lineage | Count |
---|---|
lineage2.1 | 2 |
lineage2.2.1;lineage6.3 | 1 |
lineage4.9 | 9 |
lineage2.1;lineage4.9 | 4 |
lineage2.1;lineage4.9;lineage6.3 | 5 |
lineage4.9;lineage6.3 | 2 |
3 | |
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage2.2.1 | 1 |
M.canetti;lineage2.1;lineage4.9 | 2 |
La3;lineage4.9 | 1 |
lineage2.2.1;lineage3 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
lineage4 | 1 |
La3;lineage2 | 1 |
La1.7;M.canetti;lineage4.9 | 1 |
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
lineage2.1;lineage6.3 | 1 |
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
La3;lineage2.1;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | ERR702406 | Other | lineage2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR4816656 | Other | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR234659 | HR-TB | None | SRR18213713 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3797069 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR25827682 | Other | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818929 | HR-TB | lineage4.9 | None |
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