ERR1873446
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR5865791
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10040148
|
MDR-TB
|
lineage4.5
|
None
|
SRR12142348
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8025664
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR6484982
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3743408
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR2041689
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
SRR21887691
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2041796
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR2516698
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
ERR2516904
|
MDR-TB
|
lineage4.2.2.2
|
gb
|
SAMEA2533548
|
MDR-TB
|
lineage4.4.1.1
|
uz
|
ERR13290380
|
MDR-TB
|
lineage3.1.1;lineage4
|
None
|
ERR2041756
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
SRR15315983
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21276917
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801652
|
HR-TB
|
lineage4.3.3
|
None
|
ERR2041795
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
SRR28393940
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR29093188
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR16087920
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR550838_ERR550837
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11348147
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR10869284
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR502890
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2707190
|
MDR-TB
|
lineage4.3.4.2.1
|
cd
|
ERR1035277
|
Pre-XDR-TB
|
lineage4.3.2
|
br
|
ERR550897
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR6358829
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR5341363
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR4553852
|
Sensitive
|
|
None
|
ERR2510451
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR3335778
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR1035311
|
MDR-TB
|
lineage4.4.1
|
br
|
SRR8651556
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR13286205
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR13289008
|
Pre-XDR-TB
|
lineage2.2.2;lineage4.1.1.3
|
None
|
SRR29539306
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29539207
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811334
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR1144734
|
MDR-TB
|
lineage3.1.1;lineage4
|
None
|
SRR1723793
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR29055913
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2041734
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
SRR3105796
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR983228
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1166315
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR2706930
|
MDR-TB
|
lineage5.2
|
cd
|
SRR28351392
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR108512
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
ru
|
ERR2041737
|
MDR-TB
|
lineage4.2.2.1
|
None
|
ERR9120011
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665827
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8774435
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR29539791
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR551727
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29772443
|
MDR-TB
|
lineage3
|
None
|
SRR671868
|
MDR-TB
|
lineage4.5
|
cn
|
ERR4797545
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR26937022
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18003013
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
ERR987772
|
HR-TB
|
lineage4.9
|
None
|
ERR405204
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR21276941
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10762467
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR3724799
|
MDR-TB
|
lineage4.3.4.2.1
|
cd
|
SRR1169022
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR1169011
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR11775734
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7737653
|
MDR-TB
|
lineage3
|
None
|
ERR4553424
|
RR-TB
|
lineage2.2.1
|
None
|
ERR1034615
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR2041738
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
SRR15014681
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR10748202
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR2515475
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR1035344
|
MDR-TB
|
lineage4.3.2
|
br
|
SRR2100419
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR868538
|
MDR-TB
|
lineage4.2.2.1
|
None
|
ERR551726_ERR551727
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516597
|
XDR-TB
|
lineage4.1.2.1
|
pe
|
SRR25207353
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR10869203
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR2653117
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR11069059
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR25207198
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR11068479
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2041777
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR10748452
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9120010
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3287608
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR29093245
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR13288959
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR10748424
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR2041723
|
Pre-XDR-TB
|
lineage4.2.2.1
|
rs
|
ERR9993009
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR7755680
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR1166261
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR1166300
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR13284994
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR11082810
|
MDR-TB
|
lineage4.2.2.1
|
None
|
SRR28240213
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR11972430
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28706697
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1952141
|
Pre-XDR-TB
|
lineage2.2.1
|
ie
|
SRR20632810
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21690032
|
HR-TB
|
lineage4.3.3
|
None
|
ERR9992753
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093191
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28393353
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR9907706
|
MDR-TB
|
lineage4.3.4
|
None
|
ERR1034616
|
Pre-XDR-TB
|
lineage3
|
pk
|
SRR29093183
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR25207302
|
MDR-TB
|
lineage4.5
|
None
|
ERR5987218
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10380213
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR29772602
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
ERR2510524
|
MDR-TB
|
lineage3
|
pk
|
SRR15368978
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR158606
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR22251593
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796605
|
MDR-TB
|
lineage3.1.2.1
|
in
|
ERR4797326
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4811328
|
Pre-XDR-TB
|
lineage2.2.2
|
cn
|
SRR15723130
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2516523
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4810851
|
Pre-XDR-TB
|
lineage2.2.2
|
cn
|
SRR25827550
|
XDR-TB
|
lineage1.1.2;lineage2.2.1;lineage3.1
|
None
|
ERR4828852
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6824465
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR550838
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2041798
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR5865792
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29231703
|
MDR-TB
|
lineage5.2
|
None
|
ERR1035350
|
MDR-TB
|
lineage4.3.2
|
br
|
SAMEA2533511
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMN02584640
|
MDR-TB
|
lineage4.2.1
|
md
|
SAMEA2534150
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR3148194
|
MDR-TB
|
lineage1.2.1.2
|
mx
|
SRR1146360
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR2041763
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR2307748
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7646049
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR2041709
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR553107
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR6256976
|
Pre-XDR-TB
|
lineage4.2.1
|
ru
|
SRR16088478
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR10680188
|
MDR-TB
|
lineage6.3.3
|
None
|
ERR2516775
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR1034587
|
Pre-XDR-TB
|
lineage3
|
pk
|
SRR14801551
|
HR-TB
|
lineage4.2.1
|
None
|
ERR9119799
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5987436
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6359020
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR13290378
|
MDR-TB
|
lineage3.1.1;lineage4
|
None
|
SRR15364444
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6353871
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10748333
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29539259
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2041797
|
MDR-TB
|
lineage4.2.2.1
|
None
|
SRR21887668
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR688047
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4799543
|
Pre-XDR-TB
|
lineage4.3
|
None
|
ERR10748497
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6358734
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR2041791
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR9119717
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10040192
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR550897_ERR550896
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR6358931
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR6831901
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6831995
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207281
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR998857
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR2041790
|
MDR-TB
|
lineage4.2.2.1
|
None
|
SRR7645866
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR4829820
|
Pre-XDR-TB
|
lineage4.2.1
|
it
|
ERR6358994
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR11138608
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29056305
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR21277853
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813878
|
MDR-TB
|
lineage4.3.4.1
|
br
|
SRR6832296
|
HR-TB
|
lineage4.2.1
|
None
|
ERR11068339
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13289362
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR6358770
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6359012
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4827803
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516405
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
ERR2041712
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
SAMN02414894
|
MDR-TB
|
lineage3.1.1
|
se
|
ERR550896
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1163215
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR1169165
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR10748243
|
MDR-TB
|
lineage1.2.2.1;lineage2.2.1.1
|
None
|
ERR3335782
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR2516769
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR9286000
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR21887690
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR2510711
|
Pre-XDR-TB
|
lineage4.2.1
|
it
|
ERR2041785
|
Pre-XDR-TB
|
lineage4.2.2.1
|
rs
|
SRR24255997
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR24114352
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28393334
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2517112
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
SAMN02584589
|
MDR-TB
|
lineage4.2.1
|
md
|
ERR3794362
|
MDR-TB
|
lineage2.2.1;lineage4.2.1
|
None
|
SRR26937090
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28498580
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR13260066
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR27332324
|
MDR-TB
|
lineage4.6.3
|
None
|
SRR6458406
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR30180339
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2041753
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
SRR29274165
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1166082
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR11067760
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9806988
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR2516451
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR1023303
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR2600530
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24709873
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10748252
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR28394029
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4423738
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4799873
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR1169083
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR2041746
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
SRR21576725
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798286
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR1873550
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR688048
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR2041688
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR551726
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6824285
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR6359049
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR688019
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR11348141
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29096852
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR2307743
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11348143
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR27069381
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR11798760
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4829094
|
Pre-XDR-TB
|
lineage3.1.1
|
dj
|
SAMN02584611
|
MDR-TB
|
lineage4.2.1
|
md
|
ERR2516746
|
MDR-TB
|
lineage3
|
gb
|
SRR12420679
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2706914
|
MDR-TB
|
lineage5.2
|
cd
|
ERR6362477
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290381
|
MDR-TB
|
lineage3.1.1;lineage4
|
None
|
ERR6358799
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR15014781
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11044426
|
HR-TB
|
lineage4.3.3
|
None
|
ERR13290379
|
MDR-TB
|
lineage3.1.1;lineage4
|
None
|
SRR1163359
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR3335765
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR5865899
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207349
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28393386
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR29056327
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR26331646
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR6832514
|
HR-TB
|
lineage4.2.1
|
None
|
ERR2653083
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|