Rv3806c - p.Val229Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
1 Sensitive
6 RR-TB
2 HR-TB
50 MDR-TB
27 Pre-XDR-TB
7 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 6 |
| lineage4.3.2.1 | 16 |
| lineage4.4.2 | 8 |
| lineage4.3.4.1 | 9 |
| lineage4.1.2.1 | 8 |
| lineage3 | 1 |
| lineage4.6.1.2 | 12 |
| lineage4.1.2 | 2 |
| lineage2.2.1 | 1 |
| lineage4.8 | 8 |
| lineage4.1.2;lineage4.8 | 1 |
| lineage4.3.3 | 4 |
| lineage4.6.1.1 | 2 |
| lineage2.2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.3 | 5 |
| lineage4.3 | 1 |
| lineage4.1.2.1;lineage4.2.1 | 2 |
| lineage4 | 2 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4797157 | MDR-TB | lineage4.2.2.2 | in | ERR4797648 | XDR-TB | lineage4.2.2.2 | in | ERR9907771 | MDR-TB | lineage4.3.2.1 | None | SRR21747044 | MDR-TB | lineage4.4.2 | None | ERR4813894 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4813903 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8186786 | MDR-TB | lineage4.4.2 | None | SAMN02586021 | MDR-TB | lineage4.3.2.1 | za | SRR5125075 | MDR-TB | lineage3 | None | ERR9993039 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR2510867 | Pre-XDR-TB | lineage4.1.2.1 | it | ERR9992840 | XDR-TB | lineage4.3.2.1 | None | ERR4813870 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR1173372 | MDR-TB | lineage4.6.1.2 | None | SRR29231557 | MDR-TB | lineage4.1.2 | None | ERR2653148 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13290743 | MDR-TB | lineage4.4.2 | None | SRR6797418 | MDR-TB | lineage2.2.1 | None | ERR13285170 | RR-TB | lineage4.1.2.1 | None | SRR7592387 | Pre-XDR-TB | lineage4.8 | None | SRR8186761 | MDR-TB | lineage4.4.2 | None | SRR29274083 | RR-TB | lineage4.1.2;lineage4.8 | None | SRR28394257 | MDR-TB | lineage4.3.3 | None | SRR8186785 | MDR-TB | lineage4.4.2 | None | ERR13261100 | XDR-TB | lineage4.2.2.2 | None | ERR4798120 | XDR-TB | lineage4.2.2.2 | in | ERR987781 | MDR-TB | lineage4.6.1.1 | None | ERR4798185 | XDR-TB | lineage4.2.2.2 | in | SAMN02585986 | MDR-TB | lineage4.3.2.1 | za | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR13191369 | Pre-XDR-TB | lineage2.2.2 | None | SRR9738489 | MDR-TB | lineage4.8 | None | ERR4813805 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR28393353 | MDR-TB | lineage4.3.2 | None | SRR28393556 | MDR-TB | lineage4.3.3 | None | SRR28351408 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | SRR28646104 | MDR-TB | lineage4.8 | None | ERR4813949 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR10680158 | MDR-TB | lineage4.1.3 | None | ERR1193766 | HR-TB | lineage4.3 | np | SAMN02380983 | MDR-TB | lineage4.6.1.2 | ug | ERR1199100 | RR-TB | lineage4.6.1.2 | cd | ERR1199145 | MDR-TB | lineage4.6.1.1 | ug | SRR29273736 | XDR-TB | lineage4.8 | None | ERR040125 | MDR-TB | lineage4.6.1.2 | ug | ERR1654678 | RR-TB | lineage4.6.1.2 | None | ERR11082021 | RR-TB | lineage4.1.2.1 | None | ERR10680078 | MDR-TB | lineage4.1.3 | None | ERR9992636 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR1062872 | MDR-TB | lineage4.6.1.2 | None | SRR8186762 | MDR-TB | lineage4.4.2 | None | SRR1173001 | MDR-TB | lineage4.3.2.1 | None | ERR4383955 | Sensitive | lineage4.3.3 | None | SRR1049562 | MDR-TB | lineage4.6.1.2 | None | SRR1184355 | MDR-TB | lineage4.3.2.1 | None | SRR3082112 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6356970 | Pre-XDR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR1174312 | MDR-TB | lineage4.6.1.2 | None | SRR1049561 | MDR-TB | lineage4.6.1.2 | None | SRR6356993 | Pre-XDR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR1175091 | MDR-TB | lineage4.3.2.1 | None | SRR29273759 | MDR-TB | lineage4.8 | None | ERR4799793 | XDR-TB | lineage4.2.2.2 | in | SRR1166137 | Pre-XDR-TB | lineage4.8 | ro | SRR1184361 | MDR-TB | lineage4.3.2.1 | None | SRR28394207 | MDR-TB | lineage4 | None | ERR4813808 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR2707000 | MDR-TB | lineage4.1.2 | cd | ERR2707074 | RR-TB | lineage4.6.1.2 | cd | ERR9992885 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR5486886 | Pre-XDR-TB | lineage4.8 | None | SRR8186784 | MDR-TB | lineage4.4.2 | None | ERR038740 | MDR-TB | lineage4.6.1.2 | ug | ERR1034720 | MDR-TB | lineage4 | pe | SRR7517789 | MDR-TB | lineage4.1.3 | ci | SRR3085351 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10680159 | MDR-TB | lineage4.1.3 | None | SRR1196572 | MDR-TB | lineage4.3.2.1 | None | ERR9907699 | MDR-TB | lineage4.3.3 | None | ERR9907710 | MDR-TB | lineage4.3.4.1 | None | ERR7363053 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR1173516 | MDR-TB | lineage4.3.2.1 | None | SRR10525335 | MDR-TB | lineage4.8 | None | SRR5535708 | MDR-TB | lineage4.1.3 | None | SRR1196540 | MDR-TB | lineage4.3.2.1 | None | ERR7363120 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR1140569 | MDR-TB | lineage4.6.1.2 | None | SRR7782648 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8774242 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR4423475 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR4813821 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4796282 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR8186787 | MDR-TB | lineage4.4.2 | None |
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