lineage | Count |
---|---|
18 | |
lineage3 | 2 |
lineage4.1.3 | 1 |
lineage2.2 | 1 |
lineage5.1.2 | 10 |
lineage2.2.1 | 3 |
lineage4.3.4.2.1 | 1 |
lineage4.8.1;lineage3.1.1 | 1 |
La1.7.1 | 1 |
lineage4 | 1 |
lineage1.2.1.2 | 1 |
lineage1.1.3 | 1 |
lineage4.9 | 1 |
lineage1.2.2.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.8 | 2 |
spoligotype | Count |
---|---|
None | 46 |
ID | Drug resistance | Lineage | Country iso2 | ERR2693257 | Other | None | SRR5341418 | Other | None | ERR2515022 | Sensitive | lineage3 | None | ERR4820693 | Sensitive | lineage3 | None | ERR2679247 | RR-TB | lineage4.1.3 | None | SRR6484945 | Sensitive | lineage2.2 | None | SRR6046362 | HR-TB | None | SRR6046482 | HR-TB | None | ERR1082119 | Sensitive | lineage5.1.2 | gh | SRR6046460 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6785501 | MDR-TB | lineage2.2.1 | None | SRR6982502 | Sensitive | lineage4.3.4.2.1 | None | SRR6855681 | Other | lineage4.8.1;lineage3.1.1 | None | ERR4815311 | Sensitive | lineage5.1.2 | gb | SRR6855855 | Other | La1.7.1 | None | ERR502889 | Other | None | ERR10762456 | MDR-TB | lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR5330907 | Sensitive | lineage5.1.2 | None | ERR5336146 | Sensitive | lineage5.1.2 | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR12115317 | MDR-TB | lineage5.1.2 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR6336802 | Other | lineage1.2.1.2 | None | ERR6359045 | HR-TB | None | ERR9657191 | Sensitive | lineage1.1.3 | None | ERR9125661 | Sensitive | lineage5.1.2 | None | SRR16058371 | Sensitive | lineage5.1.2 | None | SRR11823427 | Sensitive | lineage4.9 | None | ERR158583 | HR-TB | None | SRR6797724 | MDR-TB | lineage1.2.2.2 | None | ERR553045 | HR-TB | lineage4.1.1.3 | None | SRR24302112 | Sensitive | lineage5.1.2 | None | SRR3675493 | Sensitive | lineage5.1.2 | None | ERR2229093 | HR-TB | lineage4.8 | None | ERR4815985 | Other | lineage5.1.2 | None | SRR3675234 | Other | None | ERR2229236 | Other | lineage4.8 | None | ERR1035162 | Other | None | SRR3675550 | Other | None |
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