lineage | Count |
---|---|
lineage1.2.2.2 | 2 |
lineage4.1.3 | 1 |
lineage4.1.2.1 | 11 |
lineage4.4.1.1 | 4 |
lineage2.2.1 | 40 |
lineage4.8 | 21 |
lineage4.3.3 | 8 |
lineage4.3.4.2 | 3 |
lineage3 | 9 |
lineage4.8.1 | 1 |
lineage4.1.2 | 5 |
lineage4.9 | 2 |
lineage1.1.3.3 | 1 |
La1.8.1 | 2 |
lineage4.3.2 | 2 |
lineage3.1.1 | 1 |
lineage1.1.2 | 5 |
lineage2.2.1.1 | 2 |
lineage3.1.2 | 1 |
lineage2.2.1.2 | 2 |
lineage4.3.3;lineage3 | 1 |
La1.8.2 | 10 |
La1.2 | 8 |
lineage4.3.4.1 | 3 |
lineage1.2.1.2.1 | 3 |
lineage4.2.1 | 4 |
lineage4.2.1.1 | 4 |
lineage4.2.2.2 | 1 |
lineage4 | 1 |
spoligotype | Count |
---|---|
None | 158 |
ID | Drug resistance | Lineage | Country iso2 | ERR11050920 | Sensitive | lineage1.2.2.2 | None | ERR11080823 | Sensitive | lineage4.1.3 | None | ERR11082588 | Sensitive | lineage4.1.2.1 | None | ERR11082402 | HR-TB | lineage4.4.1.1 | None | SRR23861838 | HR-TB | lineage2.2.1 | None | SRR23861779 | Sensitive | lineage4.8 | None | SRR23862019 | Sensitive | lineage4.8 | None | SRR23861870 | Sensitive | lineage4.8 | None | SRR23861983 | Other | lineage2.2.1 | None | SRR23861982 | MDR-TB | lineage2.2.1 | None | SRR23862189 | Sensitive | lineage4.3.3 | None | SRR23862198 | Sensitive | lineage4.3.3 | None | SRR23862195 | Other | lineage4.8 | None | SRR23862196 | Other | lineage4.4.1.1 | None | SRR23938601 | HR-TB | lineage2.2.1 | None | ERR11156386 | Sensitive | lineage4.8 | None | SRR23938700 | Sensitive | lineage2.2.1 | None | SRR23938650 | MDR-TB | lineage2.2.1 | None | ERR7363086 | Sensitive | lineage4.3.4.2 | None | SRR24114358 | MDR-TB | lineage3 | None | ERR4830876 | MDR-TB | lineage4.4.1.1 | sz | ERR11049780 | Sensitive | lineage3 | None | ERR10748287 | MDR-TB | lineage2.2.1 | None | ERR11049773 | Sensitive | lineage4.1.2.1 | None | SRR6339639 | Sensitive | lineage2.2.1 | None | ERR10748276 | MDR-TB | lineage2.2.1 | None | ERR10748297 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748298 | MDR-TB | lineage2.2.1 | None | ERR10748323 | MDR-TB | lineage4.8.1 | None | ERR10748295 | MDR-TB | lineage4.1.2 | None | ERR10748306 | MDR-TB | lineage2.2.1 | None | ERR10748294 | MDR-TB | lineage4.9 | None | ERR4796958 | Other | lineage1.1.3.3 | in | ERR4627360 | Other | La1.8.1 | None | ERR4796853 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796907 | MDR-TB | lineage4.3.3 | in | ERR10969157 | Sensitive | lineage4.3.2 | None | ERR11043856 | Sensitive | lineage3.1.1 | None | ERR4627382 | Other | La1.8.1 | None | ERR4796897 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797029 | Sensitive | lineage1.1.2 | in | ERR4796966 | MDR-TB | lineage2.2.1 | in | ERR4796961 | Pre-XDR-TB | lineage3 | in | ERR4796992 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797020 | MDR-TB | lineage3 | in | ERR4797025 | Pre-XDR-TB | lineage3 | in | ERR4796971 | Sensitive | lineage1.2.2.2 | in | ERR4797003 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797030 | Sensitive | lineage1.1.2 | in | ERR4797047 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797035 | Pre-XDR-TB | lineage4.8 | in | ERR4797050 | MDR-TB | lineage1.1.2 | in | ERR4797053 | MDR-TB | lineage3.1.2 | in | ERR4797519 | Sensitive | lineage2.2.1.2 | in | ERR4797091 | Sensitive | lineage3 | in | ERR4797114 | Pre-XDR-TB | lineage4.3.3;lineage3 | in | ERR4797058 | Sensitive | lineage2.2.1.2 | in | ERR4797133 | MDR-TB | lineage1.1.2 | in | ERR4797159 | Sensitive | lineage3 | in | ERR6139642 | Other | La1.8.2 | None | ERR6140819 | Other | La1.8.2 | None | ERR6140351 | Other | La1.8.2 | None | ERR6140760 | Other | La1.8.2 | None | ERR6139636 | Other | La1.8.2 | None | ERR6140135 | Other | La1.8.2 | None | ERR6140659 | Other | La1.8.2 | None | ERR6140809 | Other | La1.8.2 | None | ERR6140812 | Other | La1.8.2 | None | ERR6140813 | Other | La1.8.2 | None | ERR6198216 | Other | La1.2 | None | ERR6198378 | Other | La1.2 | None | ERR6198349 | Other | La1.2 | None | ERR6198393 | Other | La1.2 | None | ERR11049898 | Sensitive | lineage4.1.2.1 | None | ERR6198394 | Other | La1.2 | None | ERR6201801 | Other | La1.2 | None | ERR6198390 | Other | La1.2 | None | ERR6201794 | Other | La1.2 | None | ERR7764328 | HR-TB | lineage4.3.4.1 | None | ERR11049921 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049955 | HR-TB | lineage4.1.2.1 | None | ERR11049968 | Sensitive | lineage4.9 | None | ERR7764342 | Sensitive | lineage4.3.4.2 | None | ERR7764394 | Other | lineage4.8 | None | ERR7764375 | Sensitive | lineage4.8 | None | ERR7764409 | Sensitive | lineage4.3.4.1 | None | ERR9811807 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR9119655 | Sensitive | lineage2.2.1 | None | ERR11050092 | Sensitive | lineage4.3.3 | None | ERR11050057 | Sensitive | lineage4.1.2.1 | None | ERR9125310 | Sensitive | lineage4.8 | None | ERR9285887 | Sensitive | lineage4.4.1.1 | None | ERR11050121 | Sensitive | lineage4.1.2.1 | None | SRR12006537 | Sensitive | lineage1.2.1.2.1 | None | SRR069970 | MDR-TB | lineage1.1.2 | None | ERR11050186 | Sensitive | lineage3 | None | SRR12006621 | Sensitive | lineage1.2.1.2.1 | None | ERR11050514 | Sensitive | lineage3 | None | SRR12006639 | Sensitive | lineage1.2.1.2.1 | None | SRR14781857 | Other | lineage4.8 | None | SRR14781848 | Sensitive | lineage4.8 | None | SRR14781946 | MDR-TB | lineage2.2.1 | None | SRR14781914 | HR-TB | lineage2.2.1 | None | SRR14782417 | MDR-TB | lineage4.2.1 | None | SRR14782241 | Sensitive | lineage2.2.1 | None | SRR14782314 | Sensitive | lineage4.1.2 | None | SRR14782337 | Sensitive | lineage4.3.3 | None | SRR14782073 | Sensitive | lineage4.8 | None | SRR14782137 | Sensitive | lineage2.2.1 | None | SRR14782371 | Sensitive | lineage4.8 | None | SRR14782397 | Sensitive | lineage4.1.2 | None | SRR14782528 | MDR-TB | lineage2.2.1 | None | SRR14782492 | Sensitive | lineage4.8 | None | SRR14782562 | MDR-TB | lineage2.2.1 | None | SRR14782633 | Sensitive | lineage2.2.1 | None | SRR14782571 | Sensitive | lineage2.2.1 | None | SRR14782590 | MDR-TB | lineage2.2.1 | None | SRR14782592 | HR-TB | lineage4.2.1.1 | None | SRR14782615 | MDR-TB | lineage2.2.1 | None | SRR14782635 | Sensitive | lineage4.8 | None | SRR14782692 | Other | lineage4.2.1.1 | None | SRR14782669 | Sensitive | lineage2.2.1 | None | SRR14782690 | Sensitive | lineage4.1.2.1 | None | SRR14782788 | Other | lineage2.2.1 | None | SRR14801551 | Pre-XDR-TB | lineage4.2.1 | None | SRR14782825 | Sensitive | lineage2.2.1 | None | SRR14801715 | MDR-TB | lineage2.2.1 | None | SRR14801669 | Other | lineage4.1.2 | None | SRR14802223 | Sensitive | lineage4.2.1.1 | None | SRR14801767 | MDR-TB | lineage4.2.1 | None | SRR14801829 | Sensitive | lineage2.2.1 | None | SRR14801844 | MDR-TB | lineage4.2.1 | None | SRR16088437 | Other | lineage2.2.1 | None | SRR16088228 | Other | lineage4.8 | None | SRR16088231 | Sensitive | lineage4.2.1.1 | None | SRR15661598 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11050672 | Sensitive | lineage4.3.3 | None | SRR16088135 | Sensitive | lineage4.8 | None | SRR16088226 | HR-TB | lineage4.8 | None | SRR18714928 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088453 | Sensitive | lineage4.1.2.1 | None | ERR11050717 | RR-TB | lineage4.2.2.2 | None | SRR18714757 | HR-TB | lineage4.8 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR18714799 | Sensitive | lineage4.3.4.1 | None | SRR18714835 | Sensitive | lineage4.1.2.1 | None | SRR18714836 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714894 | Sensitive | lineage4.1.2.1 | None | SRR18714942 | HR-TB | lineage4.1.2 | None | SRR18715027 | Sensitive | lineage4.3.3 | None | SRR18715284 | Sensitive | lineage4.3.3 | None | SRR18715190 | MDR-TB | lineage2.2.1 | None | SRR18715260 | HR-TB | lineage2.2.1 | None | SRR18715430 | Sensitive | lineage4.8 | None | SRR18715394 | Sensitive | lineage4 | None | SRR18715448 | Sensitive | lineage4.8 | None | SRR19303941 | Sensitive | lineage4.3.2 | None | ERR11050832 | Sensitive | lineage4.1.2.1 | None |
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