Rv3793 - c.2379C>T
Drug resistance types
204 Sensitive
10 RR-TB
23 HR-TB
36 MDR-TB
22 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage4.9 | 26 |
| lineage2.2.1 | 273 |
| lineage2.2.1.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.1;lineage4.4.2 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.8 | 4 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 313 |
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1219987 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR20969387 | Sensitive | lineage2.2.1 | None | SRR1223366 | Sensitive | lineage2.2.1 | None | ERR6866509 | Sensitive | lineage2.2.1 | None | SRR1226262 | Sensitive | lineage2.2.1 | None | SRR23316625 | Sensitive | lineage2.2.1 | None | DRR130162 | MDR-TB | lineage2.2.1 | None | SRR1224951 | Sensitive | lineage2.2.1;lineage4.9 | None | DRR188898 | HR-TB | lineage2.2.1 | None | SRR6797365 | HR-TB | lineage2.2.1.2 | None | SRR1222956 | Sensitive | lineage2.2.1 | None | SRR21277657 | Other | lineage2.2.1 | None | SRR15723163 | Sensitive | lineage2.2.1 | None | SRR1214289 | Sensitive | lineage2.2.1 | None | SRR21732059 | HR-TB | lineage2.2.1 | None | SRR21291123 | Sensitive | lineage2.2.1 | None | ERR4812481 | Sensitive | lineage2.2.1 | pe | SRR1219272 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR114474 | Sensitive | lineage2.2.1 | None | SRR1216243 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR21674623 | Sensitive | lineage2.2.1 | None | SRR22250184 | Sensitive | lineage2.2.1 | None | SRR18548951 | RR-TB | lineage2.2.1 | None | SRR21277785 | Sensitive | lineage2.2.1 | None | ERR4812586 | Sensitive | lineage2.2.1 | pe | SRR21277864 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315923 | Sensitive | lineage2.2.1 | None | SRR2100322 | Sensitive | lineage2.2.1 | None | SRR1223097 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR11081021 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277796 | HR-TB | lineage2.2.1 | None | ERR3132199 | Sensitive | lineage2.2.1 | None | SRR21864653 | Sensitive | lineage2.2.1 | None | SRR1215486 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1214055 | Sensitive | lineage2.2.1 | None | SRR21887723 | Pre-XDR-TB | lineage2.2.1 | None | ERR12554665 | HR-TB | lineage2.2.1 | None | SRR1222562 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR9125794 | Sensitive | lineage2.2.1 | None | SRR24827271 | Sensitive | lineage2.2.1 | None | SRR1232034 | Sensitive | lineage2.2.1 | None | SRR27450526 | HR-TB | lineage2.2.1 | None | ERR4811194 | Sensitive | lineage2.2.1 | cn | SRR1222225 | Sensitive | lineage2.2.1 | None | ERR12328156 | HR-TB | lineage2.2.1 | None | SRR21732499 | Sensitive | lineage2.2.1 | None | ERR234114 | Sensitive | lineage2.2.1 | cn | SRR1231362 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR15723099 | Sensitive | lineage2.2.1 | None | SRR15368760 | MDR-TB | lineage2.2.1 | None | SRR10305835 | Other | lineage2.2.1 | None | DRR188539 | Sensitive | lineage2.2.1 | None | SRR25515248 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549001 | Sensitive | lineage2.2.1 | None | SRR21887655 | Pre-XDR-TB | lineage2.2.1 | None | DRR473716 | Sensitive | lineage2.2.1 | None | SRR12420315 | Sensitive | lineage2.2.1 | None | ERR4812598 | Sensitive | lineage2.2.1 | pe | SRR1226201 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4812536 | Sensitive | lineage2.2.1 | pe | SRR1231613 | Sensitive | lineage2.2.1 | None | SRR1220968 | Sensitive | lineage2.2.1 | None | ERR4821190 | Other | lineage2.2.1 | gb | SRR1214497 | Sensitive | lineage2.2.1 | None | SRR1215501 | Sensitive | lineage2.2.1 | None | ERR4822360 | MDR-TB | lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4810496 | Sensitive | lineage2.2.1 | None | SRR21277236 | Sensitive | lineage2.2.1 | None | DRR189012 | Sensitive | lineage2.2.1 | None | SRR1223529 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6280222 | Other | lineage2.2.1 | cn | SRR28045375 | Sensitive | lineage2.2.1 | None | SRR27069364 | Pre-XDR-TB | lineage2.2.1 | None | SRR1215649 | Sensitive | lineage2.2.1 | None | SRR1723516 | MDR-TB | lineage2.2.1 | None | SRR12420330 | Sensitive | lineage2.2.1 | None | SRR21277424 | HR-TB | lineage2.2.1 | None | SRR1223507 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR1215488 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR15369029 | Sensitive | lineage2.2.1 | None | SRR15368800 | Sensitive | lineage2.2.1 | None | SRR21277745 | Sensitive | lineage2.2.1 | None | SRR15723028 | Sensitive | lineage2.2.1 | None | SRR10808602 | Sensitive | lineage2.2.1 | None | SRR6280328 | Other | lineage2.2.1 | cn | DRR188599 | Sensitive | lineage2.2.1 | None | SRR21732427 | HR-TB | lineage2.2.1 | None | SRR15723301 | Sensitive | lineage2.2.1 | None | ERR3132182 | Sensitive | lineage2.2.1 | None | SRR1220581 | Sensitive | lineage2.2.1 | None | SRR15723015 | RR-TB | lineage2.2.1 | None | SRR21277782 | Sensitive | lineage2.2.1 | None | SRR1218770 | Sensitive | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4195605 | Sensitive | lineage2.2.1 | None | SRR15316103 | Sensitive | lineage2.2.1 | None | ERR6866691 | Sensitive | lineage2.2.1 | None | SRR1723514 | Sensitive | lineage2.2.1 | None | SRR21576538 | MDR-TB | lineage2.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | DRR130075 | MDR-TB | lineage2.2.1 | None | SRR16915763 | Sensitive | lineage2.2.1 | None | ERR4819204 | Other | lineage2.2.1 | gb | SRR2024964 | MDR-TB | lineage2.2.1 | cn | SRR15723283 | Sensitive | lineage2.2.1 | None | SRR21576707 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024880 | Sensitive | lineage2.2.1 | None | SRR1219063 | Sensitive | lineage2.2.1 | None | SRR15723208 | Sensitive | lineage2.2.1 | None | SRR15316101 | MDR-TB | lineage2.2.1 | None | ERR6866912 | Sensitive | lineage2.2.1 | None | SRR10808786 | Sensitive | lineage2.2.1 | None | DRR188700 | Sensitive | lineage2.2.1 | None | SRR12420530 | Sensitive | lineage2.2.1 | None | SRR20969752 | MDR-TB | lineage2.2.1 | None | SRR14519138 | Sensitive | lineage2.2.1 | None | SRR1231658 | Sensitive | lineage2.2.1 | None | ERR2184415 | Sensitive | lineage2.2.1 | pe | ERR2503489 | Sensitive | lineage2.2.1 | fi | SRR21576602 | RR-TB | lineage2.2.1 | None | SRR20969477 | Pre-XDR-TB | lineage2.2.1;lineage4.4.2 | None | SRR15723053 | Sensitive | lineage2.2.1 | None | SRR15315801 | Sensitive | lineage2.2.1 | None | DRR188556 | Sensitive | lineage2.2.1 | None | ERR2020069 | Pre-XDR-TB | lineage2.2.1 | None | SRR14270076 | Sensitive | lineage2.2.1 | None | SRR1230428 | Sensitive | lineage2.2.1 | None | ERR4812716 | Sensitive | lineage2.2.1 | pe | SRR15315895 | Sensitive | lineage2.2.1 | None | DRR474008 | Sensitive | lineage2.2.1 | None | SRR1223306 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4817057 | Other | lineage2.2.1 | gb | DRR189117 | RR-TB | lineage2.2.1 | None | SRR25534155 | Sensitive | lineage2.2.1 | None | SRR1723515 | MDR-TB | lineage2.2.1 | None | SRR15723209 | Sensitive | lineage2.2.1 | None | DRR130238 | RR-TB | lineage2.2.1 | None | DRR188476 | Sensitive | lineage2.2.1 | None | SRR1213921 | Sensitive | lineage2.2.1 | None | SRR1229760 | Sensitive | lineage2.2.1 | None | SRR27450125 | HR-TB | lineage2.2.1 | None | SRR1214047 | Sensitive | lineage2.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR1219048 | Sensitive | lineage2.2.1 | None | SRR21277446 | Sensitive | lineage2.2.1 | None | SRR18548958 | Sensitive | lineage2.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR751934 | RR-TB | lineage2.2.1 | th | DRR188586 | Sensitive | lineage2.2.1 | None | ERR6865846 | Sensitive | lineage2.2.1 | None | DRR474163 | Sensitive | lineage2.2.1 | None | ERR9121721 | Sensitive | lineage2.2.1 | None | DRR188577 | Sensitive | lineage2.2.1 | None | SRR21291165 | Sensitive | lineage2.2.1 | None | SRR25206852 | MDR-TB | lineage2.2.1 | None | SRR1232114 | Sensitive | lineage2.2.1 | None | SRR1232426 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1221022 | Sensitive | lineage2.2.1 | None | SRR21277642 | Sensitive | lineage2.2.1 | None | SRR16370385 | HR-TB | lineage2.2.1 | None | ERR11081879 | Sensitive | lineage2.2.1 | None | SRR21576695 | Pre-XDR-TB | lineage2.2.1 | None | SRR1232521 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1231685 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR21277560 | Sensitive | lineage2.2.1 | None | SRR10808468 | Sensitive | lineage2.2.1 | None | SRR1230220 | Sensitive | lineage2.2.1 | None | SRR1222408 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR502930 | MDR-TB | lineage2.2.1 | None | SRR15368989 | MDR-TB | lineage2.2.1 | None | DRR188549 | Sensitive | lineage2.2.1 | None | DRR188468 | Sensitive | lineage2.2.1 | None | SRR28394123 | Sensitive | lineage2.2.1 | None | SRR28046340 | MDR-TB | lineage2.2.1 | None | SRR28045922 | Pre-XDR-TB | lineage2.2.1 | None | SRR28409657 | Sensitive | lineage2.2.1 | None | SRR8651656 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8651589 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8651620 | RR-TB | lineage2.2.1 | cn | SRR15368897 | Pre-XDR-TB | lineage2.2.1 | None | SRR21576611 | RR-TB | lineage2.2.1 | None | SRR6480517 | Sensitive | lineage2.2.1 | None | SRR15369074 | Sensitive | lineage2.2.1 | None | SRR21277314 | Other | lineage2.2.1 | None | SRR1221668 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1223020 | Sensitive | lineage2.2.1 | None | SRR18002924 | Other | lineage2.2.1 | None | SRR14519116 | Sensitive | lineage2.2.1 | None | SRR21031720 | Sensitive | lineage2.2.1 | None | SRR16089678 | Sensitive | lineage2.2.1 | None | SRR1232403 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR21277841 | MDR-TB | lineage2.2.1 | None | SRR1219265 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR21732284 | HR-TB | lineage2.2.1 | None | DRR188524 | Sensitive | lineage2.2.1 | None | DRR473883 | Sensitive | lineage2.2.1 | None | SRR1231695 | Sensitive | lineage2.2.1 | None | SRR15723090 | Sensitive | lineage2.2.1 | None | DRR473871 | Other | lineage2.2.1 | None | SRR1232843 | Sensitive | lineage2.2.1 | None | SRR1011508 | Sensitive | lineage2.2.1 | None | SRR1220035 | Sensitive | lineage2.2.1 | None | SAMN03246269 | MDR-TB | lineage2.2.1 | cn | SRR1222223 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1222241 | Sensitive | lineage2.2.1 | None | SRR1221586 | Sensitive | lineage2.2.1 | None | SRR1228646 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4816123 | Other | lineage2.2.1 | gb | SRR1218932 | Sensitive | lineage2.2.1 | None | SRR21277453 | HR-TB | lineage2.2.1 | None | SRR21887728 | Pre-XDR-TB | lineage2.2.1 | None | SRR1220281 | Sensitive | lineage2.2.1 | None | SRR15316106 | Sensitive | lineage2.2.1 | None | SRR21277866 | MDR-TB | lineage2.2.1 | None | ERR9891963 | HR-TB | lineage2.2.1 | None | SRR1225280 | Sensitive | lineage2.2.1 | None | SRR21291125 | Sensitive | lineage2.2.1 | None | SRR18213882 | Sensitive | lineage2.2.1 | None | SRR1232839 | Sensitive | lineage2.2.1 | None | SRR1232423 | Sensitive | lineage2.2.1 | None | ERR2020067 | Other | lineage2.2.1 | None | SRR1218902 | Sensitive | lineage2.2.1 | None | DRR034428 | Sensitive | lineage2.2.1 | None | ERR552681_ERR552682 | MDR-TB | lineage4.8 | None | ERR552681 | MDR-TB | lineage4.8 | None | SAMEA2534816 | MDR-TB | lineage4.8 | uz | SRR21277854 | MDR-TB | lineage2.2.1 | None | SRR15315773 | Sensitive | lineage2.2.1 | None | SRR15368899 | MDR-TB | lineage2.2.1 | None | SRR18054787 | Pre-XDR-TB | lineage2.2.1 | None | ERR718279 | HR-TB | lineage2.2.1 | th | SRR21291124 | Sensitive | lineage2.2.1 | None | DRR188738 | Sensitive | lineage2.2.1 | None | SRR1233652 | Sensitive | lineage2.2.1 | None | SRR1222277 | Sensitive | lineage2.2.1 | None | ERR6866322 | Sensitive | lineage2.2.1 | None | ERR6866997 | Sensitive | lineage2.2.1 | None | ERR2516127 | Sensitive | lineage2.2.1 | es | SRR21576584 | MDR-TB | lineage2.2.1 | None | SRR15723007 | Sensitive | lineage2.2.1 | None | SRR27450371 | HR-TB | lineage2.2.1 | None | SRR21576670 | MDR-TB | lineage2.2.1 | None | SRR21291120 | Sensitive | lineage2.2.1 | None | SRR12142354 | Sensitive | lineage2.2.1 | None | DRR188623 | Sensitive | lineage2.2.1 | None | SRR1218985 | Sensitive | lineage2.2.1 | None | SRR12062497 | MDR-TB | lineage2.2.1 | None | SRR15315904 | Sensitive | lineage2.2.1 | None | ERR4810777 | RR-TB | lineage2.2.1 | cn | SRR1232858 | Sensitive | lineage2.2.1 | None | ERR234136 | Sensitive | lineage2.2.1 | cn | SRR16058726 | Sensitive | lineage2.2.1 | None | SRR15316213 | HR-TB | lineage2.2.1 | None | SRR6280165 | Other | lineage2.2.1 | cn | SRR25827820 | Pre-XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | SRR1232956 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1214065 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1232400 | Sensitive | lineage2.2.1 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR8237347 | Sensitive | lineage2.2.1 | None | DRR188535 | Sensitive | lineage2.2.1 | None | SRR12062498 | MDR-TB | lineage2.2.1 | None | SRR21864654 | Sensitive | lineage2.2.1 | None | SRR21277698 | HR-TB | lineage2.2.1 | None | SRR16058121 | Sensitive | lineage2.2.1 | None | SRR1222550 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1222801 | Sensitive | lineage2.2.1 | None | SRR21277430 | Other | lineage2.2.1 | None | ERR4829327 | Sensitive | lineage2.2.1 | None | SRR1218861 | Sensitive | lineage2.2.1 | None | ERR552682 | MDR-TB | lineage4.8 | None | SRR21732963 | HR-TB | lineage2.2.1 | None | SRR10306009 | MDR-TB | lineage2.2.1 | None | ERR6866129 | Sensitive | lineage2.2.1 | None | SRR15368965 | Sensitive | lineage2.2.1 | None | SRR15316068 | HR-TB | lineage2.2.1 | None | ERR1213939 | MDR-TB | lineage2.2.1;lineage4.3.3 | pe | SRR6824500 | MDR-TB | lineage2.2.1 | cn | ERR9125452 | Sensitive | lineage2.2.1 | None | DRR188710 | Sensitive | lineage2.2.1 | None | SRR21031724 | Sensitive | lineage2.2.1 | None | SRR27069385 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040448 | MDR-TB | lineage2.2.1 | None | SRR21887665 | Pre-XDR-TB | lineage2.2.1 | None | SRR1218763 | Sensitive | lineage2.2.1 | None | SRR15316456 | Sensitive | lineage2.2.1 | None | SRR1231820 | Sensitive | lineage2.2.1 | None | SRR1220119 | Sensitive | lineage2.2.1 | None | ERR4810781 | Sensitive | lineage2.2.1 | cn | SRR21277166 | Sensitive | lineage2.2.1 | None | SRR21887765 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024957 | MDR-TB | lineage2.2.1 | cn | DRR188945 | Sensitive | lineage2.2.1 | None | SRR1224305 | Sensitive | lineage2.2.1 | None | SRR21732761 | HR-TB | lineage2.2.1 | None | DRR189125 | Sensitive | lineage2.2.1 | None | ERR4811122 | Sensitive | lineage2.2.1 | cn | SRR21031688 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389428 | HR-TB | lineage2.2.1 | None | SRR1220364 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1214040 | Sensitive | lineage2.2.1 | None | SRR6280242 | Other | lineage2.2.1 | cn | ERR4810871 | Sensitive | lineage2.2.1 | cn | SRR1225803 | Sensitive | lineage2.2.1 | None | SRR2024972 | MDR-TB | lineage2.2.1 | cn | SRR15315893 | Sensitive | lineage2.2.1 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | ERR1213929 | Sensitive | lineage2.2.1 | pe | DRR189128 | Sensitive | lineage2.2.1 | None | ERR752136 | Sensitive | lineage2.2.1 | th |
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