lineage | Count |
---|---|
lineage3 | 201 |
lineage6.3.1 | 4 |
lineage2.2.1.1;lineage3 | 1 |
2 | |
lineage4.3.2 | 1 |
lineage3;lineage4 | 2 |
lineage1.1.3.1;lineage3 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
lineage2.2.1;lineage3 | 1 |
lineage3.1.2 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 216 |
ID | Drug resistance | Lineage | Country iso2 | SRR28045900 | Sensitive | lineage3 | None | SRR28045449 | Pre-XDR-TB | lineage3 | None | SRR28351458 | Sensitive | lineage3 | None | SRR28046338 | Sensitive | lineage3 | None | ERR13266873 | MDR-TB | lineage3 | None | ERR13290876 | Pre-XDR-TB | lineage3 | None | SRR28044696 | Sensitive | lineage3 | None | SRR28045673 | Sensitive | lineage3 | None | ERR2510278 | MDR-TB | lineage3 | pk | ERR2510600 | Pre-XDR-TB | lineage3 | pk | ERR2510612 | MDR-TB | lineage3 | pk | ERR2510642 | Pre-XDR-TB | lineage3 | pk | SAMN02231178 | Sensitive | lineage6.3.1 | ml | SRR25827635 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | ERR13291896 | Other | lineage3 | None | SRR28044600 | Sensitive | lineage3 | None | ERR11068569 | Sensitive | lineage3 | None | ERR2513055 | Sensitive | lineage3 | gb | ERR2513832 | Other | lineage3 | gb | SRR2100711 | Sensitive | lineage3 | None | ERR4553569 | MDR-TB | None | ERR4553556 | MDR-TB | lineage3 | None | SRR22251867 | Sensitive | lineage3 | None | SRR22424902 | MDR-TB | lineage3 | None | ERR3276217 | Sensitive | lineage3 | nl | SRR7070475 | HR-TB | lineage3 | None | SRR5341438 | Other | lineage3 | None | SRR28868462 | Sensitive | lineage3 | None | ERR4799291 | Pre-XDR-TB | lineage3 | in | ERR2515053 | Sensitive | lineage3 | None | SRR6964586 | Sensitive | lineage3 | None | ERR2512557 | Sensitive | lineage3 | gb | ERR1034658 | Pre-XDR-TB | lineage3 | bg | SRR29772693 | Pre-XDR-TB | lineage3 | None | SRR28351565 | HR-TB | lineage3 | None | SRR26112035 | Other | lineage3 | None | SRR12420543 | Sensitive | lineage3 | None | SRR28044637 | Sensitive | lineage3 | None | ERR11050925 | Sensitive | lineage3 | None | ERR4799347 | MDR-TB | lineage3 | in | ERR10465910 | HR-TB | lineage3 | None | SRR24114353 | MDR-TB | lineage3 | None | ERR2513799 | Sensitive | lineage3 | gb | SRR15014728 | MDR-TB | lineage3 | None | SRR28409667 | Sensitive | lineage3 | None | SRR6797718 | Sensitive | lineage3 | None | SRR7069166 | Sensitive | lineage3 | None | ERR4798863 | Sensitive | lineage3 | in | ERR4829329 | Sensitive | lineage3 | None | SRR25340826 | Sensitive | lineage3 | None | SRR28393735 | RR-TB | lineage4.3.2 | None | ERR4800249 | Sensitive | lineage3 | in | SRR28045493 | Sensitive | lineage3 | None | SRR28045211 | Sensitive | lineage3 | None | ERR2446231 | Sensitive | lineage3 | nl | ERR4818381 | Sensitive | lineage3 | None | ERR2510564 | MDR-TB | lineage3 | None | SRR1173021 | Sensitive | lineage3 | None | SRR6152877 | Sensitive | lineage3 | ca | ERR2513049 | Sensitive | lineage3 | gb | ERR2514935 | HR-TB | lineage3 | gb | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR25340845 | Sensitive | lineage3 | None | SRR13180221 | HR-TB | lineage3 | None | SRR28044906 | Sensitive | lineage3 | None | ERR4797006 | Sensitive | lineage3 | in | SAMN02599111 | Sensitive | lineage3 | in | ERR11050451 | Sensitive | lineage3 | None | SRR21690647 | Sensitive | lineage3 | None | ERR114499 | Sensitive | lineage3;lineage4 | None | ERR4831516 | Sensitive | lineage3 | pk | SRR21733001 | Sensitive | lineage3 | None | SRR22251518 | Sensitive | lineage3 | None | ERR4800258 | Sensitive | lineage3 | in | ERR4800227 | Sensitive | lineage3 | in | ERR13291943 | Sensitive | lineage3 | None | SRR28046102 | Pre-XDR-TB | lineage3 | None | SRR28045454 | Sensitive | lineage3 | None | SRR6046716 | Other | lineage3 | gb | ERR4797011 | Sensitive | lineage1.1.3.1;lineage3 | in | SRR28045204 | Sensitive | lineage3 | None | SRR29440568 | Sensitive | lineage3 | None | ERR4796591 | Sensitive | lineage3 | in | SAMN02599141 | Sensitive | lineage3 | in | ERR9121591 | Sensitive | lineage3 | None | ERR4814600 | Sensitive | lineage3 | None | SRR21709612 | Other | lineage3 | None | SRR28868672 | Other | lineage3 | None | SRR29096780 | Sensitive | lineage3 | None | ERR3275444 | Sensitive | lineage3 | nl | ERR4796829 | Sensitive | lineage3 | in | SRR7068892 | Sensitive | lineage3 | None | ERR4195227 | Sensitive | lineage3 | None | ERR4831508 | Pre-XDR-TB | lineage3 | pk | ERR387059 | HR-TB | lineage3 | None | ERR11049422 | Sensitive | lineage3 | None | ERR2512856 | Sensitive | lineage3 | gb | ERR4796611 | Sensitive | lineage3 | in | ERR4799601 | Sensitive | lineage3 | in | SRR2101201 | Sensitive | lineage3 | None | SRR15014757 | HR-TB | lineage3 | None | ERR4818327 | Sensitive | lineage3 | None | SRR5341320 | Other | lineage3 | in | SRR21732846 | Sensitive | lineage3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR11049791 | Sensitive | lineage3 | None | SRR6797271 | Sensitive | lineage3 | None | SRR22424891 | HR-TB | lineage3 | None | ERR4817506 | Sensitive | lineage3 | gb | SRR28868725 | Sensitive | lineage3 | None | ERR4798683 | Sensitive | lineage3 | in | SRR22424911 | HR-TB | lineage3 | None | ERR4799538 | Pre-XDR-TB | lineage3 | None | ERR4828529 | Sensitive | lineage3 | vn | SRR17657954 | HR-TB | lineage3 | None | ERR4818465 | Other | lineage3 | gb | ERR13289741 | Sensitive | lineage3 | None | ERR117708 | Sensitive | lineage3 | None | ERR4799746 | Pre-XDR-TB | lineage3 | in | ERR4815925 | Other | lineage3 | gb | SRR14520060 | Sensitive | lineage3 | None | ERR4814426 | Sensitive | lineage3 | None | ERR4800436 | Sensitive | lineage3 | in | ERR11082245 | MDR-TB | lineage3 | None | SRR21732904 | Sensitive | lineage3 | None | SRR1173022 | Sensitive | lineage3 | None | ERR4820609 | Sensitive | lineage3 | gb | ERR2514544 | Sensitive | lineage3 | gb | ERR2510476 | RR-TB | lineage3 | pk | SRR28351548 | Other | lineage3 | None | ERR4814450 | Sensitive | lineage3 | gb | ERR3132170 | HR-TB | lineage3 | None | ERR4797557 | MDR-TB | lineage3 | in | ERR2515080 | Sensitive | lineage3 | gb | ERR2513981 | Sensitive | lineage3 | gb | SRR25827790 | XDR-TB | lineage2.2.1;lineage3 | None | ERR688010 | Sensitive | lineage3 | None | SRR25827353 | XDR-TB | lineage3.1.2 | None | SRR1162477 | Sensitive | lineage6.3.1 | None | ERR4799707 | Sensitive | lineage3 | None | SRR13180223 | HR-TB | lineage3 | None | SRR22249878 | Sensitive | lineage3 | None | ERR230086 | Sensitive | lineage3 | None | SRR28045509 | Sensitive | lineage3 | None | ERR4796830 | Sensitive | lineage3 | in | SRR7068931 | Sensitive | lineage3 | None | SRR21710595 | Sensitive | lineage3 | None | SRR1162738 | Sensitive | lineage6.3.1 | None | ERR4822197 | Sensitive | lineage3 | gb | SRR29440627 | Sensitive | lineage3 | None | SRR29772684 | HR-TB | lineage3 | None | ERR2510604 | Pre-XDR-TB | lineage3 | pk | ERR2513133 | Sensitive | lineage3 | gb | ERR11043040 | Sensitive | lineage3 | None | SRR1173147 | Sensitive | lineage3 | None | SRR2100346 | Sensitive | lineage3;lineage4 | None | SRR15014784 | Sensitive | lineage3 | None | SRR17856659 | Pre-XDR-TB | lineage3 | None | ERR13261301 | Pre-XDR-TB | lineage3 | None | ERR13266432 | Pre-XDR-TB | lineage3 | None | ERR13289939 | Sensitive | lineage3 | None | ERR4798690 | Pre-XDR-TB | lineage3 | in | ERR2513801 | Sensitive | lineage3 | gb | SRR29017236 | MDR-TB | lineage3 | None | ERR552722 | Sensitive | lineage3 | de | SRR29096268 | Sensitive | lineage3 | None | SRR14088386 | MDR-TB | lineage3 | None | SRR6650371 | Sensitive | lineage3 | None | SRR5341276 | MDR-TB | lineage3 | in | ERR4800054 | Sensitive | lineage3 | in | SRR21691122 | Sensitive | lineage3 | None | ERR4796498 | Sensitive | lineage3 | in | SRR21732894 | Sensitive | lineage3 | None | SRR28044683 | Sensitive | lineage3 | None | SRR6045876 | Sensitive | lineage3 | gb | ERR4798160 | Sensitive | lineage3 | in | SRR22251096 | Sensitive | lineage3 | None | ERR550846 | Sensitive | lineage3 | de | ERR4821024 | Sensitive | lineage3 | None | SRR22249449 | Other | lineage3 | None | SRR21733108 | Sensitive | lineage3 | None | SRR6046565 | Sensitive | lineage3 | None | SRR28044688 | XDR-TB | lineage3 | None | SRR26112388 | Sensitive | lineage3 | None | ERR1034578 | Sensitive | lineage3 | pk | ERR4553928 | MDR-TB | None | ERR234179 | Sensitive | lineage3 | None | ERR2512906 | Sensitive | lineage3 | gb | SRR1173528 | Sensitive | lineage3 | None | SRR2100268 | Sensitive | lineage3 | None | ERR4831144 | Sensitive | lineage3 | de | ERR4796868 | MDR-TB | lineage3 | in | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR13180301 | HR-TB | lineage3 | None | SRR6046803 | Sensitive | lineage3 | gb | SRR1103499 | Sensitive | lineage6.3.1 | None | ERR2510576 | Pre-XDR-TB | lineage3 | pk | ERR11591442 | Sensitive | lineage3 | None | ERR4800366 | Sensitive | lineage3 | in | ERR4798646 | Sensitive | lineage3 | in | ERR2516894 | MDR-TB | lineage3 | gb | ERR11080841 | Sensitive | lineage3 | None | ERR3275901 | Sensitive | lineage3 | nl | ERR11050851 | Sensitive | lineage3 | None | SRR27450515 | Sensitive | lineage3 | None | ERR1034691 | Sensitive | lineage3 | in | ERR386795 | Sensitive | lineage3 | None | SRR29097083 | Sensitive | lineage3 | None | ERR2843483 | Sensitive | lineage3 | None | ERR11044288 | Sensitive | lineage3 | None | SRR5341266 | Pre-XDR-TB | lineage3 | in | ERR2517466 | Sensitive | lineage3 | nl | ERR4819550 | Other | lineage3 | None | ERR4820571 | HR-TB | lineage3 | None | ERR351863 | Sensitive | lineage3 | None | SRR13180222 | HR-TB | lineage3 | None |
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