Rv3601c - c.-543C>G
Drug resistance types
114 Sensitive
0 RR-TB
9 HR-TB
199 MDR-TB
23 Pre-XDR-TB
1 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 344 |
| lineage4.3.3;lineage4.9 | 3 |
| lineage4.1.2.1;lineage4.3.3 | 1 |
| lineage4.3.3;lineage4.3.4.1 | 2 |
| lineage4.3.2;lineage4.3.3 | 1 |
| lineage4.3.3;lineage4.8 | 3 |
| lineage4.1.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 355 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28858396 | HR-TB | lineage4.3.3 | None | ERR4813536 | MDR-TB | lineage4.3.3 | None | SRR29440906 | HR-TB | lineage4.3.3 | None | ERR775338 | MDR-TB | lineage4.3.3 | pe | ERR6866277 | MDR-TB | lineage4.3.3 | None | ERR4813073 | MDR-TB | lineage4.3.3 | pe | ERR3287634 | MDR-TB | lineage4.3.3 | None | SRR17234904 | MDR-TB | lineage4.3.3 | None | ERR2184485 | Other | lineage4.3.3 | pe | SRR20958128 | Sensitive | lineage4.3.3;lineage4.9 | None | ERR4812950 | MDR-TB | lineage4.3.3 | pe | ERR13260682 | MDR-TB | lineage4.3.3 | None | ERR4813526 | Sensitive | lineage4.3.3 | None | ERR4813563 | MDR-TB | lineage4.3.3 | None | ERR4813642 | MDR-TB | lineage4.3.3 | None | SRR20958160 | HR-TB | lineage4.3.3 | None | SRR3732570 | MDR-TB | lineage4.3.3 | None | SRR28393909 | MDR-TB | lineage4.3.3 | None | ERR13260208 | MDR-TB | lineage4.3.3 | None | ERR751509 | MDR-TB | lineage4.3.3 | pe | ERR3132135 | Other | lineage4.3.3 | None | ERR3132174 | MDR-TB | lineage4.3.3 | None | SRR29053398 | Sensitive | lineage4.3.3 | None | ERR4024938 | Pre-XDR-TB | lineage4.3.3 | None | ERR11080939 | Other | lineage4.3.3 | None | ERR6879034 | MDR-TB | lineage4.3.3 | None | SRR22196585 | Sensitive | lineage4.3.3 | None | SRR29053322 | Sensitive | lineage4.3.3 | None | SRR28393968 | MDR-TB | lineage4.3.3 | None | SRR28393553 | MDR-TB | lineage4.3.3 | None | SRR28394120 | MDR-TB | lineage4.3.3 | None | SRR28393844 | MDR-TB | lineage4.3.3 | None | SRR28393943 | MDR-TB | lineage4.3.3 | None | SRR28393367 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | SRR22461614 | HR-TB | lineage4.3.3 | None | SRR28393314 | MDR-TB | lineage4.3.3 | None | SRR26112787 | Sensitive | lineage4.3.3 | None | ERR6865324 | Pre-XDR-TB | lineage4.3.3 | None | SRR29126351 | Sensitive | lineage4.3.3 | None | SRR21658383 | Sensitive | lineage4.3.3 | None | ERR13260237 | MDR-TB | lineage4.3.3 | None | SRR28393764 | MDR-TB | lineage4.3.3 | None | SRR28393366 | MDR-TB | lineage4.3.3 | None | SRR28393431 | MDR-TB | lineage4.3.3 | None | ERR13261923 | MDR-TB | lineage4.3.3 | None | ERR13261933 | MDR-TB | lineage4.3.3 | None | ERR2516628 | Pre-XDR-TB | lineage4.3.3 | None | ERR4812958 | MDR-TB | lineage4.3.3 | pe | ERR4813342 | MDR-TB | lineage4.3.3 | pe | ERR2510153 | MDR-TB | lineage4.3.3 | pe | SRR20958121 | Sensitive | lineage4.3.3 | None | ERR13260438 | MDR-TB | lineage4.3.3 | None | ERR13260135 | MDR-TB | lineage4.3.3 | None | ERR2184353 | MDR-TB | lineage4.3.3 | None | ERR13260168 | MDR-TB | lineage4.3.3 | None | ERR3287854 | MDR-TB | lineage4.3.3 | pe | SRR10808525 | Other | lineage4.3.3 | None | ERR4025040 | Sensitive | lineage4.3.3 | None | SRR28859589 | Sensitive | lineage4.3.3 | None | ERR6866332 | MDR-TB | lineage4.3.3 | None | ERR13261922 | MDR-TB | lineage4.3.3 | None | ERR13261675 | MDR-TB | lineage4.3.3 | None | ERR1213892 | Other | lineage4.3.3 | pe | SRR20958083 | Sensitive | lineage4.3.3 | None | ERR6879047 | MDR-TB | lineage4.3.3 | None | SRR28394300 | MDR-TB | lineage4.3.3 | None | SRR19241784 | Sensitive | lineage4.3.3 | None | ERR3287872 | MDR-TB | lineage4.3.3 | pe | ERR13260195 | MDR-TB | lineage4.3.3 | None | SRR10129719 | Sensitive | lineage4.3.3 | None | ERR1034679 | MDR-TB | lineage4.3.3 | co | ERR6879035 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None | ERR4812847 | MDR-TB | lineage4.3.3 | None | ERR10561954 | MDR-TB | lineage4.3.3 | None | SRR3724976 | Sensitive | lineage4.3.3 | pe | ERR751436 | MDR-TB | lineage4.3.3 | pe | SRR28393364 | XDR-TB | lineage4.3.3 | None | SRR21728329 | Sensitive | lineage4.3.3 | None | SRR20958118 | Sensitive | lineage4.3.3 | None | SRR29081653 | MDR-TB | lineage4.3.3 | None | ERR13261892 | MDR-TB | lineage4.3.3 | None | ERR1034684 | MDR-TB | lineage4.3.3 | co | SRR20958147 | Sensitive | lineage4.3.3 | None | SRR20958081 | Sensitive | lineage4.3.3 | None | ERR4812995 | MDR-TB | lineage4.3.3 | None | ERR4811913 | MDR-TB | lineage4.3.3 | pe | SRR29748787 | MDR-TB | lineage4.3.3 | None | SRR29126491 | MDR-TB | lineage4.3.3 | None | ERR9029849 | MDR-TB | lineage4.3.3 | None | SRR19241785 | Sensitive | lineage4.3.3 | None | SRR20958095 | Sensitive | lineage4.3.3 | None | ERR3287691 | MDR-TB | lineage4.3.3 | pe | ERR10561925 | Sensitive | lineage4.3.3 | None | ERR4812805 | MDR-TB | lineage4.3.3 | None | ERR4811979 | MDR-TB | lineage4.3.3 | pe | ERR4813007 | MDR-TB | lineage4.3.3 | None | ERR3287610 | Pre-XDR-TB | lineage4.3.3 | None | ERR12117983 | MDR-TB | lineage4.3.3 | None | SRR10129717 | Sensitive | lineage4.3.3 | None | ERR3287786 | MDR-TB | lineage4.3.3 | pe | ERR11068298 | Sensitive | lineage4.3.3 | None | ERR4813604 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813731 | MDR-TB | lineage4.3.3 | None | ERR13260128 | MDR-TB | lineage4.3.3 | None | ERR13261600 | MDR-TB | lineage4.3.3 | None | ERR13261648 | MDR-TB | lineage4.3.3 | None | ERR4812776 | MDR-TB | lineage4.3.3 | pe | ERR3287374 | MDR-TB | lineage4.3.3 | pe | SRR20958122 | Sensitive | lineage4.3.3 | None | ERR4812877 | MDR-TB | lineage4.3.3 | None | ERR1034703 | MDR-TB | lineage4.3.3 | pe | ERR11050697 | Sensitive | lineage4.3.3 | None | SRR21663270 | Sensitive | lineage4.3.3 | None | ERR6865444 | Sensitive | lineage4.3.3 | None | ERR751548 | Pre-XDR-TB | lineage4.3.3 | pe | ERR751571 | MDR-TB | lineage4.3.3 | pe | SRR20958133 | Sensitive | lineage4.3.3 | None | SRR17657953 | MDR-TB | lineage4.3.3 | None | SRR26112564 | Sensitive | lineage4.3.3 | None | SRR28394259 | MDR-TB | lineage4.3.3 | None | ERR6866164 | MDR-TB | lineage4.3.3 | None | ERR4813079 | MDR-TB | lineage4.3.3 | pe | SAMEA5569996 | MDR-TB | lineage4.3.2;lineage4.3.3 | None | ERR6865695 | HR-TB | lineage4.3.3 | None | ERR4812401 | Other | lineage4.3.3 | pe | ERR9029854 | Pre-XDR-TB | lineage4.3.3 | None | ERR775388 | MDR-TB | lineage4.3.3 | pe | ERR6865739 | Sensitive | lineage4.3.3 | None | ERR7911009 | MDR-TB | lineage4.3.3 | None | SRR20958075 | Sensitive | lineage4.3.3 | None | SRR21658576 | Sensitive | lineage4.3.3 | None | ERR4813339 | MDR-TB | lineage4.3.3 | None | SRR19241783 | Sensitive | lineage4.3.3 | None | ERR4813686 | MDR-TB | lineage4.3.3 | None | ERR3287749 | MDR-TB | lineage4.3.3 | pe | SRR23402845 | Sensitive | lineage4.3.3 | None | ERR13260188 | MDR-TB | lineage4.3.3 | None | ERR4813703 | MDR-TB | lineage4.3.3 | None | ERR1034673 | MDR-TB | lineage4.3.3 | co | ERR1034757 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | pe | ERR12118043 | MDR-TB | lineage4.3.3 | None | ERR13261904 | MDR-TB | lineage4.3.3 | None | SRR28393917 | MDR-TB | lineage4.3.3 | None | ERR13260161 | MDR-TB | lineage4.3.3 | None | ERR1034750 | MDR-TB | lineage4.3.3 | pe | ERR13260229 | Pre-XDR-TB | lineage4.3.3 | None | ERR6866002 | Sensitive | lineage4.3.3 | None | ERR7911366 | MDR-TB | lineage4.3.3 | pe | ERR779890 | MDR-TB | lineage4.3.3 | pe | ERR12117934 | Pre-XDR-TB | lineage4.3.3 | None | SRR28393843 | MDR-TB | lineage4.3.3 | None | ERR13261915 | MDR-TB | lineage4.3.3 | None | SRR28393969 | Pre-XDR-TB | lineage4.3.3 | None | SRR28394092 | MDR-TB | lineage4.3.3 | None | SRR28393995 | Pre-XDR-TB | lineage4.3.3 | None | ERR4812806 | MDR-TB | lineage4.3.3 | pe | ERR7911367 | MDR-TB | lineage4.3.3 | pe | ERR13261914 | MDR-TB | lineage4.3.3 | None | ERR13285693 | Sensitive | lineage4.3.3 | None | ERR751365 | MDR-TB | lineage4.3.3 | pe | ERR4195374 | Sensitive | lineage4.3.3 | None | ERR11067200 | Sensitive | lineage4.3.3 | None | SRR21690213 | Sensitive | lineage4.3.3 | None | ERR751629 | MDR-TB | lineage4.3.3 | pe | ERR2184276 | Sensitive | lineage4.3.3 | pe | SRR16370240 | Sensitive | lineage4.3.3 | None | SRR22196590 | Sensitive | lineage4.3.3 | None | ERR7910860 | MDR-TB | lineage4.3.3 | None | SRR28393412 | MDR-TB | lineage4.3.3 | None | ERR12117909 | MDR-TB | lineage4.3.3 | None | SRR23402842 | Sensitive | lineage4.3.3 | None | ERR13260224 | Pre-XDR-TB | lineage4.3.3 | None | SRR26112745 | Sensitive | lineage4.3.3 | None | ERR4830766 | MDR-TB | lineage4.3.3 | ir | SRR28394183 | MDR-TB | lineage4.3.3 | None | SRR20958150 | Sensitive | lineage4.3.3 | None | ERR13260210 | MDR-TB | lineage4.3.3 | None | SRR23402841 | Sensitive | lineage4.3.3 | None | SRR20958103 | Sensitive | lineage4.3.3 | None | ERR751437 | MDR-TB | lineage4.3.3 | pe | ERR12117970 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813053 | MDR-TB | lineage4.3.3 | None | SRR19325552 | Sensitive | lineage4.3.3 | None | SRR10808671 | MDR-TB | lineage4.3.3 | None | ERR4813031 | MDR-TB | lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR3287725 | MDR-TB | lineage4.3.3 | pe | ERR3287766 | MDR-TB | lineage4.3.3 | pe | ERR7910880 | MDR-TB | lineage4.3.3 | pe | ERR4813716 | MDR-TB | lineage4.3.3 | None | ERR4812749 | MDR-TB | lineage4.3.3 | pe | ERR6865602 | MDR-TB | lineage4.3.3 | None | ERR13260212 | MDR-TB | lineage4.3.3 | None | ERR13260193 | MDR-TB | lineage4.3.3 | None | ERR4813623 | MDR-TB | lineage4.3.3 | None | ERR13291781 | Sensitive | lineage4.3.3 | None | SRR10130139 | Sensitive | lineage4.3.3 | None | ERR6866131 | MDR-TB | lineage4.3.3 | None | ERR751543 | MDR-TB | lineage4.3.3 | pe | SRR24799298 | Sensitive | lineage4.3.3 | None | ERR13260702 | MDR-TB | lineage4.3.3 | None | ERR4816569 | Sensitive | lineage4.3.3 | gb | SRR16370378 | Sensitive | lineage4.3.3 | None | ERR3287685 | MDR-TB | lineage4.3.3 | pe | SRR22048557 | Sensitive | lineage4.3.3 | None | ERR13260696 | MDR-TB | lineage4.3.3 | None | SRR20958130 | Sensitive | lineage4.3.3;lineage4.9 | None | SRR10129718 | Sensitive | lineage4.3.3 | None | ERR4178154 | HR-TB | lineage4.3.3 | None | ERR4178184 | Sensitive | lineage4.3.3 | None | SRR22528521 | Sensitive | lineage4.3.3 | None | SRR28393473 | MDR-TB | lineage4.3.3 | None | SRR29053591 | Sensitive | lineage4.3.3 | None | SRR17657960 | Other | lineage4.3.3 | None | SRR20958113 | Sensitive | lineage4.3.3 | None | ERR751416 | MDR-TB | lineage4.3.3 | pe | ERR13260219 | MDR-TB | lineage4.3.3 | None | ERR3287470 | MDR-TB | lineage4.3.3 | pe | ERR3287524 | MDR-TB | lineage4.3.3 | None | ERR3287564 | HR-TB | lineage4.3.3 | None | ERR751595 | MDR-TB | lineage4.3.3 | pe | ERR751609 | MDR-TB | lineage4.3.3 | pe | SRR19241805 | Sensitive | lineage4.3.3 | None | ERR1034798 | MDR-TB | lineage4.3.3 | pe | SRR21675933 | Sensitive | lineage4.3.3 | None | SRR22461610 | MDR-TB | lineage4.3.3 | None | ERR13260279 | Pre-XDR-TB | lineage4.3.3 | None | ERR7910859 | MDR-TB | lineage4.3.3 | None | ERR3287803 | MDR-TB | lineage4.3.3 | None | ERR6879033 | MDR-TB | lineage4.3.3 | None | ERR4813364 | MDR-TB | lineage4.3.3 | pe | ERR6866695 | Sensitive | lineage4.3.3 | None | ERR3287426 | MDR-TB | lineage4.3.3 | pe | ERR13260230 | MDR-TB | lineage4.3.3 | None | ERR13260693 | Pre-XDR-TB | lineage4.3.3 | None | ERR4025035 | MDR-TB | lineage4.3.3 | None | ERR11044850 | Sensitive | lineage4.3.3 | None | SRR28409671 | Sensitive | lineage4.3.3 | None | ERR4812632 | MDR-TB | lineage4.3.3 | None | ERR10561885 | Sensitive | lineage4.3.3 | None | ERR1034748 | MDR-TB | lineage4.3.3 | pe | ERR4813025 | MDR-TB | lineage4.3.3 | None | SRR20958140 | Sensitive | lineage4.3.3 | None | ERR7911012 | MDR-TB | lineage4.3.3 | None | SRR16370362 | Sensitive | lineage4.3.3 | None | ERR9029855 | MDR-TB | lineage4.3.3 | None | SRR19241795 | Sensitive | lineage4.3.3 | None | SRR28393429 | MDR-TB | lineage4.3.3 | None | SRR15508557 | Other | lineage4.3.3 | None | SRR20958089 | Sensitive | lineage4.3.3 | None | SRR20958136 | Sensitive | lineage4.3.3 | None | SRR21239814 | Sensitive | lineage4.3.3 | None | SRR28393563 | MDR-TB | lineage4.3.3 | None | ERR6865881 | Sensitive | lineage4.3.3 | None | SRR28170815 | Sensitive | lineage4.3.3 | None | ERR2516490 | MDR-TB | lineage4.3.3 | pe | ERR775328 | MDR-TB | lineage4.3.3 | pe | ERR13261925 | MDR-TB | lineage4.3.3 | None | ERR1213923 | MDR-TB | lineage4.3.3 | pe | SRR21240151 | Sensitive | lineage4.3.3 | None | SRR19325562 | Sensitive | lineage4.3.3 | None | SRR22536486 | MDR-TB | lineage4.3.3 | None | ERR4813384 | MDR-TB | lineage4.1.1;lineage4.3.3 | pe | SRR19241797 | Sensitive | lineage4.3.3 | None | SRR21689490 | Sensitive | lineage4.3.3 | None | SRR28859959 | Sensitive | lineage4.3.3 | None | SRR28860008 | Sensitive | lineage4.3.3 | None | SRR28393556 | MDR-TB | lineage4.3.3 | None | SRR28393460 | MDR-TB | lineage4.3.3 | None | SRR28393767 | MDR-TB | lineage4.3.3 | None | SRR28393365 | Pre-XDR-TB | lineage4.3.3 | None | SRR28394089 | Sensitive | lineage4.3.3 | None | SRR28393462 | MDR-TB | lineage4.3.3 | None | SRR28393904 | MDR-TB | lineage4.3.3 | None | SRR28393469 | MDR-TB | lineage4.3.3 | None | ERR751616 | MDR-TB | lineage4.3.3 | pe | SRR30049954 | Sensitive | lineage4.3.3 | None | ERR13260652 | MDR-TB | lineage4.3.3 | None | SRR30182629 | Sensitive | lineage4.3.3 | None | SAMEA5569803 | Pre-XDR-TB | lineage4.3.3 | None | SRR20958093 | Sensitive | lineage4.3.3 | None | SRR29055726 | Sensitive | lineage4.3.3 | None | ERR1034671 | MDR-TB | lineage4.3.3 | co | ERR10561933 | Sensitive | lineage4.3.3 | None | SAMEA5569827 | MDR-TB | lineage4.3.3 | None | ERR3287813 | MDR-TB | lineage4.3.3 | pe | ERR3287732 | MDR-TB | lineage4.3.3 | pe | ERR3287818 | MDR-TB | lineage4.3.3 | pe | ERR4024893 | Sensitive | lineage4.3.3 | None | ERR775358 | MDR-TB | lineage4.3.3 | pe | SRR19221476 | Sensitive | lineage4.3.3 | None | ERR4813004 | HR-TB | lineage4.3.3 | None | ERR12118056 | Pre-XDR-TB | lineage4.3.3 | None | ERR13260617 | MDR-TB | lineage4.3.3 | None | SRR20958073 | Sensitive | lineage4.3.3 | None | SRR22461585 | MDR-TB | lineage4.3.3 | None | SRR19241780 | Sensitive | lineage4.3.3 | None | SRR20958087 | Sensitive | lineage4.3.3 | None | SRR20958144 | Sensitive | lineage4.3.3 | None | SRR28393676 | MDR-TB | lineage4.3.3 | None | ERR13260639 | MDR-TB | lineage4.3.3 | None | SRR28394216 | MDR-TB | lineage4.3.3 | None | SRR7517834 | MDR-TB | lineage4.3.3 | pe | ERR4812964 | MDR-TB | lineage4.3.3 | pe | ERR4812993 | MDR-TB | lineage4.3.3 | None | SRR20958109 | Sensitive | lineage4.3.3 | None | SRR20958146 | Sensitive | lineage4.3.3 | None | SRR20958098 | Sensitive | lineage4.3.3 | None | SRR22461695 | MDR-TB | lineage4.3.3 | None | ERR4829788 | MDR-TB | lineage4.3.3 | it | SRR20958123 | Sensitive | lineage4.3.3;lineage4.9 | None | ERR7911376 | MDR-TB | lineage4.3.3 | pe | ERR6866954 | Sensitive | lineage4.3.3 | None | ERR4813019 | MDR-TB | lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR751591 | Pre-XDR-TB | lineage4.3.3 | pe | SRR29052972 | Sensitive | lineage4.3.3 | None | ERR4024528 | Sensitive | lineage4.3.3 | None | SRR16370478 | MDR-TB | lineage4.3.3 | None | ERR13260227 | MDR-TB | lineage4.3.3 | None | SRR10130137 | Sensitive | lineage4.3.3 | None | ERR13261590 | HR-TB | lineage4.3.3 | None | ERR11068260 | Sensitive | lineage4.3.3 | None | ERR13260211 | MDR-TB | lineage4.3.3 | None | ERR13261885 | MDR-TB | lineage4.3.3 | None | SRR13870403 | Pre-XDR-TB | lineage4.3.3 | None | ERR12268359 | Sensitive | lineage4.3.3 | None | ERR2510238 | MDR-TB | lineage4.3.3 | pe | SRR28860051 | Other | lineage4.3.3 | None | SRR28514706 | Sensitive | lineage4.3.3 | None | ERR4813082 | MDR-TB | lineage4.3.3 | pe | SRR19241777 | Sensitive | lineage4.3.3 | None | SRR21690194 | Sensitive | lineage4.3.3 | None | SRR19241766 | Sensitive | lineage4.3.3 | None | ERR2516527 | Pre-XDR-TB | lineage4.3.3 | None | ERR2516668 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4829814 | Sensitive | lineage4.3.3 | it | ERR3287747 | MDR-TB | lineage4.3.3 | pe | SRR20958086 | Sensitive | lineage4.3.3 | None | ERR13260697 | MDR-TB | lineage4.3.3 | None | ERR13261618 | MDR-TB | lineage4.3.3 | None | ERR2510232 | MDR-TB | lineage4.3.3 | pe | SRR29052752 | Sensitive | lineage4.3.3 | None | ERR13267441 | MDR-TB | lineage4.3.3 | None | ERR1034677 | MDR-TB | lineage4.3.3 | co | ERR3287363 | Pre-XDR-TB | lineage4.3.3 | pe | ERR10561952 | Sensitive | lineage4.3.3 | None | ERR2510194 | MDR-TB | lineage4.3.3 | pe | ERR4817071 | Sensitive | lineage4.3.3 | gb | SRR7517680 | Sensitive | lineage4.3.3 | pe | SRR19241796 | Sensitive | lineage4.3.3 | None | SRR28394257 | MDR-TB | lineage4.3.3 | None | ERR751351 | MDR-TB | lineage4.3.3 | pe | SRR10147698 | MDR-TB | lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None |
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