Rv3854c - c.597delC


Drug resistance types
0 Sensitive 0 RR-TB 1 HR-TB 39 MDR-TB 168 Pre-XDR-TB 32 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.1.3 233
lineage2.2.2;lineage4.1.1.3 3
lineage3;lineage4.1.1.3 1
lineage4.1.1.3;lineage4.1.2 1
lineage2.2.1.1;lineage4.1.1.3 1
lineage4.1.1.3;lineage4.3.2.1 1
spoligotype Counts
spoligotype Count
None 240
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR13286099 MDR-TB lineage4.1.1.3 None
ERR4011976 Pre-XDR-TB lineage4.1.1.3 None
ERR5918040 Pre-XDR-TB lineage4.1.1.3 za
SRR29093345 MDR-TB lineage4.1.1.3 None
SRR29096345 Pre-XDR-TB lineage4.1.1.3 None
ERR2515475 Pre-XDR-TB lineage4.1.1.3 za
ERR13289296 MDR-TB lineage4.1.1.3 None
SRR8758896 Pre-XDR-TB lineage4.1.1.3 None
ERR4831528 MDR-TB lineage4.1.1.3 None
ERR4831558 Pre-XDR-TB lineage4.1.1.3 None
SRR10869227 Pre-XDR-TB lineage4.1.1.3 None
ERR9806869 Pre-XDR-TB lineage4.1.1.3 None
ERR8025711 Pre-XDR-TB lineage4.1.1.3 None
SRR29056327 Pre-XDR-TB lineage4.1.1.3 None
ERR8025573 Pre-XDR-TB lineage4.1.1.3 None
ERR9806880 Pre-XDR-TB lineage4.1.1.3 None
ERR7911704 MDR-TB lineage4.1.1.3 za
ERR8025703 Pre-XDR-TB lineage4.1.1.3 None
ERR2515568 Pre-XDR-TB lineage4.1.1.3 za
ERR5987307 MDR-TB lineage4.1.1.3 None
SRR16156730 Pre-XDR-TB lineage4.1.1.3 None
ERR7911601 Pre-XDR-TB lineage4.1.1.3 za
ERR2515133 Pre-XDR-TB lineage4.1.1.3 za
ERR9992746 XDR-TB lineage4.1.1.3 None
SRR16156282 XDR-TB lineage4.1.1.3 None
SRR16156747 MDR-TB lineage4.1.1.3 None
ERR1873546 Pre-XDR-TB lineage4.1.1.3 za
ERR9806953 Pre-XDR-TB lineage4.1.1.3 None
ERR7362011 Pre-XDR-TB lineage4.1.1.3 None
ERR9807004 Pre-XDR-TB lineage4.1.1.3 None
SRR16156243 MDR-TB lineage4.1.1.3 None
ERR10112853 XDR-TB lineage4.1.1.3 None
SRR29093427 Pre-XDR-TB lineage4.1.1.3 None
ERR6362393 MDR-TB lineage4.1.1.3 None
ERR10748318 MDR-TB lineage4.1.1.3 None
ERR10748320 Pre-XDR-TB lineage4.1.1.3 None
ERR9992751 XDR-TB lineage4.1.1.3 None
ERR10748424 MDR-TB lineage4.1.1.3 None
ERR8975740 XDR-TB lineage4.1.1.3 None
ERR7911677 Pre-XDR-TB lineage4.1.1.3 za
ERR4423566 Pre-XDR-TB lineage4.1.1.3 None
ERR9806952 Pre-XDR-TB lineage4.1.1.3 None
SRR29055798 Pre-XDR-TB lineage4.1.1.3 None
ERR4011938 Pre-XDR-TB lineage4.1.1.3 None
ERR1873554 Pre-XDR-TB lineage4.1.1.3 za
ERR9119915 Pre-XDR-TB lineage4.1.1.3 None
ERR10748165 XDR-TB lineage4.1.1.3 None
ERR9992998 XDR-TB lineage4.1.1.3 None
ERR10112890 Pre-XDR-TB lineage4.1.1.3 None
ERR9806962 Pre-XDR-TB lineage4.1.1.3 None
ERR9806939 Pre-XDR-TB lineage4.1.1.3 None
ERR9993065 XDR-TB lineage4.1.1.3 None
ERR9993114 XDR-TB lineage4.1.1.3 None
ERR1034639 Pre-XDR-TB lineage4.1.1.3 None
SRR29093191 Pre-XDR-TB lineage4.1.1.3 None
ERR9993208 XDR-TB lineage4.1.1.3 None
ERR13289008 Pre-XDR-TB lineage2.2.2;lineage4.1.1.3 None
SRR29093214 Pre-XDR-TB lineage4.1.1.3 None
SRR29056277 Pre-XDR-TB lineage4.1.1.3 None
ERR10748144 Pre-XDR-TB lineage4.1.1.3 None
SRR29093268 Pre-XDR-TB lineage4.1.1.3 None
ERR7911597 Pre-XDR-TB lineage4.1.1.3 za
ERR9806897 Pre-XDR-TB lineage4.1.1.3 None
ERR7911593 Pre-XDR-TB lineage4.1.1.3 za
ERR9807014 Pre-XDR-TB lineage4.1.1.3 None
ERR10112843 XDR-TB lineage4.1.1.3 None
ERR10748381 MDR-TB lineage3;lineage4.1.1.3 None
ERR9120109 MDR-TB lineage4.1.1.3 None
ERR9806973 Pre-XDR-TB lineage4.1.1.3 None
ERR8025592 Pre-XDR-TB lineage4.1.1.3 None
ERR4808876 Pre-XDR-TB lineage4.1.1.3 za
ERR7911684 Pre-XDR-TB lineage4.1.1.3 za
ERR9993264 XDR-TB lineage4.1.1.3 None
ERR1873550 Pre-XDR-TB lineage4.1.1.3 za
ERR4831561 Pre-XDR-TB lineage4.1.1.3 None
SRR16156755 MDR-TB lineage4.1.1.3 None
ERR7911663 Pre-XDR-TB lineage4.1.1.3 za
ERR4423565 Pre-XDR-TB lineage4.1.1.3 None
ERR6362771 Pre-XDR-TB lineage4.1.1.3 None
ERR10112840 XDR-TB lineage4.1.1.3 None
ERR5918023 Pre-XDR-TB lineage4.1.1.3 za
SRR29093749 Pre-XDR-TB lineage4.1.1.3 None
SRR10869161 Pre-XDR-TB lineage4.1.1.3 None
SRR29093310 Pre-XDR-TB lineage4.1.1.3 None
ERR8975781 XDR-TB lineage4.1.1.3 None
SRR29096872 Pre-XDR-TB lineage4.1.1.3 None
ERR9993218 XDR-TB lineage4.1.1.3 None
ERR7911636 Pre-XDR-TB lineage2.2.2;lineage4.1.1.3 za
SRR29096311 Pre-XDR-TB lineage4.1.1.3 None
SRR29231338 Pre-XDR-TB lineage4.1.1.3;lineage4.1.2 None
ERR9120110 MDR-TB lineage4.1.1.3 None
ERR9993229 XDR-TB lineage4.1.1.3 None
ERR10748315 Pre-XDR-TB lineage4.1.1.3 None
ERR9993216 MDR-TB lineage4.1.1.3 None
SRR29055594 Pre-XDR-TB lineage4.1.1.3 None
ERR1873448 Pre-XDR-TB lineage4.1.1.3 za
ERR1873391 Pre-XDR-TB lineage4.1.1.3 None
ERR8975742 XDR-TB lineage4.1.1.3 None
SRR29056301 Pre-XDR-TB lineage4.1.1.3 None
ERR4011940 Pre-XDR-TB lineage4.1.1.3 None
SRR16156239 MDR-TB lineage4.1.1.3 None
ERR9119916 Pre-XDR-TB lineage4.1.1.3 None
SRR10869203 Pre-XDR-TB lineage4.1.1.3 None
ERR7911628 Pre-XDR-TB lineage4.1.1.3 za
SRR16156240 MDR-TB lineage4.1.1.3 None
ERR9807012 Pre-XDR-TB lineage4.1.1.3 None
SRR10869213 Pre-XDR-TB lineage4.1.1.3 None
ERR10748158 XDR-TB lineage4.1.1.3 None
ERR9993230 XDR-TB lineage4.1.1.3 None
SRR29096883 MDR-TB lineage4.1.1.3 None
ERR4011939 Pre-XDR-TB lineage4.1.1.3 None
ERR9806866 Pre-XDR-TB lineage4.1.1.3 None
ERR10112876 Pre-XDR-TB lineage4.1.1.3 None
SRR16156241 MDR-TB lineage4.1.1.3 None
SRR29093245 Pre-XDR-TB lineage4.1.1.3 None
ERR9806944 Pre-XDR-TB lineage4.1.1.3 None
SRR29056112 Pre-XDR-TB lineage4.1.1.3 None
ERR1873462 Pre-XDR-TB lineage4.1.1.3 za
ERR9993088 MDR-TB lineage4.1.1.3 None
ERR9993009 XDR-TB lineage4.1.1.3 None
ERR1034990 MDR-TB lineage4.1.1.3 za
SRR10869158 Pre-XDR-TB lineage4.1.1.3 None
SRR16156738 MDR-TB lineage2.2.1.1;lineage4.1.1.3 None
ERR9119693 MDR-TB lineage4.1.1.3 None
ERR9806971 Pre-XDR-TB lineage4.1.1.3 None
ERR8025662 Pre-XDR-TB lineage4.1.1.3 None
ERR1035061 Pre-XDR-TB lineage4.1.1.3 za
ERR1873540 Pre-XDR-TB lineage4.1.1.3 za
ERR10748448 Pre-XDR-TB lineage4.1.1.3 None
ERR8025490 Pre-XDR-TB lineage4.1.1.3 None
ERR8025508 Pre-XDR-TB lineage4.1.1.3 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR2515337 XDR-TB lineage4.1.1.3 za
ERR9992753 XDR-TB lineage4.1.1.3 None
SRR29093248 Pre-XDR-TB lineage4.1.1.3 None
ERR9992989 XDR-TB lineage4.1.1.3 None
ERR11774973 MDR-TB lineage4.1.1.3 None
ERR5918039 Pre-XDR-TB lineage4.1.1.3 za
ERR6362259 Pre-XDR-TB lineage4.1.1.3 None
SRR29093183 Pre-XDR-TB lineage4.1.1.3 None
ERR9029384 Pre-XDR-TB lineage4.1.1.3 None
ERR9993209 XDR-TB lineage4.1.1.3 None
ERR4808942 Pre-XDR-TB lineage4.1.1.3 za
ERR1873400 Pre-XDR-TB lineage4.1.1.3 None
SRR29096406 Pre-XDR-TB lineage4.1.1.3 None
SRR29096562 Pre-XDR-TB lineage4.1.1.3 None
ERR13289406 XDR-TB lineage4.1.1.3 None
ERR8025541 Pre-XDR-TB lineage4.1.1.3 None
ERR8025744 Pre-XDR-TB lineage4.1.1.3 None
ERR9807000 Pre-XDR-TB lineage4.1.1.3 None
SRR29093572 Pre-XDR-TB lineage4.1.1.3 None
SRR16156199 MDR-TB lineage4.1.1.3 None
ERR10748491 Pre-XDR-TB lineage4.1.1.3 None
SRR29093720 Pre-XDR-TB lineage4.1.1.3 None
ERR13289331 Pre-XDR-TB lineage4.1.1.3 None
ERR8025443 Pre-XDR-TB lineage2.2.2;lineage4.1.1.3 None
ERR8025698 Pre-XDR-TB lineage4.1.1.3 None
ERR9806997 Pre-XDR-TB lineage4.1.1.3 None
ERR9807002 Pre-XDR-TB lineage4.1.1.3 None
ERR8025435 Pre-XDR-TB lineage4.1.1.3 None
ERR10748522 MDR-TB lineage4.1.1.3 None
ERR1873418 HR-TB lineage4.1.1.3 None
ERR8025692 Pre-XDR-TB lineage4.1.1.3 None
SRR10869134 Pre-XDR-TB lineage4.1.1.3 None
SRR29096852 Pre-XDR-TB lineage4.1.1.3 None
ERR9806888 Pre-XDR-TB lineage4.1.1.3 None
ERR9993105 XDR-TB lineage4.1.1.3 None
ERR10112837 Pre-XDR-TB lineage4.1.1.3 None
ERR7911610 Pre-XDR-TB lineage4.1.1.3 za
SRR16156687 Pre-XDR-TB lineage4.1.1.3 None
SRR10869214 Pre-XDR-TB lineage4.1.1.3 None
SRR16156756 MDR-TB lineage4.1.1.3 None
ERR10112889 Pre-XDR-TB lineage4.1.1.3 None
ERR4011943 Pre-XDR-TB lineage4.1.1.3 None
SRR10869239 MDR-TB lineage4.1.1.3 None
ERR7911596 Pre-XDR-TB lineage4.1.1.3 za
ERR8975014 Pre-XDR-TB lineage4.1.1.3 None
ERR7911585 Pre-XDR-TB lineage4.1.1.3 za
ERR7911590 Pre-XDR-TB lineage4.1.1.3 za
ERR9806966 Pre-XDR-TB lineage4.1.1.3 None
ERR7911637 Pre-XDR-TB lineage4.1.1.3 za
ERR1873441 Pre-XDR-TB lineage4.1.1.3 za
SRR10869197 Pre-XDR-TB lineage4.1.1.3 None
SRR16156719 Pre-XDR-TB lineage4.1.1.3 None
ERR10748353 XDR-TB lineage4.1.1.3 None
ERR9992839 XDR-TB lineage4.1.1.3 None
ERR1873446 Pre-XDR-TB lineage4.1.1.3 None
ERR8025664 Pre-XDR-TB lineage4.1.1.3 None
ERR9993083 XDR-TB lineage4.1.1.3 None
SRR16156859 Pre-XDR-TB lineage4.1.1.3 None
SRR16156716 Pre-XDR-TB lineage4.1.1.3 None
ERR9993219 Pre-XDR-TB lineage4.1.1.3 None
SRR29055939 MDR-TB lineage4.1.1.3 None
SRR29056305 Pre-XDR-TB lineage4.1.1.3 None
SRR29093458 Pre-XDR-TB lineage4.1.1.3 None
ERR7361986 Pre-XDR-TB lineage4.1.1.3 None
ERR9806876 MDR-TB lineage4.1.1.3 None
ERR13288959 MDR-TB lineage4.1.1.3 None
ERR8975785 Pre-XDR-TB lineage4.1.1.3 None
ERR6362206 MDR-TB lineage4.1.1.3 None
ERR2515546 Pre-XDR-TB lineage4.1.1.3 za
ERR4011941 Pre-XDR-TB lineage4.1.1.3 None
SRR10869234 Pre-XDR-TB lineage4.1.1.3 None
SRR10869284 Pre-XDR-TB lineage4.1.1.3 None
ERR9993031 Pre-XDR-TB lineage4.1.1.3 None
ERR7911675 Pre-XDR-TB lineage4.1.1.3 za
ERR1035037 MDR-TB lineage4.1.1.3 za
ERR9806925 Pre-XDR-TB lineage4.1.1.3 None
ERR9806931 MDR-TB lineage4.1.1.3 None
SRR16156846 Pre-XDR-TB lineage4.1.1.3 None
SRR29093974 Pre-XDR-TB lineage4.1.1.3 None
ERR13285251 Pre-XDR-TB lineage4.1.1.3 None
ERR13288935 XDR-TB lineage4.1.1.3 None
ERR13286205 Pre-XDR-TB lineage4.1.1.3 None
ERR8975725 MDR-TB lineage4.1.1.3 None
ERR9807010 Pre-XDR-TB lineage4.1.1.3 None
ERR10112861 Pre-XDR-TB lineage4.1.1.3 None
ERR8025628 Pre-XDR-TB lineage4.1.1.3 None
SRR29055524 Pre-XDR-TB lineage4.1.1.3 None
ERR9806988 Pre-XDR-TB lineage4.1.1.3 None
ERR9806910 Pre-XDR-TB lineage4.1.1.3 None
SRR10869164 Pre-XDR-TB lineage4.1.1.3 None
ERR10112839 Pre-XDR-TB lineage4.1.1.3 None
ERR9119744 MDR-TB lineage4.1.1.3 None
SRR29056326 Pre-XDR-TB lineage4.1.1.3 None
ERR9992974 XDR-TB lineage4.1.1.3 None
SRR16157097 Pre-XDR-TB lineage4.1.1.3 None
ERR1034641 Pre-XDR-TB lineage4.1.1.3 None
ERR4831557 Pre-XDR-TB lineage4.1.1.3;lineage4.3.2.1 None
ERR9806899 Pre-XDR-TB lineage4.1.1.3 None
ERR4011942 Pre-XDR-TB lineage4.1.1.3 None
ERR10112887 Pre-XDR-TB lineage4.1.1.3 None
SRR29096577 Pre-XDR-TB lineage4.1.1.3 None
ERR9992833 Pre-XDR-TB lineage4.1.1.3 None
SRR10869252 Pre-XDR-TB lineage4.1.1.3 None
ERR9806985 Pre-XDR-TB lineage4.1.1.3 None
SRR29093456 Pre-XDR-TB lineage4.1.1.3 None
SRR29093339 MDR-TB lineage4.1.1.3 None
ERR10748150 Pre-XDR-TB lineage4.1.1.3 None
ERR10748485 XDR-TB lineage4.1.1.3 None