SRR27450289
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733213
|
Sensitive
|
lineage4.8
|
None
|
SRR24256022
|
Sensitive
|
lineage4.1.2
|
None
|
SRR25827523
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28868751
|
Sensitive
|
lineage3
|
None
|
SRR27450333
|
Sensitive
|
lineage4.3.1
|
None
|
SRR25827496
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR10748294
|
MDR-TB
|
lineage4.9
|
None
|
SRR27450536
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27450012
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR26558642
|
HR-TB
|
lineage2.1
|
None
|
SRR27450142
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
DRR473810
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28860088
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28860165
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868614
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR28868684
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450597
|
Sensitive
|
lineage4.3.1
|
None
|
SRR21733214
|
Sensitive
|
lineage3
|
None
|
SRR24710166
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24466754
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR21733267
|
HR-TB
|
lineage2.2.1
|
None
|
SRR21732959
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR25827495
|
MDR-TB
|
lineage1.1.2;lineage2.2.1
|
None
|
SRR27450334
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827565
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1
|
None
|
SRR28860097
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR25827455
|
Pre-XDR-TB
|
lineage1.1.2;lineage2.2.1
|
None
|
SRR25827508
|
Sensitive
|
lineage3
|
None
|
SRR25827556
|
Sensitive
|
lineage4.8
|
None
|
SRR25827635
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3
|
None
|
SRR28868848
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16088099
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR24709905
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827505
|
Sensitive
|
lineage3
|
None
|
SRR27450174
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25827745
|
Pre-XDR-TB
|
lineage2.2.1;lineage3.1.2.1
|
None
|
SRR21733358
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827399
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR28868370
|
HR-TB
|
lineage1.1.2
|
None
|
SRR28868766
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859996
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28868578
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28860205
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR28868845
|
Sensitive
|
lineage2.1
|
None
|
SRR24710117
|
HR-TB
|
lineage2.2.1
|
None
|
SRR25827470
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR25827736
|
XDR-TB
|
lineage3
|
None
|
SRR21732962
|
Other
|
lineage3
|
None
|
SRR27450391
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28859997
|
Sensitive
|
lineage4.8
|
None
|
SRR28868366
|
Sensitive
|
lineage4.8
|
None
|
SRR25827714
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25827445
|
MDR-TB
|
lineage1.1.2;lineage3
|
None
|
SRR25827648
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR25827698
|
HR-TB
|
lineage3
|
None
|
SRR21733271
|
Sensitive
|
lineage4.5
|
None
|
SRR25827465
|
Sensitive
|
lineage2.2.1.1;lineage3.1.2
|
None
|
SRR27450432
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827512
|
MDR-TB
|
lineage3
|
None
|
SRR26112017
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21732961
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR27450529
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16088209
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21732756
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR27450547
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827740
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3;lineage4
|
None
|
SRR28868538
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR21732848
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868360
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR21733268
|
Other
|
lineage3
|
None
|
SRR28860184
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28860001
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR27450100
|
Sensitive
|
lineage4.3.3
|
None
|
SRR25827811
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR23862189
|
Sensitive
|
lineage4.3.3
|
None
|
SRR24710084
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR473894
|
HR-TB
|
lineage2.2.1
|
None
|
SRR25827494
|
Sensitive
|
lineage1.1.3
|
None
|
SRR21733126
|
Sensitive
|
lineage1.1.1
|
None
|
SRR21733356
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR27450433
|
Sensitive
|
lineage3
|
None
|
SRR28868700
|
HR-TB
|
lineage3
|
None
|
SRR28868717
|
HR-TB
|
lineage1.1.1
|
None
|
SRR28858425
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR28858662
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868771
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR27450144
|
Sensitive
|
lineage3
|
None
|
SRR27450013
|
Sensitive
|
lineage1.1.2
|
None
|
SRR16088019
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827436
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28860111
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR27450416
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25827655
|
RR-TB
|
lineage1.1.2
|
None
|
ERR11488627
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR24256248
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21732373
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR21732799
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR27450173
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR21733345
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR24710155
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28868483
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR27450189
|
Sensitive
|
lineage3
|
None
|
SRR28868896
|
Sensitive
|
lineage3
|
None
|
SRR28859808
|
Other
|
lineage1.2.1.2
|
None
|
SRR28859937
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28859992
|
Sensitive
|
lineage2.2.2
|
None
|
SRR27450286
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827764
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827760
|
MDR-TB
|
lineage1.1.2;lineage2.2.1;lineage3
|
None
|
SRR27450019
|
Sensitive
|
lineage3
|
None
|
SRR26111916
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR22251379
|
Sensitive
|
lineage4.3.3
|
None
|
SRR26112732
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25827859
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26112031
|
HR-TB
|
lineage1.1.1
|
None
|
SRR28868653
|
HR-TB
|
lineage3
|
None
|
SRR25827305
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827750
|
Sensitive
|
lineage1.1.3
|
None
|
SRR28860057
|
Other
|
lineage2.2.1
|
None
|
SRR27450589
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR24255975
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21733211
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR16088026
|
Sensitive
|
lineage4.8
|
None
|
SRR22251143
|
Sensitive
|
lineage1.1.2
|
None
|
SRR26112229
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR27450143
|
Sensitive
|
lineage3
|
None
|
SRR27450187
|
Other
|
lineage2.2.1
|
None
|
SRR28868740
|
Sensitive
|
lineage3
|
None
|
SRR28858465
|
RR-TB
|
lineage3
|
None
|
SRR28859952
|
Sensitive
|
lineage4.8
|
None
|
SRR28860194
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28868376
|
HR-TB
|
La1.2.BCG
|
None
|
SRR28868695
|
Sensitive
|
lineage3
|
None
|
SRR27450287
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR29440953
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450593
|
Sensitive
|
lineage4.3.2
|
None
|
SRR22251114
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR22251377
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827378
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28858477
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28868529
|
Sensitive
|
lineage3
|
None
|
SRR21732815
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868907
|
Sensitive
|
lineage4.8
|
None
|
SRR28858428
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR25827852
|
XDR-TB
|
lineage3
|
None
|
SRR25827466
|
Sensitive
|
lineage3
|
None
|
SRR28860067
|
Sensitive
|
lineage4.8
|
None
|
SRR25827483
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28868361
|
Sensitive
|
lineage3
|
None
|
SRR21733278
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR21733352
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28859648
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR28868625
|
Sensitive
|
lineage2.2.2
|
None
|
SRR28860066
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868610
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR28868646
|
Sensitive
|
lineage4.5
|
None
|
SRR28868598
|
Other
|
lineage1.2.2.2
|
None
|
SRR27450009
|
Sensitive
|
lineage4.8
|
None
|
SRR27450420
|
Sensitive
|
lineage4.4.2
|
None
|
SRR24710252
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827502
|
Pre-XDR-TB
|
lineage2.2.1;lineage3.1.2.1
|
None
|
SRR25827651
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR25827652
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3;lineage4.1.1.1
|
None
|
SRR28868457
|
Other
|
lineage4.4
|
None
|
SRR28868591
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868620
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR28859986
|
Sensitive
|
lineage4.5
|
None
|
SRR28868600
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868743
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868770
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16088139
|
Sensitive
|
lineage4.2.1.1
|
None
|
SRR26558639
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28859999
|
Sensitive
|
lineage4.1.4
|
None
|
SRR28860120
|
RR-TB
|
lineage4.1.1
|
None
|
SRR28868500
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868844
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28868478
|
Sensitive
|
lineage4.8
|
None
|
SRR21732837
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28859843
|
Other
|
lineage2.2.1
|
None
|
SRR28868585
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR28868843
|
Other
|
lineage3
|
None
|
SRR24710068
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733190
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR24256057
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22251383
|
Sensitive
|
lineage4.8
|
None
|
SRR16088201
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28859646
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859885
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR28860197
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28868514
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28868593
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28860003
|
Sensitive
|
lineage4.8
|
None
|
SRR28868422
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868493
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28859928
|
Sensitive
|
La3
|
None
|
SRR28868526
|
Sensitive
|
lineage1.1.3
|
None
|
SRR28868596
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR21733350
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR27450338
|
Sensitive
|
lineage1.1.3
|
None
|
SRR24710078
|
Sensitive
|
lineage4.8
|
None
|
SRR24710087
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28868595
|
Sensitive
|
lineage3
|
None
|
SRR28868736
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28858475
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28859923
|
Sensitive
|
lineage3
|
None
|
SRR28868344
|
Sensitive
|
lineage1.1.1
|
None
|
SRR28868459
|
Sensitive
|
lineage4.4.2
|
None
|
SRR28868509
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28868606
|
Other
|
lineage2.2.1
|
None
|
SRR28868601
|
Other
|
lineage1.1.1.1
|
None
|
SRR28860056
|
HR-TB
|
lineage4.5
|
None
|
SRR28860006
|
Sensitive
|
lineage6.2.2
|
None
|
SRR25827451
|
Sensitive
|
lineage3;lineage4.8
|
None
|
SRR28868617
|
Sensitive
|
lineage4.5
|
None
|
SRR21733153
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR22251132
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR27450577
|
Sensitive
|
lineage4.5
|
None
|
SRR25827715
|
Other
|
lineage3;lineage4.8
|
None
|
SRR21732777
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR28868778
|
Sensitive
|
lineage1.1.2
|
None
|
SRR21732810
|
Sensitive
|
lineage1.1.2
|
None
|
SRR21732755
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27449965
|
Sensitive
|
lineage4.2.2.2
|
None
|
SRR21732375
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR27450422
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR25827640
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28868484
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28868623
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868658
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868746
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28859809
|
Sensitive
|
lineage4.9
|
None
|
SRR28859680
|
Sensitive
|
lineage3
|
None
|
SRR21732377
|
Sensitive
|
lineage4.8
|
None
|
SRR27450590
|
Sensitive
|
lineage4.5
|
None
|
SRR21732754
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827500
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR25827552
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR26112465
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR21733364
|
Sensitive
|
lineage4.5
|
None
|
SRR27450435
|
Sensitive
|
lineage3
|
None
|
SRR21733353
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28860193
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR21732110
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR25827506
|
MDR-TB
|
lineage3;lineage4.8
|
None
|
SRR24709877
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827699
|
Sensitive
|
lineage3;lineage4.9
|
None
|
SRR27450423
|
Other
|
lineage3.1.2.1
|
None
|
SRR25827649
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21733266
|
HR-TB
|
lineage1.1.1
|
None
|
ERR12057474
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28859849
|
Other
|
lineage2.2.1
|
None
|
SRR16088123
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827488
|
MDR-TB
|
lineage1.2.2.2;lineage4.3.3
|
None
|
SRR25827519
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR27450358
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21732753
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28859917
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868703
|
Other
|
lineage2.2.1
|
None
|
SRR27450369
|
Other
|
lineage2.2.1
|
None
|
SRR28868832
|
Sensitive
|
lineage4.1
|
None
|
SRR28868668
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25827493
|
Sensitive
|
lineage3
|
None
|
SRR21733133
|
Other
|
lineage1.1.2
|
None
|
SRR24255894
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827742
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR26112374
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868618
|
Sensitive
|
lineage3
|
None
|
SRR27450419
|
Sensitive
|
lineage3
|
None
|
SRR25827642
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27450112
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR23861838
|
HR-TB
|
lineage2.2.1
|
None
|
SRR24256369
|
Other
|
lineage2.2.1
|
None
|
SRR25827450
|
MDR-TB
|
lineage3;lineage4.1.1.1
|
None
|
SRR21733204
|
Sensitive
|
lineage1.1.2
|
None
|
SRR26558635
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR24255946
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR25827658
|
Other
|
lineage1.1.2
|
None
|
SRR24256134
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28434986
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27450352
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28868728
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR25827608
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827719
|
MDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR26558624
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR26112009
|
HR-TB
|
lineage4.8
|
None
|
ERR11488607
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR24255976
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21733343
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827610
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR25827769
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
SRR28868362
|
Sensitive
|
lineage2.2.2
|
None
|
SRR28868599
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28868609
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868837
|
Sensitive
|
lineage4.4
|
None
|
SRR28858476
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR25827751
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR27450394
|
Sensitive
|
lineage3
|
None
|
SRR28868853
|
Other
|
lineage4.5
|
None
|
SRR28860191
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28868762
|
Sensitive
|
lineage2.1
|
None
|
SRR27450193
|
Sensitive
|
lineage3
|
None
|
SRR29440762
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR29440979
|
Sensitive
|
lineage3
|
None
|
SRR21733360
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25827404
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3
|
None
|
SRR27450179
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR24709881
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22251365
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR25827739
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR28858603
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28859621
|
Sensitive
|
lineage4.8
|
None
|
SRR21732809
|
Sensitive
|
lineage4
|
None
|
SRR21733135
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25827481
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR21733189
|
Sensitive
|
lineage1.1.1
|
None
|
SRR24256035
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27450426
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR27450370
|
Other
|
La1.2.BCG
|
None
|
SRR27450278
|
Sensitive
|
lineage1.1.1
|
None
|
SRR25827659
|
RR-TB
|
lineage3.1.2
|
None
|
SRR28860201
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868460
|
Sensitive
|
lineage3
|
None
|
SRR21732956
|
Sensitive
|
lineage3.1
|
None
|
SRR25827444
|
XDR-TB
|
lineage3
|
None
|
SRR28859990
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28860188
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28868624
|
Sensitive
|
lineage4.5
|
None
|
SRR28868650
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR25827643
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR28868516
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR21733215
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR24710129
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24709992
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28860121
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25827743
|
Sensitive
|
lineage3
|
None
|
SRR27450425
|
HR-TB
|
La1.2.BCG
|
None
|
SRR26965295
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27450350
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR27450579
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28860074
|
Sensitive
|
lineage4.9
|
None
|
SRR27450135
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR27450105
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR26112551
|
Sensitive
|
lineage3
|
None
|
SRR25827409
|
Sensitive
|
lineage4.9
|
None
|
SRR25827452
|
MDR-TB
|
lineage1.1.2;lineage2.2.1;lineage4.2.2.2
|
None
|
SRR28868735
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733142
|
Sensitive
|
lineage3
|
None
|
SRR24710091
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27450297
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827501
|
Sensitive
|
lineage3.1.2
|
None
|
SRR21732816
|
HR-TB
|
lineage3
|
None
|
SRR24709969
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859639
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR21732118
|
HR-TB
|
lineage4.3
|
None
|
SRR21733208
|
Sensitive
|
lineage1.1.3.3
|
None
|
SRR26111942
|
HR-TB
|
lineage2.2.1
|
None
|
SRR27449992
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27450140
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27450314
|
Other
|
lineage3
|
None
|
SRR28868377
|
Other
|
lineage2.2.1
|
None
|
SRR28868524
|
Sensitive
|
lineage4.6.1.1
|
None
|
DRR473889
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR28868462
|
Sensitive
|
lineage3
|
None
|
SRR21733185
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR21732831
|
Sensitive
|
lineage4.5
|
None
|
SRR24255957
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21733361
|
Sensitive
|
lineage3
|
None
|
SRR28859632
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450379
|
Other
|
La1.2.BCG
|
None
|
SRR28868444
|
Sensitive
|
lineage3
|
None
|
SRR28868748
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28868855
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28858365
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR27450288
|
Sensitive
|
lineage1.1.1
|
None
|
SRR27450282
|
Other
|
lineage2.2.1
|
None
|
SRR27450575
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR24799218
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR27450280
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR28868734
|
Sensitive
|
lineage3
|
None
|
SRR28868842
|
Other
|
lineage3
|
None
|
SRR21732927
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26558625
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR28860101
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28860186
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR21732830
|
Sensitive
|
lineage1.1.2
|
None
|
SRR26112590
|
Sensitive
|
lineage4.3.3
|
None
|
SRR27450372
|
HR-TB
|
lineage4.2.2
|
None
|
SRR25827343
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3
|
None
|
SRR27450341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27450367
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR24710113
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26112451
|
Sensitive
|
lineage2.2.2
|
None
|
SRR24256382
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26397816
|
Other
|
lineage4.9
|
None
|
SRR28859980
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868558
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28858405
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28859993
|
Sensitive
|
lineage4.3.1
|
None
|
SRR21732791
|
HR-TB
|
lineage1.1.2
|
None
|
SRR25827513
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR21732813
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR26112770
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827633
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR28858424
|
Other
|
lineage1.1.3.1
|
None
|
SRR25827405
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25827304
|
XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
SRR21733265
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868783
|
HR-TB
|
lineage2.2.1
|
None
|
SRR21733191
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR27450155
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450373
|
Sensitive
|
lineage3
|
None
|
SRR21732953
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868375
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR28860185
|
Other
|
La1.4
|
None
|
SRR28868741
|
Sensitive
|
lineage4.4
|
None
|
SRR28868852
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR27449990
|
Sensitive
|
lineage3
|
None
|
SRR25827375
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1
|
None
|
SRR23861983
|
Other
|
lineage2.2.1
|
None
|
SRR16087876
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21732950
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR21733144
|
Sensitive
|
lineage1.1.1
|
None
|
SRR22251380
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR22251381
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868515
|
HR-TB
|
lineage3
|
None
|
SRR28868831
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28860062
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28868559
|
Other
|
lineage1.1.1.1
|
None
|
SRR21733354
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR16088112
|
Sensitive
|
lineage4.3.3
|
None
|
SRR26112566
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827407
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR25827717
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3;lineage4
|
None
|
SRR16088124
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27450582
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR21733141
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR27450551
|
Sensitive
|
lineage4.8
|
None
|
SRR27450336
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR25827435
|
XDR-TB
|
lineage2.2.1.1
|
None
|
SRR22251361
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868419
|
Other
|
lineage3
|
None
|
SRR28868564
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28868552
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868833
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450502
|
Sensitive
|
lineage3
|
None
|
SRR27450545
|
Sensitive
|
lineage3
|
None
|
SRR28868494
|
Other
|
lineage2.2.1
|
None
|
SRR27450146
|
Sensitive
|
lineage4.9
|
None
|
SRR27450591
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450549
|
Sensitive
|
lineage4.2.2.2
|
None
|
SRR27450543
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR27449995
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR27450133
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25827564
|
Sensitive
|
lineage3
|
None
|
SRR28868547
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR28868553
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR28868744
|
Sensitive
|
lineage3
|
None
|
SRR28858375
|
Sensitive
|
lineage4.7
|
None
|
SRR28868605
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868630
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868839
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868678
|
Sensitive
|
lineage1.1.2
|
None
|
SRR22251378
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR27450016
|
Sensitive
|
lineage1.1.2
|
None
|
SRR22249489
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR27450292
|
Sensitive
|
lineage4.5
|
None
|
SRR28868399
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868648
|
Sensitive
|
lineage3
|
None
|
SRR28868560
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28858736
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859635
|
Sensitive
|
lineage4.3.3
|
None
|
SRR26111944
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859845
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28868411
|
Sensitive
|
lineage4.4.2
|
None
|
SRR28868490
|
Sensitive
|
lineage4.5
|
None
|
SRR28859922
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28868546
|
Sensitive
|
lineage4.4.2
|
None
|
SRR28868651
|
Sensitive
|
lineage4.3.3
|
None
|
SRR27449993
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR24256053
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827579
|
Sensitive
|
lineage3;lineage4.9
|
None
|
SRR25827562
|
XDR-TB
|
lineage2.2.1;lineage4.2.2.2
|
None
|
SRR25827499
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR27450097
|
Sensitive
|
lineage4.3.3
|
None
|
SRR27450281
|
Sensitive
|
lineage1.1.2
|
None
|
SRR24256362
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827467
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR25827812
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3
|
None
|
SRR27449994
|
Other
|
lineage4.8
|
None
|
SRR25827396
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827487
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR28868458
|
Other
|
lineage4.4
|
None
|
SRR28859925
|
Sensitive
|
lineage3
|
None
|
SRR28868464
|
HR-TB
|
lineage2.2.1
|
None
|
SRR27450556
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR16088584
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR27450111
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR27450550
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR26558641
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR28339303
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827646
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1
|
None
|
SRR28859661
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26558634
|
HR-TB
|
lineage2.2.1
|
None
|
SRR25827370
|
MDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR27449985
|
HR-TB
|
lineage1.1.3.3
|
None
|
SRR25827810
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3
|
None
|