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SRA data
Rv3596c
- c.1374C>T
Drug resistance types
4 Sensitive
0 RR-TB
1 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
5
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
lineage4.6.2.2
2
La2;lineage2.2
1
La3;lineage4.9
1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
1
La2;lineage4.9
1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
14
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR3283018
HR-TB
lineage4.9
None
ERR3283024
Other
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
None
ERR3283032
Other
lineage4.9
None
ERR3283042
Other
lineage4.9
None
ERR3797043
Sensitive
lineage4.9
None
ERR3797044
Other
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
None
ERR3801503
Sensitive
lineage4.6.2.2
None
ERR9786711
Sensitive
lineage4.6.2.2
None
Showing 1 to 10 of 14 entries
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