TB-Profiler
Home
Upload
SRA data
Rv3596c
- c.408G>A
Drug resistance types
11 Sensitive
0 RR-TB
3 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage1.2.2.2
15
lineage2.2.1
3
2
lineage4.9
2
La3;lineage4.9
1
lineage1.1.2;lineage1.2.2.2
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
M.canetti;lineage4.2;lineage4.9
1
La1.7;M.canetti;lineage4.9
1
Showing 1 to 9 of 9 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
27
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR13265304
Sensitive
lineage1.2.2.2
None
ERR13265890
Other
lineage1.2.2.2
None
ERR13265957
Sensitive
lineage1.2.2.2
None
ERR230093
Sensitive
lineage1.2.2.2
None
ERR234659
Other
None
ERR2514692
Other
None
ERR3335730
HR-TB
lineage1.2.2.2
pk
ERR3335746
Other
lineage1.2.2.2
pk
ERR4797201
Other
lineage1.2.2.2
None
Showing 1 to 10 of 27 entries
Previous
1
2
3
Next