Rv3794 - c.-8C>T


Drug resistance types
1 Sensitive 3 RR-TB 9 HR-TB 162 MDR-TB 84 Pre-XDR-TB 5 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.1.3 20
lineage4.3.3 15
lineage4.5 3
lineage2.2.1 77
lineage4.2.1 27
lineage4.2.2.1 22
lineage4.1.2.1 9
lineage4.2.2.2 1
lineage4.4.1.1 4
lineage3.1.1;lineage4 5
lineage4.3.4.2 6
lineage4.3.4.2.1 4
lineage4.3.2 4
lineage4.6.1.2 9
lineage3 17
1
lineage4.4.1 1
lineage2.2.2;lineage4.1.1.3 1
lineage5.2 3
lineage2.2.1;lineage4.3.3 1
lineage4.4.2 1
lineage4.9 1
lineage3.1.1 8
lineage2.2.1.1 2
lineage2.2.2 5
lineage2.2.1.2 2
lineage4.3.4 1
lineage1.1.2 2
lineage3.1.2.1 1
lineage4.1.1 1
lineage1.1.2;lineage2.2.1;lineage3.1 1
lineage1.2.1.2 1
lineage6.3.3 1
lineage4.3 1
lineage4.3.4.1 1
lineage4.3.2.1 2
lineage1.2.2.1;lineage2.2.1.1 1
lineage2.2.1;lineage4.2.1 1
lineage4.6.3 1
spoligotype Counts
spoligotype Count
None 264
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1873446 Pre-XDR-TB lineage4.1.1.3 None
ERR5865791 MDR-TB lineage4.3.3 None
SRR10040148 MDR-TB lineage4.5 None
SRR12142348 MDR-TB lineage2.2.1 None
ERR8025664 Pre-XDR-TB lineage4.1.1.3 None
SRR6484982 MDR-TB lineage2.2.1 None
SRR3743408 Pre-XDR-TB lineage4.2.1 None
ERR2041689 MDR-TB lineage4.2.2.1 rs
SRR21887691 Pre-XDR-TB lineage2.2.1 None
ERR2041796 MDR-TB lineage4.2.2.1 rs
ERR2516698 Pre-XDR-TB lineage4.1.2.1 pe
ERR2516904 MDR-TB lineage4.2.2.2 gb
SAMEA2533548 MDR-TB lineage4.4.1.1 uz
ERR13290380 MDR-TB lineage3.1.1;lineage4 None
ERR2041756 MDR-TB lineage4.2.2.1 rs
SRR15315983 MDR-TB lineage2.2.1 None
SRR21276917 MDR-TB lineage2.2.1 None
SRR14801652 HR-TB lineage4.3.3 None
ERR2041795 MDR-TB lineage4.2.2.1 rs
SRR28393940 RR-TB lineage4.1.1.3 None
SRR29093188 RR-TB lineage4.1.1.3 None
SRR16087920 MDR-TB lineage4.3.3 None
ERR550838_ERR550837 MDR-TB lineage2.2.1 None
SRR11348147 MDR-TB lineage4.3.4.2 None
SRR10869284 Pre-XDR-TB lineage4.1.1.3 None
ERR502890 MDR-TB lineage2.2.1 None
ERR2707190 MDR-TB lineage4.3.4.2.1 cd
ERR1035277 Pre-XDR-TB lineage4.3.2 br
ERR550897 MDR-TB lineage4.4.1.1 None
ERR6358829 MDR-TB lineage4.6.1.2 None
SRR5341363 Pre-XDR-TB lineage3 in
ERR4553852 Sensitive None
ERR2510451 Pre-XDR-TB lineage3 pk
ERR3335778 Pre-XDR-TB lineage3 pk
ERR1035311 MDR-TB lineage4.4.1 br
SRR8651556 Pre-XDR-TB lineage2.2.1 cn
ERR13286205 Pre-XDR-TB lineage4.1.1.3 None
ERR13289008 Pre-XDR-TB lineage2.2.2;lineage4.1.1.3 None
SRR29539306 Pre-XDR-TB lineage4.3.3 None
SRR29539207 MDR-TB lineage4.3.3 None
ERR4811334 Pre-XDR-TB lineage2.2.1 cn
SRR1144734 MDR-TB lineage3.1.1;lineage4 None
SRR1723793 MDR-TB lineage2.2.1 cn
SRR29055913 MDR-TB lineage2.2.1 None
ERR2041734 MDR-TB lineage4.2.2.1 rs
SRR3105796 Pre-XDR-TB lineage3 None
ERR983228 MDR-TB lineage2.2.1 None
SRR1166315 MDR-TB lineage4.2.1 None
ERR2706930 MDR-TB lineage5.2 cd
SRR28351392 MDR-TB lineage4.3.3 None
ERR108512 MDR-TB lineage2.2.1;lineage4.3.3 ru
ERR2041737 MDR-TB lineage4.2.2.1 None
ERR9120011 MDR-TB lineage2.2.1 None
ERR8665827 Pre-XDR-TB lineage2.2.1 None
ERR8774435 MDR-TB lineage4.3.4.2.1 None
SRR29539791 MDR-TB lineage4.3.3 None
ERR551727 MDR-TB lineage2.2.1 None
SRR29772443 MDR-TB lineage3 None
SRR671868 MDR-TB lineage4.5 cn
ERR4797545 Pre-XDR-TB lineage2.2.1 in
SRR26937022 MDR-TB lineage2.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
ERR987772 HR-TB lineage4.9 None
ERR405204 MDR-TB lineage3.1.1 None
SRR21276941 Pre-XDR-TB lineage2.2.1 None
ERR10762467 Pre-XDR-TB lineage4.2.1 None
SRR3724799 MDR-TB lineage4.3.4.2.1 cd
SRR1169022 Pre-XDR-TB lineage4.2.1 None
SRR1169011 MDR-TB lineage4.2.1 None
ERR11775734 MDR-TB lineage2.2.1 None
ERR7737653 MDR-TB lineage3 None
ERR4553424 RR-TB lineage2.2.1 None
ERR1034615 Pre-XDR-TB lineage3 pk
ERR2041738 MDR-TB lineage4.2.2.1 rs
SRR15014681 MDR-TB lineage4.3.4.2 None
ERR10748202 MDR-TB lineage2.2.1.1 None
ERR2515475 Pre-XDR-TB lineage4.1.1.3 za
ERR1035344 MDR-TB lineage4.3.2 br
SRR2100419 Pre-XDR-TB lineage2.2.1 None
ERR868538 MDR-TB lineage4.2.2.1 None
ERR551726_ERR551727 MDR-TB lineage2.2.1 None
ERR2516597 XDR-TB lineage4.1.2.1 pe
SRR25207353 Pre-XDR-TB lineage2.2.2 None
SRR10869203 Pre-XDR-TB lineage4.1.1.3 None
ERR2653117 Pre-XDR-TB lineage4.3.4.2 None
ERR11069059 Pre-XDR-TB lineage2.2.1.2 None
SRR25207198 Pre-XDR-TB lineage2.2.2 None
ERR11068479 Pre-XDR-TB lineage2.2.1 None
ERR2041777 MDR-TB lineage4.2.2.1 rs
ERR10748452 MDR-TB lineage2.2.1 None
ERR9120010 MDR-TB lineage2.2.1 None
ERR3287608 HR-TB lineage4.1.2.1 None
SRR29093245 Pre-XDR-TB lineage4.1.1.3 None
ERR13288959 MDR-TB lineage4.1.1.3 None
ERR10748424 MDR-TB lineage4.1.1.3 None
ERR2041723 Pre-XDR-TB lineage4.2.2.1 rs
ERR9993009 XDR-TB lineage4.1.1.3 None
SRR7755680 Pre-XDR-TB lineage4.2.1 None
SRR1166261 MDR-TB lineage4.2.1 None
SRR1166300 MDR-TB lineage4.2.1 None
ERR13284994 Pre-XDR-TB lineage2.2.1.2 None
ERR11082810 MDR-TB lineage4.2.2.1 None
SRR28240213 MDR-TB lineage4.3.3 None
SRR11972430 MDR-TB lineage2.2.1 None
SRR28706697 MDR-TB lineage2.2.1 None
ERR1952141 Pre-XDR-TB lineage2.2.1 ie
SRR20632810 Pre-XDR-TB lineage2.2.1 None
SRR21690032 HR-TB lineage4.3.3 None
ERR9992753 XDR-TB lineage4.1.1.3 None
SRR29093191 Pre-XDR-TB lineage4.1.1.3 None
SRR28393353 MDR-TB lineage4.3.2 None
ERR9907706 MDR-TB lineage4.3.4 None
ERR1034616 Pre-XDR-TB lineage3 pk
SRR29093183 Pre-XDR-TB lineage4.1.1.3 None
SRR25207302 MDR-TB lineage4.5 None
ERR5987218 MDR-TB lineage2.2.1 None
SRR10380213 MDR-TB lineage4.2.1 None
SRR29772602 Pre-XDR-TB lineage1.1.2 None
ERR2510524 MDR-TB lineage3 pk
SRR15368978 MDR-TB lineage2.2.1 None
ERR158606 MDR-TB lineage2.2.1 gb
SRR22251593 MDR-TB lineage2.2.1 None
ERR4796605 MDR-TB lineage3.1.2.1 in
ERR4797326 MDR-TB lineage2.2.1 in
ERR4811328 Pre-XDR-TB lineage2.2.2 cn
SRR15723130 HR-TB lineage2.2.1 None
ERR2516523 MDR-TB lineage4.1.1 pe
ERR4810851 Pre-XDR-TB lineage2.2.2 cn
SRR25827550 XDR-TB lineage1.1.2;lineage2.2.1;lineage3.1 None
ERR4828852 MDR-TB lineage4.3.3 None
SRR6824465 MDR-TB lineage2.2.1 cn
ERR550838 MDR-TB lineage2.2.1 None
ERR2041798 MDR-TB lineage4.2.2.1 rs
ERR5865792 MDR-TB lineage4.3.3 None
SRR29231703 MDR-TB lineage5.2 None
ERR1035350 MDR-TB lineage4.3.2 br
SAMEA2533511 MDR-TB lineage2.2.1 uz
SAMN02584640 MDR-TB lineage4.2.1 md
SAMEA2534150 MDR-TB lineage2.2.1 uz
ERR3148194 MDR-TB lineage1.2.1.2 mx
SRR1146360 MDR-TB lineage3.1.1 None
ERR2041763 MDR-TB lineage4.2.2.1 rs
ERR2307748 Pre-XDR-TB lineage2.2.1 None
SRR7646049 Pre-XDR-TB lineage4.2.1 None
ERR2041709 MDR-TB lineage4.2.2.1 rs
ERR553107 MDR-TB lineage2.2.1 in
SRR6256976 Pre-XDR-TB lineage4.2.1 ru
SRR16088478 MDR-TB lineage4.2.1 None
ERR10680188 MDR-TB lineage6.3.3 None
ERR2516775 MDR-TB lineage2.2.1 gb
ERR1034587 Pre-XDR-TB lineage3 pk
SRR14801551 HR-TB lineage4.2.1 None
ERR9119799 MDR-TB lineage2.2.1 None
ERR5987436 MDR-TB lineage2.2.1 None
ERR6359020 MDR-TB lineage4.6.1.2 None
ERR13290378 MDR-TB lineage3.1.1;lineage4 None
SRR15364444 Pre-XDR-TB lineage2.2.1 None
SRR6353871 MDR-TB lineage2.2.1 None
ERR10748333 MDR-TB lineage2.2.1 None
SRR29539259 MDR-TB lineage4.3.3 None
ERR2041797 MDR-TB lineage4.2.2.1 None
SRR21887668 Pre-XDR-TB lineage2.2.1 None
ERR688047 Pre-XDR-TB lineage3 None
ERR4799543 Pre-XDR-TB lineage4.3 None
ERR10748497 MDR-TB lineage2.2.1 None
ERR6358734 MDR-TB lineage4.6.1.2 None
ERR2041791 MDR-TB lineage4.2.2.1 rs
ERR9119717 MDR-TB lineage2.2.1 None
SRR10040192 MDR-TB lineage2.2.1 None
ERR550897_ERR550896 MDR-TB lineage4.4.1.1 None
ERR6358931 MDR-TB lineage4.6.1.2 None
SRR6831901 Pre-XDR-TB lineage2.2.1 None
SRR6831995 MDR-TB lineage2.2.1 None
SRR25207281 Pre-XDR-TB lineage2.2.1 None
SRR998857 Pre-XDR-TB lineage4.2.1 None
ERR2041790 MDR-TB lineage4.2.2.1 None
SRR7645866 Pre-XDR-TB lineage4.2.1 None
ERR4829820 Pre-XDR-TB lineage4.2.1 it
ERR6358994 MDR-TB lineage4.6.1.2 None
ERR11138608 Pre-XDR-TB lineage2.2.1 None
SRR29056305 Pre-XDR-TB lineage4.1.1.3 None
SRR21277853 MDR-TB lineage2.2.1 None
ERR4813878 MDR-TB lineage4.3.4.1 br
SRR6832296 HR-TB lineage4.2.1 None
ERR11068339 Pre-XDR-TB lineage2.2.1 None
ERR13289362 MDR-TB lineage4.3.2.1 None
ERR6358770 MDR-TB lineage4.6.1.2 None
ERR6359012 MDR-TB lineage4.6.1.2 None
ERR4827803 MDR-TB lineage2.2.1 None
ERR2516405 Pre-XDR-TB lineage4.1.2.1 pe
ERR2041712 MDR-TB lineage4.2.2.1 rs
SAMN02414894 MDR-TB lineage3.1.1 se
ERR550896 MDR-TB lineage4.4.1.1 None
SRR1163215 MDR-TB lineage3.1.1 None
SRR1169165 MDR-TB lineage4.2.1 None
ERR10748243 MDR-TB lineage1.2.2.1;lineage2.2.1.1 None
ERR3335782 Pre-XDR-TB lineage3 pk
ERR2516769 MDR-TB lineage2.2.1 gb
ERR9286000 MDR-TB lineage3.1.1 None
SRR21887690 XDR-TB lineage2.2.1 None
ERR2510711 Pre-XDR-TB lineage4.2.1 it
ERR2041785 Pre-XDR-TB lineage4.2.2.1 rs
SRR24255997 MDR-TB lineage4.3.3 None
SRR24114352 Pre-XDR-TB lineage3 None
SRR28393334 MDR-TB lineage4.1.2.1 None
ERR2517112 Pre-XDR-TB lineage2.2.1 gb
SAMN02584589 MDR-TB lineage4.2.1 md
ERR3794362 MDR-TB lineage2.2.1;lineage4.2.1 None
SRR26937090 MDR-TB lineage2.2.1 None
SRR28498580 Pre-XDR-TB lineage4.2.1 None
ERR13260066 MDR-TB lineage1.1.2 None
SRR27332324 MDR-TB lineage4.6.3 None
SRR6458406 Pre-XDR-TB lineage2.2.1 None
SRR30180339 Pre-XDR-TB lineage2.2.1 None
ERR2041753 MDR-TB lineage4.2.2.1 rs
SRR29274165 Pre-XDR-TB lineage4.1.2.1 None
SRR1166082 Pre-XDR-TB lineage4.2.1 None
ERR11067760 Pre-XDR-TB lineage2.2.1 None
ERR9806988 Pre-XDR-TB lineage4.1.1.3 None
ERR2516451 MDR-TB lineage4.1.2.1 pe
ERR1023303 MDR-TB lineage3.1.1 None
ERR2600530 MDR-TB lineage2.2.1 None
SRR24709873 MDR-TB lineage2.2.1 None
ERR10748252 MDR-TB lineage2.2.1.1 None
SRR28394029 MDR-TB lineage4.1.2.1 None
ERR4423738 MDR-TB lineage4.3.4.2.1 None
ERR4799873 Pre-XDR-TB lineage2.2.1 in
SRR1169083 MDR-TB lineage4.2.1 None
ERR2041746 MDR-TB lineage4.2.2.1 rs
SRR21576725 MDR-TB lineage2.2.1 None
ERR4798286 Pre-XDR-TB lineage2.2.1 in
ERR1873550 Pre-XDR-TB lineage4.1.1.3 za
ERR688048 Pre-XDR-TB lineage3 None
ERR2041688 MDR-TB lineage4.2.2.1 rs
ERR551726 MDR-TB lineage2.2.1 None
SRR6824285 MDR-TB lineage2.2.1 cn
ERR6359049 MDR-TB lineage4.6.1.2 None
ERR688019 Pre-XDR-TB lineage3 None
SRR11348141 MDR-TB lineage4.3.4.2 None
SRR29096852 Pre-XDR-TB lineage4.1.1.3 None
ERR2307743 MDR-TB lineage2.2.1 None
SRR11348143 MDR-TB lineage4.3.4.2 None
SRR27069381 Pre-XDR-TB lineage2.2.2 None
ERR11798760 MDR-TB lineage4.2.1 None
ERR4829094 Pre-XDR-TB lineage3.1.1 dj
SAMN02584611 MDR-TB lineage4.2.1 md
ERR2516746 MDR-TB lineage3 gb
SRR12420679 MDR-TB lineage2.2.1 None
ERR2706914 MDR-TB lineage5.2 cd
ERR6362477 MDR-TB lineage2.2.1 None
ERR13290381 MDR-TB lineage3.1.1;lineage4 None
ERR6358799 MDR-TB lineage4.6.1.2 None
SRR15014781 MDR-TB lineage4.3.4.2 None
ERR11044426 HR-TB lineage4.3.3 None
ERR13290379 MDR-TB lineage3.1.1;lineage4 None
SRR1163359 MDR-TB lineage3.1.1 None
ERR3335765 Pre-XDR-TB lineage3 pk
ERR5865899 MDR-TB lineage2.2.1 None
SRR25207349 Pre-XDR-TB lineage2.2.1 None
SRR28393386 MDR-TB lineage4.1.2.1 None
SRR29056327 Pre-XDR-TB lineage4.1.1.3 None
SRR26331646 MDR-TB lineage4.3.2.1 None
SRR6832514 HR-TB lineage4.2.1 None
ERR2653083 Pre-XDR-TB lineage4.3.3 None