Rv3794 - c.-15C>G


Drug resistance types
0 Sensitive 1 RR-TB 11 HR-TB 75 MDR-TB 68 Pre-XDR-TB 4 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.2.1 9
lineage4.2.1 14
lineage2.2.1 37
lineage2.2.2 8
lineage4.4.1.1 14
lineage5.1.2 1
lineage2.1 1
lineage2.2.1.1 12
lineage5.3 2
lineage4.1.1.3 4
lineage3 8
lineage4.2.2.2 3
lineage4.2.2.1 7
lineage1.2.2.2 1
lineage4.3.4.1 6
lineage4.3.3 2
lineage4.3.4.2 1
lineage6.2.2 3
lineage4.6.1.2 5
lineage4.3.4 1
lineage2.2 1
lineage5.1.1 1
lineage3.1.2 2
lineage4 1
lineage1.1.2 1
lineage2.2.1.2 1
lineage4.8;lineage2.2.1.1 1
lineage4.1.1 2
lineage3.1.1 2
5
lineage4.2.1;lineage2.2.1 1
lineage4.2.1;lineage4.1.2 1
lineage4.4.2 1
spoligotype Counts
spoligotype Count
None 159
Geographic prevalence
Country level data for this variant is available for 51 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14801609 HR-TB lineage4.1.2.1 None
SRR14807677 HR-TB lineage4.1.2.1 None
SRR14802045 HR-TB lineage4.1.2.1 None
SRR14802228 MDR-TB lineage4.2.1 None
SRR14807612 HR-TB lineage4.1.2.1 None
SRR22048323 Pre-XDR-TB lineage4.1.2.1 None
SRR11662213 Pre-XDR-TB lineage2.2.1 None
SRR18054793 Pre-XDR-TB lineage2.2.2 None
SRR18213771 Pre-XDR-TB lineage4.4.1.1 None
SRR18715441 MDR-TB lineage5.1.2 None
SRR25827298 Pre-XDR-TB lineage2.2.1 None
SRR25827401 Pre-XDR-TB lineage2.2.1 None
SRR21277576 MDR-TB lineage2.2.1 None
SRR21576579 MDR-TB lineage2.2.1 None
SRR15316367 MDR-TB lineage2.2.1 None
SRR15368867 MDR-TB lineage2.2.1 None
SRR15368914 MDR-TB lineage2.2.1 None
SRR19241813 MDR-TB lineage4.1.2.1 None
SRR25206917 Pre-XDR-TB lineage2.2.2 None
SRR21276934 MDR-TB lineage2.2.1 None
SRR21747071 MDR-TB lineage2.1 None
SRR22424755 Pre-XDR-TB lineage2.2.1 None
SRR22175230 Pre-XDR-TB lineage2.2.1.1 None
SRR22175240 Pre-XDR-TB lineage2.2.1.1 None
ERR11068991 MDR-TB lineage5.3 None
SRR22424822 Pre-XDR-TB lineage2.2.1 None
ERR1034603 Pre-XDR-TB lineage4.1.1.3 pk
SRR23938699 HR-TB lineage2.2.1 None
SRR27107235 HR-TB lineage4.1.2.1 None
SRR25534597 Pre-XDR-TB lineage2.2.1 None
SAMEA2534809 MDR-TB lineage2.2.1 de
ERR1034605 Pre-XDR-TB lineage3 pk
SRR3105804 Pre-XDR-TB lineage4.2.2.2 None
ERR2199914 Pre-XDR-TB lineage4.2.2.1 rs
SRR6824499 Pre-XDR-TB lineage2.2.1 cn
ERR2041766 MDR-TB lineage4.2.2.1 rs
ERR2041749 MDR-TB lineage4.2.2.1 rs
SRR6824435 MDR-TB lineage2.2.1.1 cn
ERR2041718 Pre-XDR-TB lineage4.2.2.1 rs
ERR2041759 MDR-TB lineage4.2.2.1 rs
ERR2041748 Pre-XDR-TB lineage4.2.2.1 rs
ERR2200093 Pre-XDR-TB lineage4.2.2.1 rs
SRR6824482 Pre-XDR-TB lineage2.2.2 cn
SRR3743434 Pre-XDR-TB lineage4.2.1 None
SRR6824623 MDR-TB lineage2.2.2 cn
SRR5341244 Pre-XDR-TB lineage1.2.2.2 in
ERR751650 Pre-XDR-TB lineage2.2.1 th
SRR5065371 Pre-XDR-TB lineage2.2.2 vn
ERR7910905 MDR-TB lineage4.2.1 md
ERR2864260 MDR-TB lineage4.3.4.1 pt
SRR5153810 HR-TB lineage4.3.3 None
ERR2706995 MDR-TB lineage4.3.4.2 cd
ERR553000 MDR-TB lineage6.2.2 None
ERR1199098 MDR-TB lineage4.6.1.2 cd
SAMEA2533937 MDR-TB lineage2.2.1 uz
ERR2707084 MDR-TB lineage4.6.1.2 cd
SRR2100392 Pre-XDR-TB lineage4.4.1.1 None
SRR7341668 MDR-TB lineage4.4.1.1 ro
ERR2653099 Pre-XDR-TB lineage4.3.4 None
SRR20969770 MDR-TB lineage2.2 None
ERR2653159 Pre-XDR-TB lineage4.3.4.1 None
SRR23310926 Pre-XDR-TB lineage4.2.1 None
SRR23310853 Pre-XDR-TB lineage4.2.1 None
SRR23311073 MDR-TB lineage4.2.1 None
SRR23310930 Pre-XDR-TB lineage4.2.1 None
ERR4822363 Pre-XDR-TB lineage2.2.1 None
ERR4827669 MDR-TB lineage2.2.1 None
ERR4827994 Pre-XDR-TB lineage2.2.1 None
SAMN02628506 MDR-TB lineage3 ir
ERR3170440 RR-TB lineage5.1.1 gh
ERR4799245 XDR-TB lineage2.2.1.1 in
ERR2517045 Pre-XDR-TB lineage4.4.1.1 gb
ERR4799086 MDR-TB lineage3.1.2 in
ERR4797902 XDR-TB lineage2.2.1.1 in
ERR2516599 MDR-TB lineage4 pe
ERR4797028 Pre-XDR-TB lineage1.1.2 in
ERR4798565 MDR-TB lineage3.1.2 in
ERR4799163 Pre-XDR-TB lineage4.2.2.2 in
SRR6511622 MDR-TB lineage4.3.4.1 None
ERR4799380 Pre-XDR-TB lineage2.2.1.1 in
ERR4811370 Pre-XDR-TB lineage2.2.1.2 cn
ERR4811536 Pre-XDR-TB lineage2.2.1 cn
SRR6930905 Pre-XDR-TB lineage2.2.1 None
ERR4799336 Pre-XDR-TB lineage4.2.2.2 in
ERR4800290 XDR-TB lineage4.8;lineage2.2.1.1 in
ERR4800353 XDR-TB lineage2.2.1.1 in
ERR3132077 HR-TB lineage2.2.2 None
ERR5917684 Pre-XDR-TB lineage2.2.1 by
ERR4799436 Pre-XDR-TB lineage2.2.1 in
ERR4800437 Pre-XDR-TB lineage2.2.1.1 in
ERR4872249 MDR-TB lineage4.1.1 None
DRR454969 MDR-TB lineage2.2.1.1 None
SRR8380043 Pre-XDR-TB lineage2.2.1 None
ERR2510478 Pre-XDR-TB lineage3 pk
SRR8366603 Pre-XDR-TB lineage2.2.1 None
ERR10680203 MDR-TB lineage6.2.2 None
ERR11798677 Pre-XDR-TB lineage4.2.1 None
ERR10680166 MDR-TB lineage6.2.2 None
ERR10680204 MDR-TB lineage4.1.2.1 None
DRR130063 Pre-XDR-TB lineage2.2.1 None
ERR11043261 MDR-TB lineage2.2.1.1 None
ERR10762351 MDR-TB lineage4.2.1 None
ERR10680215 MDR-TB lineage4.1.2.1 None
ERR11043054 Pre-XDR-TB lineage3 None
ERR11043737 MDR-TB lineage2.2.1 None
ERR3639810 MDR-TB lineage5.3 None
ERR114421 Pre-XDR-TB lineage4.4.1.1 None
ERR11798678 Pre-XDR-TB lineage4.2.1 None
ERR405195 MDR-TB lineage3.1.1 None
ERR2513352 Pre-XDR-TB lineage4.4.1.1 gb
ERR4553577 Pre-XDR-TB None
ERR405205 MDR-TB lineage4.4.1.1 None
ERR405207 MDR-TB lineage4.4.1.1 None
ERR4553582 MDR-TB None
ERR4809028 MDR-TB lineage4.2.1 za
ERR4553789 Pre-XDR-TB None
ERR227990 HR-TB lineage4.3.3 ru
ERR4809240 MDR-TB lineage4.2.1;lineage2.2.1 za
ERR4553792 MDR-TB None
ERR4553882 Pre-XDR-TB None
ERR4797852 Pre-XDR-TB lineage2.2.1.1 None
ERR2515868 MDR-TB lineage4.1.1.3 za
ERR4809241 MDR-TB lineage4.2.1;lineage4.1.2 za
ERR4809254 MDR-TB lineage2.2.1.1 za
ERR4831466 MDR-TB lineage4.1.1.3 None
ERR5866574 MDR-TB lineage2.2.1 None
ERR5865998 MDR-TB lineage2.2.1 None
ERR4800671 HR-TB lineage3 None
ERR5865999 MDR-TB lineage2.2.1 None
ERR5866573 MDR-TB lineage2.2.1 None
ERR6359000 MDR-TB lineage4.6.1.2 None
ERR5979434 MDR-TB lineage3.1.1 None
ERR6359129 MDR-TB lineage4.6.1.2 None
ERR6359103 MDR-TB lineage4.6.1.2 None
ERR9119641 MDR-TB lineage4.1.1 None
ERR688037 Pre-XDR-TB lineage3 None
ERR688035 Pre-XDR-TB lineage4.1.1.3 None
ERR7975640 MDR-TB lineage4.2.1 None
SRR25534517 Pre-XDR-TB lineage2.2.1 None
ERR9286005 MDR-TB lineage4.4.1.1 None
ERR9286003 MDR-TB lineage4.4.1.1 None
ERR9285997 MDR-TB lineage4.4.1.1 None
ERR9285998 MDR-TB lineage4.4.1.1 None
ERR9286028 Pre-XDR-TB lineage4.4.1.1 None
ERR9907794 MDR-TB lineage4.3.4.1 None
ERR9907694 MDR-TB lineage4.3.4.1 None
ERR9286063 MDR-TB lineage4.4.1.1 None
ERR9907797 MDR-TB lineage4.3.4.1 None
ERR9992794 Pre-XDR-TB lineage2.2.2 None
ERR9992798 HR-TB lineage2.2.2 None
SRR1173751 MDR-TB lineage3 None
SRR10379933 Pre-XDR-TB lineage4.2.1 None
SRR1173572 MDR-TB lineage3 None
SRR1173311 Pre-XDR-TB lineage2.2.1 None
SRR11662413 Pre-XDR-TB lineage2.2.1 None
SRR12072596 Pre-XDR-TB lineage2.2.1 None
SRR13232615 MDR-TB lineage2.2.1 None
SRR14782339 Pre-XDR-TB lineage4.2.1 None
SRR13423613 Pre-XDR-TB lineage4.4.2 None