Rv3793 - c.2379C>T


Drug resistance types
204 Sensitive 10 RR-TB 23 HR-TB 36 MDR-TB 22 Pre-XDR-TB 0 XDR-TB 18 Other
lineage Counts
lineage Count
lineage2.2.1 273
lineage2.2.1;lineage4.9 26
lineage4.8 4
lineage2.2.1.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.2.1;lineage4.3.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.2.1;lineage4.4.2 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.2.1;lineage4.2.2.2 1
lineage4.2;lineage4.6.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 313
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1723516 MDR-TB lineage2.2.1 None
SRR21576611 RR-TB lineage2.2.1 None
SRR21887665 Pre-XDR-TB lineage2.2.1 None
SRR1218763 Sensitive lineage2.2.1 None
SRR15316456 Sensitive lineage2.2.1 None
SRR12420330 Sensitive lineage2.2.1 None
SRR21277424 HR-TB lineage2.2.1 None
SRR1223507 Sensitive lineage2.2.1;lineage4.9 None
SRR1231820 Sensitive lineage2.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
ERR4810781 Sensitive lineage2.2.1 cn
SRR21277166 Sensitive lineage2.2.1 None
DRR188524 Sensitive lineage2.2.1 None
SRR15368800 Sensitive lineage2.2.1 None
SRR2024957 MDR-TB lineage2.2.1 cn
DRR188945 Sensitive lineage2.2.1 None
SRR1011508 Sensitive lineage2.2.1 None
SRR1220035 Sensitive lineage2.2.1 None
ERR4195605 Sensitive lineage2.2.1 None
SRR15316103 Sensitive lineage2.2.1 None
ERR6866691 Sensitive lineage2.2.1 None
SRR1723514 Sensitive lineage2.2.1 None
SRR1222241 Sensitive lineage2.2.1 None
SRR1221586 Sensitive lineage2.2.1 None
SRR1228646 Sensitive lineage2.2.1;lineage4.9 None
ERR4816123 Other lineage2.2.1 gb
SRR1218932 Sensitive lineage2.2.1 None
SRR21277453 HR-TB lineage2.2.1 None
SRR21887728 Pre-XDR-TB lineage2.2.1 None
SRR1220281 Sensitive lineage2.2.1 None
SRR21031688 Pre-XDR-TB lineage2.2.1 None
SRR15723208 Sensitive lineage2.2.1 None
SRR1232839 Sensitive lineage2.2.1 None
SRR1232423 Sensitive lineage2.2.1 None
DRR188700 Sensitive lineage2.2.1 None
ERR2184415 Sensitive lineage2.2.1 pe
ERR552681 MDR-TB lineage4.8 None
ERR2503489 Sensitive lineage2.2.1 fi
SAMEA2534816 MDR-TB lineage4.8 uz
SRR21277854 MDR-TB lineage2.2.1 None
ERR1213929 Sensitive lineage2.2.1 pe
SRR15723053 Sensitive lineage2.2.1 None
SRR15315801 Sensitive lineage2.2.1 None
ERR6866509 Sensitive lineage2.2.1 None
SRR14270076 Sensitive lineage2.2.1 None
SRR1230428 Sensitive lineage2.2.1 None
DRR188738 Sensitive lineage2.2.1 None
DRR474008 Sensitive lineage2.2.1 None
SRR1223306 Sensitive lineage2.2.1;lineage4.9 None
ERR4817057 Other lineage2.2.1 gb
DRR189117 RR-TB lineage2.2.1 None
DRR188898 HR-TB lineage2.2.1 None
SRR6797365 HR-TB lineage2.2.1.2 None
SRR1233652 Sensitive lineage2.2.1 None
ERR2516127 Sensitive lineage2.2.1 es
SRR15723209 Sensitive lineage2.2.1 None
DRR130238 RR-TB lineage2.2.1 None
SRR1214289 Sensitive lineage2.2.1 None
SRR21732059 HR-TB lineage2.2.1 None
SRR15723007 Sensitive lineage2.2.1 None
SRR27450371 HR-TB lineage2.2.1 None
SRR21291123 Sensitive lineage2.2.1 None
SRR12142354 Sensitive lineage2.2.1 None
SRR12062497 MDR-TB lineage2.2.1 None
SRR22250184 Sensitive lineage2.2.1 None
ERR4812586 Sensitive lineage2.2.1 pe
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR1219048 Sensitive lineage2.2.1 None
SRR21277796 HR-TB lineage2.2.1 None
ERR3132199 Sensitive lineage2.2.1 None
SRR21864653 Sensitive lineage2.2.1 None
SRR1215486 Sensitive lineage2.2.1;lineage4.9 None
SRR6280165 Other lineage2.2.1 cn
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR25206852 MDR-TB lineage2.2.1 None
SRR12062498 MDR-TB lineage2.2.1 None
SRR15368760 MDR-TB lineage2.2.1 None
SRR10305835 Other lineage2.2.1 None
SRR1232426 Sensitive lineage2.2.1;lineage4.9 None
SRR1221022 Sensitive lineage2.2.1 None
SRR21277642 Sensitive lineage2.2.1 None
SRR21277698 HR-TB lineage2.2.1 None
SRR16058121 Sensitive lineage2.2.1 None
ERR11081879 Sensitive lineage2.2.1 None
ERR4812536 Sensitive lineage2.2.1 pe
SRR10808468 Sensitive lineage2.2.1 None
ERR4829327 Sensitive lineage2.2.1 None
SRR1222408 Sensitive lineage2.2.1;lineage4.9 None
SRR21732963 HR-TB lineage2.2.1 None
SRR15368965 Sensitive lineage2.2.1 None
ERR9125452 Sensitive lineage2.2.1 None
SRR21031724 Sensitive lineage2.2.1 None
SRR28046340 MDR-TB lineage2.2.1 None
SRR28409657 Sensitive lineage2.2.1 None
SRR27069364 Pre-XDR-TB lineage2.2.1 None
SRR27069385 Pre-XDR-TB lineage2.2.1 None
SRR10040448 MDR-TB lineage2.2.1 None
SRR14519116 Sensitive lineage2.2.1 None
SRR21031720 Sensitive lineage2.2.1 None
SRR16089678 Sensitive lineage2.2.1 None
SRR1220119 Sensitive lineage2.2.1 None
SRR1215488 Sensitive lineage2.2.1;lineage4.9 None
SRR21277745 Sensitive lineage2.2.1 None
SRR21887765 Pre-XDR-TB lineage2.2.1 None
DRR473883 Sensitive lineage2.2.1 None
SRR1231695 Sensitive lineage2.2.1 None
DRR473871 Other lineage2.2.1 None
SRR1232843 Sensitive lineage2.2.1 None
SRR1220581 Sensitive lineage2.2.1 None
SRR1218770 Sensitive lineage2.2.1 None
SRR21732761 HR-TB lineage2.2.1 None
DRR130075 MDR-TB lineage2.2.1 None
SRR16915763 Sensitive lineage2.2.1 None
ERR4819204 Other lineage2.2.1 gb
SRR2024964 MDR-TB lineage2.2.1 cn
SRR15723283 Sensitive lineage2.2.1 None
SRR21576707 Pre-XDR-TB lineage2.2.1 None
DRR189125 Sensitive lineage2.2.1 None
ERR4811122 Sensitive lineage2.2.1 cn
SRR15316101 MDR-TB lineage2.2.1 None
ERR9891963 HR-TB lineage2.2.1 None
SRR1214040 Sensitive lineage2.2.1 None
SRR18213882 Sensitive lineage2.2.1 None
SRR20969752 MDR-TB lineage2.2.1 None
SRR14519138 Sensitive lineage2.2.1 None
SRR1231658 Sensitive lineage2.2.1 None
SRR15315893 Sensitive lineage2.2.1 None
SRR21576602 RR-TB lineage2.2.1 None
DRR189128 Sensitive lineage2.2.1 None
ERR752136 Sensitive lineage2.2.1 th
SRR15315773 Sensitive lineage2.2.1 None
SRR18054787 Pre-XDR-TB lineage2.2.1 None
DRR188556 Sensitive lineage2.2.1 None
ERR718279 HR-TB lineage2.2.1 th
SRR23316625 Sensitive lineage2.2.1 None
DRR130162 MDR-TB lineage2.2.1 None
SRR21291124 Sensitive lineage2.2.1 None
SRR1222956 Sensitive lineage2.2.1 None
ERR6866997 Sensitive lineage2.2.1 None
SRR25534155 Sensitive lineage2.2.1 None
SRR1723515 MDR-TB lineage2.2.1 None
SRR1213921 Sensitive lineage2.2.1 None
SRR21291120 Sensitive lineage2.2.1 None
ERR4812481 Sensitive lineage2.2.1 pe
SRR1219272 Sensitive lineage2.2.1;lineage4.9 None
SRR27450125 HR-TB lineage2.2.1 None
ERR114474 Sensitive lineage2.2.1 None
SRR21674623 Sensitive lineage2.2.1 None
ERR4810777 RR-TB lineage2.2.1 cn
SRR21277785 Sensitive lineage2.2.1 None
SRR21277446 Sensitive lineage2.2.1 None
SRR1232858 Sensitive lineage2.2.1 None
SRR16058726 Sensitive lineage2.2.1 None
SRR2100322 Sensitive lineage2.2.1 None
SRR1223097 Sensitive lineage2.2.1;lineage4.9 None
SRR15316213 HR-TB lineage2.2.1 None
SRR18548958 Sensitive lineage2.2.1 None
SRR1214055 Sensitive lineage2.2.1 None
ERR12554665 HR-TB lineage2.2.1 None
SRR1222562 Sensitive lineage2.2.1;lineage4.9 None
SRR24827271 Sensitive lineage2.2.1 None
SRR1232034 Sensitive lineage2.2.1 None
ERR751934 RR-TB lineage2.2.1 th
SRR27450526 HR-TB lineage2.2.1 None
DRR188586 Sensitive lineage2.2.1 None
SRR1232956 Sensitive lineage2.2.1;lineage4.9 None
SRR1214065 Sensitive lineage2.2.1;lineage4.9 None
SRR1222225 Sensitive lineage2.2.1 None
ERR12328156 HR-TB lineage2.2.1 None
DRR474163 Sensitive lineage2.2.1 None
SRR1232400 Sensitive lineage2.2.1 None
ERR234114 Sensitive lineage2.2.1 cn
SRR8237347 Sensitive lineage2.2.1 None
SRR21291165 Sensitive lineage2.2.1 None
DRR188539 Sensitive lineage2.2.1 None
SRR25515248 Pre-XDR-TB lineage2.2.1 None
SRR12420315 Sensitive lineage2.2.1 None
SRR1226201 Sensitive lineage2.2.1;lineage4.9 None
SRR1231613 Sensitive lineage2.2.1 None
SRR21277560 Sensitive lineage2.2.1 None
ERR4821190 Other lineage2.2.1 gb
SRR1214497 Sensitive lineage2.2.1 None
SRR1215501 Sensitive lineage2.2.1 None
SRR1218861 Sensitive lineage2.2.1 None
ERR552682 MDR-TB lineage4.8 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR10306009 MDR-TB lineage2.2.1 None
SRR21277236 Sensitive lineage2.2.1 None
ERR502930 MDR-TB lineage2.2.1 None
SRR1223529 Sensitive lineage2.2.1;lineage4.9 None
SRR15368989 MDR-TB lineage2.2.1 None
SRR6280222 Other lineage2.2.1 cn
DRR188549 Sensitive lineage2.2.1 None
ERR1213939 MDR-TB lineage2.2.1;lineage4.3.3 pe
DRR188468 Sensitive lineage2.2.1 None
SRR28045375 Sensitive lineage2.2.1 None
SRR6480517 Sensitive lineage2.2.1 None
SRR15369074 Sensitive lineage2.2.1 None
SRR21277314 Other lineage2.2.1 None
SRR1221668 Sensitive lineage2.2.1;lineage4.9 None
SRR1223020 Sensitive lineage2.2.1 None
SRR18002924 Other lineage2.2.1 None
SRR1232403 Sensitive lineage2.2.1;lineage4.9 None
SRR15369029 Sensitive lineage2.2.1 None
SRR21277841 MDR-TB lineage2.2.1 None
SRR1219265 Sensitive lineage2.2.1;lineage4.9 None
SRR21732284 HR-TB lineage2.2.1 None
SRR15723028 Sensitive lineage2.2.1 None
SRR10808602 Sensitive lineage2.2.1 None
SRR6280328 Other lineage2.2.1 cn
DRR188599 Sensitive lineage2.2.1 None
SRR21732427 HR-TB lineage2.2.1 None
SRR15723090 Sensitive lineage2.2.1 None
SRR15723301 Sensitive lineage2.2.1 None
ERR3132182 Sensitive lineage2.2.1 None
SRR15723015 RR-TB lineage2.2.1 None
SRR21277782 Sensitive lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR1224305 Sensitive lineage2.2.1 None
SAMN03246269 MDR-TB lineage2.2.1 cn
SRR1222223 Sensitive lineage2.2.1;lineage4.9 None
SRR21576538 MDR-TB lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR15316106 Sensitive lineage2.2.1 None
SRR21277866 MDR-TB lineage2.2.1 None
ERR4024880 Sensitive lineage2.2.1 None
SRR1219063 Sensitive lineage2.2.1 None
SRR25389428 HR-TB lineage2.2.1 None
SRR1220364 Sensitive lineage2.2.1;lineage4.9 None
SRR1225280 Sensitive lineage2.2.1 None
SRR21291125 Sensitive lineage2.2.1 None
ERR6866912 Sensitive lineage2.2.1 None
SRR10808786 Sensitive lineage2.2.1 None
ERR2020067 Other lineage2.2.1 None
SRR6280242 Other lineage2.2.1 cn
ERR4810871 Sensitive lineage2.2.1 cn
SRR1225803 Sensitive lineage2.2.1 None
SRR12420530 Sensitive lineage2.2.1 None
SRR1218902 Sensitive lineage2.2.1 None
DRR034428 Sensitive lineage2.2.1 None
SRR2024972 MDR-TB lineage2.2.1 cn
SRR18002907 MDR-TB lineage2.2.1 None
ERR552681_ERR552682 MDR-TB lineage4.8 None
SRR15368899 MDR-TB lineage2.2.1 None
SRR20969477 Pre-XDR-TB lineage2.2.1;lineage4.4.2 None
ERR2020069 Pre-XDR-TB lineage2.2.1 None
SRR1219987 Sensitive lineage2.2.1;lineage4.9 None
SRR20969387 Sensitive lineage2.2.1 None
SRR1223366 Sensitive lineage2.2.1 None
SRR1226262 Sensitive lineage2.2.1 None
ERR4812716 Sensitive lineage2.2.1 pe
SRR15315895 Sensitive lineage2.2.1 None
SRR1224951 Sensitive lineage2.2.1;lineage4.9 None
SRR1222277 Sensitive lineage2.2.1 None
ERR6866322 Sensitive lineage2.2.1 None
SRR21277657 Other lineage2.2.1 None
SRR21576584 MDR-TB lineage2.2.1 None
SRR15723163 Sensitive lineage2.2.1 None
DRR188476 Sensitive lineage2.2.1 None
SRR1229760 Sensitive lineage2.2.1 None
SRR21576670 MDR-TB lineage2.2.1 None
DRR188623 Sensitive lineage2.2.1 None
SRR1218985 Sensitive lineage2.2.1 None
SRR1214047 Sensitive lineage2.2.1 None
SRR1216243 Sensitive lineage2.2.1;lineage4.9 None
SRR18548951 RR-TB lineage2.2.1 None
SRR15315904 Sensitive lineage2.2.1 None
SRR21277864 Pre-XDR-TB lineage2.2.1 None
ERR234136 Sensitive lineage2.2.1 cn
SRR15315923 Sensitive lineage2.2.1 None
ERR11081021 Pre-XDR-TB lineage2.2.1 None
SRR21887723 Pre-XDR-TB lineage2.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR9125794 Sensitive lineage2.2.1 None
SRR25827820 Pre-XDR-TB lineage2.2.1;lineage4.2.2.2 None
ERR4811194 Sensitive lineage2.2.1 cn
ERR6865846 Sensitive lineage2.2.1 None
SRR21732499 Sensitive lineage2.2.1 None
SRR1231362 Sensitive lineage2.2.1;lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR9121721 Sensitive lineage2.2.1 None
DRR188577 Sensitive lineage2.2.1 None
SRR15723099 Sensitive lineage2.2.1 None
DRR188535 Sensitive lineage2.2.1 None
SRR1232114 Sensitive lineage2.2.1 None
SRR21864654 Sensitive lineage2.2.1 None
SRR18549001 Sensitive lineage2.2.1 None
SRR1222550 Sensitive lineage2.2.1;lineage4.9 None
SRR16370385 HR-TB lineage2.2.1 None
SRR21887655 Pre-XDR-TB lineage2.2.1 None
DRR473716 Sensitive lineage2.2.1 None
ERR4812598 Sensitive lineage2.2.1 pe
SRR1222801 Sensitive lineage2.2.1 None
SRR21277430 Other lineage2.2.1 None
SRR21576695 Pre-XDR-TB lineage2.2.1 None
SRR1232521 Sensitive lineage2.2.1;lineage4.9 None
SRR1231685 Sensitive lineage2.2.1;lineage4.9 None
SRR1230220 Sensitive lineage2.2.1 None
SRR1220968 Sensitive lineage2.2.1 None
ERR4822360 MDR-TB lineage2.2.1 None
ERR4810496 Sensitive lineage2.2.1 None
ERR6866129 Sensitive lineage2.2.1 None
SRR15316068 HR-TB lineage2.2.1 None
DRR189012 Sensitive lineage2.2.1 None
SRR6824500 MDR-TB lineage2.2.1 cn
DRR188710 Sensitive lineage2.2.1 None
SRR28394123 Sensitive lineage2.2.1 None
SRR28045922 Pre-XDR-TB lineage2.2.1 None
SRR8651656 Pre-XDR-TB lineage2.2.1 cn
SRR8651589 Pre-XDR-TB lineage2.2.1 cn
SRR8651620 RR-TB lineage2.2.1 cn
SRR15368897 Pre-XDR-TB lineage2.2.1 None
SRR1215649 Sensitive lineage2.2.1 None