MDR-TB | lineage4.1.2.1 | None | ERR9806894 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6896197 | MDR-TB | lineage4.1.2.1 | None |
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