Rv3795 - p.Ser168Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
45 Sensitive
0 RR-TB
19 HR-TB
11 MDR-TB
24 Pre-XDR-TB
7 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 1 |
| lineage3 | 21 |
| lineage3.1.2 | 1 |
| lineage3;lineage4.8 | 1 |
| lineage6.1.1 | 1 |
| lineage2.2.1;lineage3 | 5 |
| lineage4.8 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1 | 15 |
| lineage1.2.2.2;lineage4.3.3 | 1 |
| lineage4.2.2 | 1 |
| lineage2.2.1.1;lineage3 | 3 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage1.1.1.1 | 3 |
| lineage4.3.3 | 3 |
| lineage1.2.1.2.1 | 8 |
| lineage2.2.1.1 | 4 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage3;lineage4.1.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9 | 7 |
| lineage4.1.2.1 | 3 |
| lineage2.2 | 1 |
| lineage2.2.1.1;lineage3;lineage4 | 2 |
| lineage4.1.2 | 1 |
| lineage1.1.2 | 3 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.5 | 1 |
| La1.2.BCG | 4 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage1.1.3 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3.1.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22251382 | HR-TB | lineage2.2.2 | None | SRR25827736 | XDR-TB | lineage3 | None | SRR28868844 | Sensitive | lineage3.1.2 | None | SRR25827525 | Pre-XDR-TB | lineage3;lineage4.8 | None | SRR21733273 | Sensitive | lineage6.1.1 | None | SRR25827671 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR25827552 | Pre-XDR-TB | lineage4.8 | None | SRR27450376 | Sensitive | lineage4.4.1.2 | None | SRR25827387 | Pre-XDR-TB | lineage3 | None | ERR11049874 | Sensitive | lineage4.7 | None | SRR27450335 | Sensitive | lineage2.2.1 | None | SRR25827488 | MDR-TB | lineage1.2.2.2;lineage4.3.3 | None | SRR27450372 | HR-TB | lineage4.2.2 | None | SRR25827343 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR27450145 | Sensitive | lineage1.1.1.1 | None | SRR25827842 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251379 | Sensitive | lineage4.3.3 | None | SRR25827491 | Sensitive | lineage3 | None | SRR21732798 | Sensitive | lineage1.2.1.2.1 | None | SRR28868597 | Sensitive | lineage2.2.1 | None | SRR28868830 | Sensitive | lineage1.2.1.2.1 | None | SRR28868547 | Sensitive | lineage1.1.1.1 | None | SRR25827469 | Sensitive | lineage3 | None | SRR21733231 | Sensitive | lineage2.2.1.1 | None | SRR28868428 | Other | lineage1.2.1.2.1 | None | SRR25827460 | Pre-XDR-TB | lineage4.8 | None | SRR25827375 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR25827450 | MDR-TB | lineage3;lineage4.1.1.1 | None | SRR28868815 | Sensitive | lineage3 | None | SRR26558635 | HR-TB | lineage1.2.2.2 | None | SRR28868748 | HR-TB | lineage2.2.1 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR18714770 | Other | lineage4.1.2.1 | None | ERR8976043 | HR-TB | lineage2.2 | None | SRR25827487 | XDR-TB | lineage2.2.1;lineage3 | None | SRR25827717 | Pre-XDR-TB | lineage2.2.1.1;lineage3;lineage4 | None | SRR27450582 | Other | lineage1.2.1.2.1 | None | SRR21733344 | Sensitive | lineage2.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR26558641 | MDR-TB | lineage4.1.2 | None | SRR21733138 | Sensitive | lineage1.1.2 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR22251134 | Sensitive | lineage4.1.2.1 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | SRR25827719 | MDR-TB | lineage2.2.1;lineage3 | None | SRR27450589 | Sensitive | lineage1.1.3.1 | None | SRR27450143 | Sensitive | lineage3 | None | SRR25827751 | Pre-XDR-TB | lineage4.3.3 | None | SRR28434998 | MDR-TB | lineage2.2.1 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR28868587 | Sensitive | lineage4.5 | None | SRR27450142 | Sensitive | lineage1.2.1.2.1 | None | SRR22251377 | Sensitive | lineage2.2.1 | None | SRR25827657 | Pre-XDR-TB | lineage3 | None | SRR28868852 | Sensitive | lineage2.2.1.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR27450370 | Other | La1.2.BCG | None | SRR27450334 | Sensitive | lineage2.2.1 | None | SRR22251635 | Other | lineage1.2.1.2.1 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR27450425 | HR-TB | La1.2.BCG | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR28868606 | Other | lineage2.2.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR25827521 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827529 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None | SRR25827740 | Pre-XDR-TB | lineage2.2.1.1;lineage3;lineage4 | None | SRR22251345 | Other | lineage2.2.1 | None | SRR25827464 | MDR-TB | lineage1.1.2 | None | SRR25827462 | XDR-TB | lineage3 | None | SRR25827754 | Sensitive | lineage3 | None | SRR25827494 | Sensitive | lineage1.1.3 | None | SRR27450379 | Other | La1.2.BCG | None | SRR25827309 | MDR-TB | lineage2.2.1.1 | None | SRR25827699 | Sensitive | lineage3;lineage4.9 | None | SRR28868555 | Sensitive | lineage1.1.1 | None | SRR25827513 | XDR-TB | lineage2.2.1;lineage3 | None | SRR28868548 | Other | lineage3 | None | SRR28868615 | Sensitive | lineage3 | None | SRR27450374 | Sensitive | lineage1.1.2 | None | SRR25827401 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868653 | HR-TB | lineage3 | None | SRR25827537 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25827482 | XDR-TB | lineage2.2.1 | None | SRR25827562 | XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | SRR25827499 | Pre-XDR-TB | lineage3 | None | SRR28868413 | Sensitive | lineage4.3.4.2 | None | SRR22251360 | Sensitive | lineage4.8 | None | SRR28868637 | Other | lineage1.1.3.2 | None | SRR22251657 | Sensitive | lineage1.2.1.2.1 | None | SRR28868371 | Sensitive | lineage3 | None | SRR28868373 | Other | La1.2.BCG | None | SRR28868650 | Sensitive | lineage4.3.4.2 | None | ERR4816478 | HR-TB | lineage4 | None | SRR25827564 | Sensitive | lineage3 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR4816656 | Other | lineage4.9 | None | SRR28868466 | Sensitive | lineage3 | None | SRR24256335 | MDR-TB | lineage2.2.1 | None | SRR26558624 | Pre-XDR-TB | lineage3 | None | SRR25827769 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR28868838 | Sensitive | lineage3.1.2.1 | None | SRR25827660 | Sensitive | lineage3 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR28868460 | Sensitive | lineage3 | None | SRR28868564 | Sensitive | lineage4.3.3 | None | SRR28868461 | Sensitive | lineage1.2.1.2.1 | None | SRR25827393 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR25827643 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR25827852 | XDR-TB | lineage3 | None | SRR25827514 | Pre-XDR-TB | lineage3 | None | SRR25827389 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR27450178 | Sensitive | lineage1.1.1.1 | None | SRR25827635 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR24083673 | Sensitive | lineage4.1.2.1 | None |
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