Rv3854c - c.703delT


Drug resistance types
0 Sensitive 1 RR-TB 5 HR-TB 98 MDR-TB 97 Pre-XDR-TB 0 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 193
lineage2.2 4
lineage4.9;lineage2 1
lineage3 1
lineage4;lineage2.2.1 1
lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 201
Geographic prevalence
Country level data for this variant is available for 25 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5863887 MDR-TB lineage2.2.1 None
SRR16088481 Pre-XDR-TB lineage2.2.1 None
ERR5863849 Pre-XDR-TB lineage2.2.1 None
ERR5863886 MDR-TB lineage2.2.1 None
ERR5863888 MDR-TB lineage2.2.1 None
ERR5863892 MDR-TB lineage2.2.1 None
ERR5863884 MDR-TB lineage2.2.1 None
ERR5863889 MDR-TB lineage2.2.1 None
ERR5863898 MDR-TB lineage2.2.1 None
ERR5863885 MDR-TB lineage2.2.1 None
ERR5863893 MDR-TB lineage2.2.1 None
ERR5863901 MDR-TB lineage2.2.1 None
ERR5863896 MDR-TB lineage2.2.1 None
ERR5863894 MDR-TB lineage2.2.1 None
ERR5863895 MDR-TB lineage2.2.1 None
ERR5863890 MDR-TB lineage2.2.1 None
ERR5863891 MDR-TB lineage2.2.1 None
ERR5863904 MDR-TB lineage2.2.1 None
ERR5863908 Pre-XDR-TB lineage2.2.1 None
ERR5863899 MDR-TB lineage2.2.1 None
ERR5863900 MDR-TB lineage2.2.1 None
ERR5863897 MDR-TB lineage2.2.1 None
ERR5863902 MDR-TB lineage2.2.1 None
ERR5863909 Pre-XDR-TB lineage2.2.1 None
ERR5863903 MDR-TB lineage2.2.1 None
ERR5863906 MDR-TB lineage2.2.1 None
ERR5863905 Pre-XDR-TB lineage2.2.1 None
ERR5863907 MDR-TB lineage2.2 None
ERR5864720 Pre-XDR-TB lineage2.2.1 None
ERR5864717 MDR-TB lineage2.2.1 None
ERR5864716 MDR-TB lineage2.2.1 None
ERR5864724 Pre-XDR-TB lineage2.2.1 None
ERR5864719 Pre-XDR-TB lineage2.2.1 None
ERR5864722 Pre-XDR-TB lineage2.2.1 None
ERR5864723 Pre-XDR-TB lineage2.2.1 None
ERR5864721 Pre-XDR-TB lineage2.2.1 None
ERR5864738 MDR-TB lineage2.2.1 None
ERR5864739 MDR-TB lineage2.2.1 None
ERR5864740 MDR-TB lineage2.2.1 None
ERR5864741 MDR-TB lineage2.2.1 None
ERR5864962 Pre-XDR-TB lineage2.2.1 None
ERR5864961 Pre-XDR-TB lineage2.2.1 None
ERR5864718 Pre-XDR-TB lineage2.2.1 None
ERR5864959 Pre-XDR-TB lineage2.2.1 None
ERR5864960 Pre-XDR-TB lineage2.2.1 None
ERR5865270 Pre-XDR-TB lineage2.2.1 None
ERR5865269 Pre-XDR-TB lineage2.2.1 None
ERR5864963 Pre-XDR-TB lineage2.2.1 None
ERR5865353 Pre-XDR-TB lineage2.2.1 None
ERR5865267 Pre-XDR-TB lineage2.2.1 None
ERR5865268 Pre-XDR-TB lineage2.2.1 None
ERR5865756 Pre-XDR-TB lineage2.2.1 None
ERR5865354 Pre-XDR-TB lineage2.2.1 None
ERR5865352 Pre-XDR-TB lineage2.2.1 None
ERR5865755 Pre-XDR-TB lineage2.2.1 None
ERR5866253 MDR-TB lineage2.2.1 None
ERR5865764 MDR-TB lineage2.2.1 None
ERR5865916 Pre-XDR-TB lineage2.2.1 None
ERR5866057 Pre-XDR-TB lineage2.2.1 None
ERR5865765 MDR-TB lineage2.2.1 None
ERR5865889 MDR-TB lineage2.2.1 None
ERR5866056 Pre-XDR-TB lineage2.2.1 None
ERR5866254 MDR-TB lineage2.2.1 None
ERR5866255 MDR-TB lineage2.2.1 None
ERR5866483 Pre-XDR-TB lineage2.2.1 None
ERR5866402 MDR-TB lineage2.2.1 None
ERR5866400 MDR-TB lineage2.2.1 None
ERR5866401 MDR-TB lineage2.2.1 None
SRR11871433 MDR-TB lineage2.2.1 None
ERR8773819 Pre-XDR-TB lineage2.2.1 None
ERR9124971 MDR-TB lineage2.2.1 None
SRR1002680 MDR-TB lineage2.2.1 None
SRR10380021 Pre-XDR-TB lineage2.2.1 None
SRR11033732 Pre-XDR-TB lineage2.2.1 None
SRR1169140 Pre-XDR-TB lineage2.2.1 None
SRR11786860 MDR-TB lineage2.2.1 None
SRR11871411 MDR-TB lineage2.2.1 None
SRR16088502 Pre-XDR-TB lineage2.2.1 None
ERR7911380 MDR-TB lineage2.2.1 None
ERR7911381 MDR-TB lineage2.2.1 None
ERR8773966 MDR-TB lineage2.2.1 None
SRR10379898 Pre-XDR-TB lineage2.2.1 None
SRR10397125 MDR-TB lineage2.2.1 None
SRR10397139 MDR-TB lineage2.2.1 None
SRR11033737 Pre-XDR-TB lineage2.2.1 None
SRR1163178 Pre-XDR-TB lineage2.2.1 None
SRR1163380 Pre-XDR-TB lineage2.2.1 None
SRR1174839 Pre-XDR-TB lineage2.2.1 None
SRR11871417 MDR-TB lineage2.2.1 None
SRR11871435 Pre-XDR-TB lineage2.2.1 None
SRR13068989 RR-TB lineage4.9;lineage2 None
SRR14801476 MDR-TB lineage2.2.1 None
SRR13232625 MDR-TB lineage2.2.1 None
SRR14782156 Pre-XDR-TB lineage2.2.1 None
SRR14802053 Pre-XDR-TB lineage2.2.1 None
SRR16058683 MDR-TB lineage2.2.1 None
SRR14802215 MDR-TB lineage2.2.1 None
SRR14807583 Pre-XDR-TB lineage2.2.1 None
SRR14807559 MDR-TB lineage2.2.1 None
SRR16088475 Pre-XDR-TB lineage2.2.1 None
SRR25206894 Pre-XDR-TB lineage2.2.1 None
SRR18715372 MDR-TB lineage2.2.1 None
SRR24673504 MDR-TB lineage2.2.1 None
SRR25395618 Pre-XDR-TB lineage2.2.1 None
ERR11082120 Pre-XDR-TB lineage2.2.1 None
ERR11067760 Pre-XDR-TB lineage2.2.1 None
ERR11068339 Pre-XDR-TB lineage2.2.1 None
ERR11068479 Pre-XDR-TB lineage2.2.1 None
ERR11081514 Pre-XDR-TB lineage2.2.1 None
ERR11082316 Pre-XDR-TB lineage2.2.1 None
SRR23938662 Pre-XDR-TB lineage2.2.1 None
ERR11082908 Pre-XDR-TB lineage2.2.1 None
ERR1952141 Pre-XDR-TB lineage2.2.1 ie
SRR24256201 MDR-TB lineage2.2.1 None
SRR23938681 Pre-XDR-TB lineage2.2.1 None
ERR11243571 MDR-TB lineage2.2.1 None
SAMN02419679 Pre-XDR-TB lineage2.2.1 by
SRR3743384 Pre-XDR-TB lineage2.2.1 None
ERR4817656 Pre-XDR-TB lineage2.2.1 None
ERR158606 MDR-TB lineage2.2.1 gb
SRR6257087 MDR-TB lineage2.2.1 ru
ERR4818316 HR-TB lineage2.2.1 None
ERR4819090 HR-TB lineage2.2.1 None
SRR5153619 Pre-XDR-TB lineage2.2.1 None
SRR5153262 Pre-XDR-TB lineage2.2.1 None
SRR5153611 Pre-XDR-TB lineage2.2.1 None
SRR5152908 Pre-XDR-TB lineage2.2.1 None
SRR5152921 Pre-XDR-TB lineage2.2.1 None
SRR5153621 Pre-XDR-TB lineage2.2.1 None
ERR7911726 Pre-XDR-TB lineage2.2.1 us
SRR5153864 Pre-XDR-TB lineage2.2.1 None
ERR7911410 MDR-TB lineage2.2.1 us
ERR4827669 MDR-TB lineage2.2.1 None
ERR7910931 MDR-TB lineage2.2.1 md
ERR4820860 HR-TB lineage2.2.1 None
SRR23340044 Pre-XDR-TB lineage2.2 None
SRR5266559 MDR-TB lineage2.2.1 ru
ERR4827590 Pre-XDR-TB lineage2.2.1 None
SRR23310895 MDR-TB lineage2.2 None
SRR23340140 MDR-TB lineage2.2 None
SRR5266535 Pre-XDR-TB lineage2.2.1 ru
ERR4827994 Pre-XDR-TB lineage2.2.1 None
ERR4827479 Pre-XDR-TB lineage2.2.1 None
ERR4828005 Pre-XDR-TB lineage2.2.1 None
ERR108453 Pre-XDR-TB lineage2.2.1 ru
ERR229955 MDR-TB lineage2.2.1 ru
ERR234584 MDR-TB lineage2.2.1 ru
ERR4827948 Pre-XDR-TB lineage2.2.1 None
ERR067588 MDR-TB lineage2.2.1 ru
ERR4827552 Pre-XDR-TB lineage2.2.1 None
SRR606318 MDR-TB lineage2.2.1 None
ERR2517112 Pre-XDR-TB lineage2.2.1 gb
ERR2517033 MDR-TB lineage2.2.1 gb
ERR2516177 MDR-TB lineage2.2.1 be
ERR4830120 MDR-TB lineage2.2.1 None
ERR2516775 MDR-TB lineage2.2.1 gb
ERR2516769 MDR-TB lineage2.2.1 gb
ERR2516396 MDR-TB lineage2.2.1 be
SRR6484920 MDR-TB lineage2.2.1 None
ERR4872349 Pre-XDR-TB lineage2.2.1 None
ERR4822318 MDR-TB lineage2.2.1 de
ERR4872346 MDR-TB lineage2.2.1 None
ERR4822561 Pre-XDR-TB lineage2.2.1 tm
ERR4872274 Pre-XDR-TB lineage2.2.1 None
SRR6807703 MDR-TB lineage2.2.1 None
SRR6832614 MDR-TB lineage2.2.1 None
SRR6832756 MDR-TB lineage2.2.1 None
SRR6832850 MDR-TB lineage2.2.1 None
SRR7516328 Pre-XDR-TB lineage2.2.1 None
ERR2510625 Pre-XDR-TB lineage3 pk
ERR4815753 Pre-XDR-TB lineage2.2.1 gb
ERR3077901 HR-TB lineage2.2.1 None
ERR11049814 MDR-TB lineage2.2.1 None
SRR8365896 MDR-TB lineage2.2.1 None
SRR7516331 Pre-XDR-TB lineage2.2.1 None
SRR7516343 Pre-XDR-TB lineage2.2.1 None
SRR7516388 Pre-XDR-TB lineage4;lineage2.2.1 None
SRR8422493 MDR-TB lineage2.2.1 None
SRR8363837 MDR-TB lineage2.2.1 None
SRR7645825 Pre-XDR-TB lineage2.2.1 None
SRR8422960 MDR-TB lineage2.2.1 None
SRR849475 MDR-TB lineage2.2.1 None
SRR7592381 Pre-XDR-TB lineage4.1.2.1 None
SRR7645800 MDR-TB lineage2.2.1 None
SRR8847006 Pre-XDR-TB lineage2.2.1 None
SRR8847005 Pre-XDR-TB lineage2.2.1 None
SRR8847007 MDR-TB lineage2.2.1 None
ERR11798532 Pre-XDR-TB lineage2.2.1 None
SRR8847011 MDR-TB lineage2.2.1 None
ERR10762279 MDR-TB lineage2.2.1 None
ERR11798531 MDR-TB lineage2.2.1 None
ERR11049098 Pre-XDR-TB lineage2.2.1 None
ERR11044153 MDR-TB lineage2.2.1 None
ERR10762283 MDR-TB lineage2.2.1 None
ERR10762378 Pre-XDR-TB lineage2.2.1 None
ERR2512841 HR-TB lineage2.2.1 gb
ERR11049418 MDR-TB lineage2.2.1 None
ERR3639748 Pre-XDR-TB lineage2.2.1 None
ERR3639776 Pre-XDR-TB lineage2.2.1 None
ERR2513165 Pre-XDR-TB lineage2.2.1 gb
ERR4276897 MDR-TB lineage2.2.1 None