Rv3854c - c.171C>T
Drug resistance types
30 Sensitive
0 RR-TB
10 HR-TB
30 MDR-TB
19 Pre-XDR-TB
1 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 74 |
| 19 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2100325 | HR-TB | lineage4.1.1.1 | None | SRR22249996 | Sensitive | lineage4.1.1.1 | None | ERR552752 | Sensitive | lineage4.1.1.1 | de | ERR13286021 | Sensitive | lineage4.1.1.1 | None | ERR4817044 | Other | lineage4.1.1.1 | None | ERR4818370 | Other | lineage4.1.1.1 | None | ERR13285943 | Sensitive | lineage4.1.1.1 | None | ERR2503561 | Sensitive | lineage4.1.1.1 | fi | ERR13292585 | Sensitive | lineage4.1.1.1 | None | ERR1213950 | MDR-TB | lineage4.1.1.1 | bd | SRR29017221 | MDR-TB | lineage4.1.1.1 | None | ERR114477 | HR-TB | lineage4.1.1.1 | None | SRR6797612 | HR-TB | lineage4.1.1.1 | None | SRR29017578 | MDR-TB | lineage4.1.1.1 | None | ERR4553879 | MDR-TB | None | ERR4553700 | MDR-TB | None | SRR29017631 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR21677629 | HR-TB | lineage4.1.1.1 | None | ERR3132270 | MDR-TB | lineage4.1.1.1 | None | SRR29016874 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR29017163 | MDR-TB | lineage4.1.1.1 | None | SRR29016859 | MDR-TB | lineage4.1.1.1 | None | ERR4553457 | MDR-TB | None | ERR4553810 | MDR-TB | None | ERR4553618 | MDR-TB | None | SRR4423149 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR13285944 | Sensitive | lineage4.1.1.1 | None | ERR4818473 | Sensitive | lineage4.1.1.1 | gb | ERR4817419 | Sensitive | lineage4.1.1.1 | None | SRR6797637 | HR-TB | lineage4.1.1.1 | None | ERR4553769 | MDR-TB | None | SRR29017059 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR13093949 | Sensitive | lineage4.1.1.1 | None | SRR4423144 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4553831 | HR-TB | None | ERR4553848 | MDR-TB | lineage4.1.1.1 | None | SRR29016886 | MDR-TB | lineage4.1.1.1 | None | ERR13291478 | HR-TB | lineage4.1.1.1 | None | ERR4820061 | Sensitive | lineage4.1.1.1 | None | SRR22251782 | Sensitive | lineage4.1.1.1 | None | ERR4817336 | Sensitive | lineage4.1.1.1 | gb | SRR29017204 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR17658015 | MDR-TB | lineage4.1.1.1 | None | SRR29017617 | MDR-TB | lineage4.1.1.1 | None | ERR4814570 | Sensitive | lineage4.1.1.1 | gb | ERR4820084 | Sensitive | lineage4.1.1.1 | None | ERR1213945 | HR-TB | lineage4.1.1.1 | bd | SRR29017080 | MDR-TB | lineage4.1.1.1 | None | SRR6797272 | MDR-TB | lineage4.1.1.1 | None | ERR4553712 | MDR-TB | None | ERR4553932 | Pre-XDR-TB | None | ERR4553855 | MDR-TB | None | ERR4553485 | MDR-TB | None | ERR4553894 | XDR-TB | None | ERR4553863 | Pre-XDR-TB | None | ERR4553798 | MDR-TB | None | ERR13286022 | Sensitive | lineage4.1.1.1 | None | SRR28045952 | Sensitive | lineage4.1.1.1 | None | ERR4798699 | Sensitive | lineage4.1.1.1 | in | SRR6797426 | HR-TB | lineage4.1.1.1 | None | SRR6797627 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4798741 | MDR-TB | lineage4.1.1.1 | in | ERR5908231 | Sensitive | lineage4.1.1.1 | None | ERR233390 | Sensitive | lineage4.1.1.1 | np | ERR4818007 | Sensitive | lineage4.1.1.1 | gb | ERR13264957 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR2510421 | Pre-XDR-TB | lineage4.1.1.1 | pk | SRR29017448 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR13292583 | Sensitive | lineage4.1.1.1 | None | ERR4553683 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4553949 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR22250030 | Sensitive | lineage4.1.1.1 | None | SRR6797630 | Other | lineage4.1.1.1 | None | ERR4553981 | MDR-TB | None | SRR29017223 | MDR-TB | lineage4.1.1.1 | None | ERR4816331 | Sensitive | lineage4.1.1.1 | None | SRR6797389 | MDR-TB | lineage4.1.1.1 | None | ERR9119109 | Sensitive | lineage4.1.1.1 | None | SRR29017393 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR3132235 | HR-TB | lineage4.1.1.1 | None | ERR4553886 | Pre-XDR-TB | None | ERR4553513 | MDR-TB | None | SRR29289279 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4553467 | MDR-TB | None | ERR4553604 | MDR-TB | None | SRR22250203 | Sensitive | lineage4.1.1.1 | None | SRR6045920 | Sensitive | lineage4.1.1.1 | gb | ERR4553917 | MDR-TB | lineage4.1.1.1 | None | SRR30182459 | Sensitive | lineage4.1.1.1 | None | SRR29017586 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4820252 | Sensitive | lineage4.1.1.1 | gb | ERR13264939 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR13093948 | Sensitive | lineage4.1.1.1 | None |
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