Rv3457c - c.-92C>G
Drug resistance types
165 Sensitive
3 RR-TB
21 HR-TB
35 MDR-TB
25 Pre-XDR-TB
1 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.2 | 7 |
| lineage2.2.2 | 2 |
| lineage4.9 | 4 |
| lineage3.1.1 | 13 |
| lineage3 | 16 |
| lineage1.2.1.2.1 | 5 |
| lineage1.1.3.1 | 2 |
| lineage4.4.2 | 5 |
| lineage4.3.3 | 10 |
| La1.8.1 | 9 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1 | 58 |
| lineage4.8 | 57 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.1 | 2 |
| La2 | 1 |
| lineage2.2.1.1 | 7 |
| lineage4.1.2.1 | 14 |
| lineage4.3.4.2 | 8 |
| lineage2.1 | 1 |
| lineage4.7 | 3 |
| lineage4.6.2.2 | 7 |
| lineage4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage1.1.2 | 2 |
| lineage1.2.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.9.1 | 3 |
| lineage6.2.3 | 2 |
| lineage4.1.2 | 3 |
| lineage4.2.2.2 | 5 |
| lineage4.1.1 | 8 |
| lineage4.5 | 1 |
| lineage4.8;lineage2.2.1 | 1 |
| La1.7.1 | 1 |
| La1.2 | 3 |
| lineage4.2.1 | 2 |
| lineage6.2.2 | 1 |
| La1.8.2 | 1 |
| lineage4.3.3;lineage4.2.1 | 1 |
| lineage4.1 | 2 |
| lineage4.3 | 1 |
| lineage5.1.1;lineage4.8 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage6.1.1;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 287 |
Geographic prevalence
Country level data for this variant is available for 69 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12882100 | Sensitive | lineage1.2.1.2 | None | SRR1175358 | Pre-XDR-TB | lineage2.2.2 | None | SRR11823427 | Sensitive | lineage4.9 | None | SRR12882104 | Sensitive | lineage1.2.1.2 | None | SRR12882197 | Sensitive | lineage1.2.1.2 | None | SRR12882111 | Other | lineage1.2.1.2 | None | SRR12882149 | Sensitive | lineage3.1.1 | None | SRR12882333 | Other | lineage3 | None | SRR12882200 | HR-TB | lineage1.2.1.2 | None | SRR12882346 | Sensitive | lineage3.1.1 | None | SRR12882689 | Sensitive | lineage3 | None | SRR12882347 | Sensitive | lineage1.2.1.2.1 | None | SRR12882428 | Sensitive | lineage1.2.1.2.1 | None | SRR12882439 | Sensitive | lineage1.2.1.2 | None | SRR12882440 | Sensitive | lineage1.2.1.2 | None | SRR12882472 | Sensitive | lineage1.1.3.1 | None | SRR12882477 | Sensitive | lineage1.2.1.2.1 | None | SRR12882602 | Sensitive | lineage3.1.1 | None | SRR12882664 | Sensitive | lineage3 | None | SRR14519910 | Sensitive | lineage4.4.2 | None | SRR12882666 | Sensitive | lineage3 | None | SRR13870399 | Pre-XDR-TB | lineage4.3.3 | None | SRR14296342 | Other | La1.8.1 | None | SRR16057971 | Sensitive | lineage4.4.1.1 | None | SRR16058241 | Sensitive | lineage2.2.1 | None | SRR16295732 | Other | lineage2.2.1 | None | SRR16058609 | Sensitive | lineage4.8 | None | SRR16295785 | Other | lineage2.2.1 | None | SRR16295794 | Other | lineage2.2.1 | None | SRR16295805 | Other | lineage2.2.1 | None | SRR16295787 | Other | lineage2.2.1 | None | SRR16370418 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16370682 | Sensitive | lineage2.2.1 | None | SRR16370663 | HR-TB | lineage4.3.4.1 | None | SRR17111227 | Sensitive | La2 | None | SRR1791904 | Other | La1.8.1 | None | SRR1791745 | Other | La1.8.1 | None | SRR1791798 | Other | La1.8.1 | None | SRR18003048 | XDR-TB | lineage2.2.1 | None | SRR1791986 | Other | La1.8.1 | None | SRR1792325 | Other | La1.8.1 | None | SRR1792354 | Other | La1.8.1 | None | SRR21277033 | Sensitive | lineage2.2.1 | None | SRR19267895 | HR-TB | lineage4.3.4.1 | None | SRR19318143 | Sensitive | lineage3 | None | SRR21277017 | Sensitive | lineage2.2.1 | None | SRR18003051 | Other | lineage2.2.1 | None | SRR19233771 | Sensitive | lineage2.2.1 | None | SRR20632810 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277041 | Sensitive | lineage2.2.1 | None | SRR21277121 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277086 | Sensitive | lineage4.4.2 | None | SRR21277067 | Sensitive | lineage2.2.1.1 | None | SRR21277278 | Sensitive | lineage4.4.2 | None | SRR21277131 | Sensitive | lineage2.2.1 | None | SRR21277227 | Sensitive | lineage2.2.1 | None | SRR21277344 | HR-TB | lineage4.4.2 | None | SRR21277305 | Sensitive | lineage2.2.1.1 | None | SRR22048383 | Sensitive | lineage1.2.1.2.1 | None | SRR21277589 | Sensitive | lineage2.2.1.1 | None | SRR22048302 | Sensitive | lineage4.1.2.1 | None | SRR21277338 | Sensitive | lineage2.2.1 | None | SRR21277346 | Sensitive | lineage2.2.1.1 | None | SRR21277624 | Sensitive | lineage4.4.2 | None | SRR21277622 | HR-TB | lineage2.2.1 | None | SRR21661642 | HR-TB | lineage4.3.4.2 | None | SRR21675850 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR21709618 | Sensitive | lineage2.1 | None | SRR24112526 | RR-TB | lineage2.2.2 | None | SRR22048358 | MDR-TB | lineage4.7 | None | ERR11081881 | MDR-TB | lineage2.2.1 | None | SRR22164587 | Sensitive | lineage3 | None | SRR22164589 | Sensitive | lineage3 | None | ERR11243575 | MDR-TB | lineage2.2.1 | None | ERR11243561 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243558 | MDR-TB | lineage2.2.1 | None | ERR11243553 | MDR-TB | lineage2.2.1 | None | ERR11243572 | MDR-TB | lineage4.8 | None | ERR11243600 | Sensitive | lineage4.3.3 | None | ERR11243581 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243583 | MDR-TB | lineage4.3.3 | None | ERR11243584 | MDR-TB | lineage4.3.3 | None | SRR23691363 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243611 | Sensitive | lineage4.1.2.1 | None | ERR1679650 | Sensitive | lineage4.6.2.2 | ng | ERR1577244 | Sensitive | lineage2.2.1 | None | ERR1577246 | Sensitive | lineage2.2.1 | None | ERR1577247 | Sensitive | lineage2.2.1 | None | ERR1577251 | Sensitive | lineage2.2.1 | None | ERR4814297 | Sensitive | lineage3 | gb | ERR4814425 | Sensitive | lineage4.8 | gb | SRR3391833 | HR-TB | lineage4.8 | None | ERR4817325 | Sensitive | lineage4.1.2.1 | gb | ERR2229529 | Sensitive | lineage4.8 | None | ERR2228971 | Sensitive | lineage4.8 | dk | ERR2229139 | Sensitive | lineage4.8 | None | ERR2229095 | Sensitive | lineage4.8 | None | ERR2229167 | Sensitive | lineage4.8 | None | ERR2229176 | Sensitive | lineage4 | None | ERR2229609 | Sensitive | lineage4.8 | None | ERR2229254 | Sensitive | lineage4.8 | dk | ERR2229249 | Sensitive | lineage4.8 | dk | ERR2229307 | Sensitive | lineage4.8 | None | ERR2229273 | Sensitive | lineage4.8 | dk | ERR2229281 | Sensitive | lineage4.8 | dk | ERR2229319 | Sensitive | lineage4.8 | dk | ERR2229314 | Sensitive | lineage4.8 | None | ERR2229334 | Sensitive | lineage4.8 | dk | ERR2229343 | Sensitive | lineage4.8 | dk | ERR2229329 | Sensitive | lineage4.8 | dk | ERR2229349 | Sensitive | lineage4.8 | dk | ERR2229353 | Sensitive | lineage4.8 | dk | ERR2229342 | Sensitive | lineage4.8 | dk | ERR2229360 | Other | lineage4.8 | None | ERR2229354 | Sensitive | lineage4.8 | dk | ERR2229379 | HR-TB | lineage4.8 | None | ERR2229381 | Sensitive | lineage4.8 | None | ERR2229347 | Sensitive | lineage4.8 | dk | ERR2229374 | Sensitive | lineage4.8 | None | ERR2229370 | Sensitive | lineage4.8 | None | ERR2229394 | Other | lineage4.8 | None | ERR2229380 | Sensitive | lineage4.8 | None | ERR2229378 | Sensitive | lineage4.8 | dk | ERR2229403 | Sensitive | lineage4.8 | None | ERR2229395 | Sensitive | lineage4.8 | None | ERR2229412 | Sensitive | lineage4.8 | dk | ERR2229802 | Sensitive | lineage4.8 | None | ERR2229701 | Sensitive | lineage4.8 | None | ERR2229423 | Sensitive | lineage4.8 | None | ERR2229708 | HR-TB | lineage4.8 | None | ERR2229682 | Sensitive | lineage4.8 | dk | ERR2229699 | HR-TB | lineage4.8 | dk | ERR2229706 | Sensitive | lineage4.8 | dk | ERR2229497 | Sensitive | lineage4.8 | None | SAMEA2533992 | Sensitive | lineage4.1.2.1 | de | ERR2229510 | Sensitive | lineage4.8 | None | ERR2245373 | Sensitive | lineage3.1.1 | no | ERR2245407 | Sensitive | lineage3.1.1 | no | ERR2245372 | Sensitive | lineage3.1.1 | no | ERR2245378 | Other | lineage3.1.1 | no | ERR2245401 | Sensitive | lineage3.1.1 | no | ERR2245404 | Sensitive | lineage3.1.1 | no | ERR2513343 | HR-TB | lineage4.1.2.1 | gb | ERR2245409 | HR-TB | lineage3.1.1 | no | ERR2245413 | Sensitive | lineage3.1.1 | no | ERR2245418 | Sensitive | lineage3.1.1 | no | ERR2503455 | Sensitive | lineage4.8 | fi | ERR2513561 | Sensitive | lineage4.8 | gb | ERR2245408 | Sensitive | lineage3.1.1 | no | ERR2513185 | Sensitive | lineage4.1.1.3 | gb | ERR2512529 | Sensitive | lineage4.1.1.3.1 | gb | ERR2517177 | Sensitive | lineage4.2.2.1 | nl | ERR2513922 | Sensitive | lineage1.1.2 | gb | ERR2514001 | HR-TB | lineage3 | gb | ERR2517414 | Sensitive | lineage2.2.1 | nl | ERR2515660 | Pre-XDR-TB | lineage2.2.1 | za | ERR2517196 | Sensitive | lineage1.2.1.1 | nl | ERR2514602 | Sensitive | lineage3.1.2 | gb | ERR2515967 | Sensitive | lineage4.9.1 | za | ERR2515845 | Sensitive | lineage2.2.1 | za | ERR2517266 | Sensitive | lineage4.1.2.1 | nl | SRR5481444 | Sensitive | lineage4.3.4.2 | None | ERR2517500 | Sensitive | lineage6.2.3 | nl | ERR2517563 | Other | lineage4.1.2 | nl | ERR2652993 | MDR-TB | lineage4.7 | None | ERR2517639 | Sensitive | lineage4.2.2.2 | nl | ERR2653050 | Other | lineage4.1.1 | None | ERR2653040 | Other | lineage4.1.1 | None | ERR2653041 | Other | lineage4.1.1 | None | ERR2653057 | Sensitive | lineage4.1.1 | None | ERR2653093 | Pre-XDR-TB | lineage4.1.1 | None | ERR3275921 | Sensitive | lineage4.1.2.1 | nl | ERR2653114 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2653124 | Pre-XDR-TB | lineage4.1.1 | None | ERR2653213 | Pre-XDR-TB | lineage4.1.1 | None | ERR2653104 | MDR-TB | lineage4.1.1 | None | ERR2446199 | Other | lineage4.1.2 | nl | SRR6046288 | Other | lineage3 | gb | SRR6045932 | MDR-TB | lineage4.2.2.2 | None | ERR4827927 | MDR-TB | lineage2.2.1 | None | ERR4827463 | RR-TB | lineage4.1.2.1 | None | SRR5818698 | Sensitive | lineage1.1.2 | dj | ERR551787 | HR-TB | lineage4.1.2.1 | de | ERR2446369 | Sensitive | lineage6.2.3 | nl | ERR4829688 | Sensitive | lineage4.8 | it | ERR4829996 | MDR-TB | lineage4.6.2.2 | None | ERR4830870 | MDR-TB | lineage4.4.1.1 | sz | SRR6832393 | HR-TB | lineage2.2.1 | None | SRR6353871 | MDR-TB | lineage2.2.1 | None | SRR6485029 | Sensitive | lineage4.5 | None | SRR6485112 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485125 | Sensitive | lineage4.8 | None | SRR6831785 | MDR-TB | lineage2.2.1 | None | ERR552860 | Sensitive | lineage4.1.2.1 | de | SRR6785465 | Sensitive | lineage4.8;lineage2.2.1 | None | SRR7851343 | Other | La1.7.1 | None | SRR6855819 | Sensitive | lineage2.2.1 | None | SRR6855838 | Sensitive | lineage4.9.1 | None | ERR3132226 | HR-TB | lineage1.1.3.1 | None | ERR4831877 | HR-TB | lineage2.2.1 | vn | ERR2446422 | Sensitive | lineage1.2.1.1 | nl | ERR2446485 | Sensitive | lineage2.2.1 | nl | SRR9613540 | Sensitive | lineage4.6.2.2 | None | SRR7851369 | Other | La1.2 | None | SRR8073677 | Other | La1.8.1 | None | SRR9613539 | MDR-TB | lineage4.3.3 | None | SRR9613542 | MDR-TB | lineage4.1.2 | None | SRR7851367 | Other | La1.2 | None | ERR551867 | Sensitive | lineage4.6.2.2 | de | ERR552995 | Sensitive | lineage4.2.1 | de | ERR553000 | MDR-TB | lineage6.2.2 | None | SRR7517834 | MDR-TB | lineage4.3.3 | pe | SRR9613548 | Other | lineage4.1.2.1 | None | SRR7851315 | Other | La1.8.2 | None | SRR9166036 | Sensitive | lineage4.9 | None | SRR7535078 | Other | lineage3 | None | DRR290121 | Sensitive | lineage2.2.1 | None | SRR7851325 | Other | La1.2 | None | ERR10867788 | MDR-TB | lineage4.3.3 | None | ERR10704860 | Sensitive | lineage4.9 | None | ERR10867699 | MDR-TB | lineage2.2.1 | None | ERR10868185 | Pre-XDR-TB | lineage2.2.1 | None | ERR10869423 | Pre-XDR-TB | lineage2.2.1 | None | ERR10868477 | MDR-TB | lineage2.2.1 | None | ERR10877856 | MDR-TB | lineage2.2.1 | None | ERR10873678 | MDR-TB | lineage2.2.1 | None | ERR10877861 | MDR-TB | lineage2.2.1 | None | ERR10877869 | MDR-TB | lineage2.2.1 | None | ERR10877882 | MDR-TB | lineage4.3.3;lineage4.2.1 | None | ERR10877874 | Pre-XDR-TB | lineage2.2.1 | None | ERR10877879 | MDR-TB | lineage2.2.1 | None | ERR10877872 | MDR-TB | lineage2.2.1 | None | ERR10877890 | Pre-XDR-TB | lineage2.2.1 | None | ERR1367610 | Sensitive | lineage4.1 | None | ERR1193730 | HR-TB | lineage4.3 | ma | ERR4195647 | Other | lineage4.3.4.2 | None | ERR3324341 | Sensitive | lineage5.1.1;lineage4.8 | None | ERR3468589 | Other | La1.8.1 | None | ERR3470644 | Sensitive | lineage3 | None | ERR4195567 | Sensitive | lineage4.3.3 | None | ERR3324344 | Sensitive | lineage4.6.2.2 | None | ERR3324361 | Sensitive | lineage1.1.1 | None | ERR387063 | HR-TB | lineage3 | None | ERR4195336 | Sensitive | lineage4.8 | None | ERR5864562 | MDR-TB | lineage2.2.1 | None | ERR4195756 | Sensitive | lineage4.1.2.1 | None | ERR4195819 | Sensitive | lineage4.3.4.2 | None | ERR440680 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4423615 | Pre-XDR-TB | lineage4.6.2.2 | None | ERR4423724 | RR-TB | lineage3 | None | ERR4798295 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR5864867 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865082 | MDR-TB | lineage4.8 | None | ERR6358871 | MDR-TB | lineage4.6.1.2 | None | ERR5866472 | MDR-TB | lineage2.2.1 | None | ERR6336728 | Sensitive | lineage1.2.1.2.1 | None | ERR9121312 | Sensitive | lineage4.1.2.1 | None | ERR6358935 | MDR-TB | lineage4.6.1.2 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR6397194 | Sensitive | lineage4.2.2.2 | None | ERR7801290 | Sensitive | lineage4.9.1 | None | ERR7801304 | Sensitive | lineage4.3.4.2.1 | None | ERR8773847 | Sensitive | lineage4.8 | None | ERR7801165 | Sensitive | lineage4.2.2.2 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | ERR8773690 | HR-TB | lineage4.2.1 | None | ERR8773930 | HR-TB | lineage4.8 | None | ERR8774232 | Pre-XDR-TB | lineage4.6.2.2 | None | ERR9786150 | Sensitive | lineage4.3.4.2 | None | ERR9121513 | Sensitive | lineage4.8 | None | ERR9121624 | Sensitive | lineage4.3.3 | None | ERR9125077 | Sensitive | lineage4.8 | None | ERR9125606 | Sensitive | lineage4.4.1.1 | None | ERR9786175 | Sensitive | lineage4.3.3 | None | ERR9121798 | Other | lineage4.3.4.2 | None | ERR9125909 | Sensitive | lineage2.2.1 | None | ERR9786177 | Sensitive | lineage4.1.2.1 | None | ERR9786249 | Sensitive | lineage6.1.1;lineage4.1.2.1 | None | ERR9896102 | Sensitive | lineage3 | None | ERR9786471 | Sensitive | lineage4.3.4.2 | None | ERR9786821 | Sensitive | lineage4.7 | None | ERR9896098 | Other | lineage4.8 | None | ERR9786400 | Sensitive | lineage4.1 | None | ERR9872281 | Sensitive | lineage4.9 | None | ERR990551 | Sensitive | lineage3 | None | SRR10315584 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR10809121 | Sensitive | lineage4.8 | None |
|---|
