Rv3854c - c.703delT
Drug resistance types
0 Sensitive
1 RR-TB
7 HR-TB
126 MDR-TB
112 Pre-XDR-TB
1 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 247 |
| lineage3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 250 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3743384 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284328 | MDR-TB | lineage2.2.1 | None | ERR5865269 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256201 | MDR-TB | lineage2.2.1 | None | ERR2307527 | MDR-TB | lineage2.2.1 | None | ERR13267517 | Other | lineage2.2.1 | None | ERR4819090 | Other | lineage2.2.1 | None | ERR5863901 | MDR-TB | lineage2.2.1 | None | ERR5866254 | MDR-TB | lineage2.2.1 | None | SRR14782156 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284008 | MDR-TB | lineage2.2.1 | None | ERR4827590 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827669 | MDR-TB | lineage2.2.1 | None | ERR2307623 | HR-TB | lineage2.2.1 | None | ERR11775768 | MDR-TB | lineage2.2.1 | None | SRR29539019 | MDR-TB | lineage2.2.1 | None | SRR29539718 | MDR-TB | lineage2.2.1 | None | SRR14807559 | MDR-TB | lineage2.2.1 | None | SRR8847005 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307611 | MDR-TB | lineage2.2.1 | None | SRR1169140 | Pre-XDR-TB | lineage2.2.1 | None | ERR553236 | MDR-TB | lineage2.2.1 | None | ERR5866401 | MDR-TB | lineage2.2.1 | None | ERR13284110 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863902 | MDR-TB | lineage2.2.1 | None | ERR2516396 | MDR-TB | lineage2.2.1 | be | SRR7516343 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243571 | MDR-TB | lineage2.2.1 | None | ERR5864960 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397125 | MDR-TB | lineage2.2.1 | None | ERR2307743 | MDR-TB | lineage2.2.1 | None | ERR4827948 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888079 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307635 | MDR-TB | lineage2.2.1 | None | ERR4817656 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379898 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516775 | MDR-TB | lineage2.2.1 | gb | ERR11044153 | MDR-TB | lineage2.2.1 | None | ERR5863885 | MDR-TB | lineage2.2.1 | None | ERR5863897 | MDR-TB | lineage2.2.1 | None | ERR5864959 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910931 | MDR-TB | lineage2.2.1 | md | SRR28240014 | MDR-TB | lineage2.2.1 | None | ERR4820860 | HR-TB | lineage2.2.1 | None | SRR7645825 | Pre-XDR-TB | lineage2.2.1 | None | ERR553391 | MDR-TB | lineage2.2.1 | None | ERR5863909 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232625 | MDR-TB | lineage2.2.1 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | SRR18715372 | MDR-TB | lineage2.2.1 | None | ERR1768633 | MDR-TB | lineage2.2.1 | None | ERR5865756 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049098 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863888 | MDR-TB | lineage2.2.1 | None | ERR5863903 | MDR-TB | lineage2.2.1 | None | ERR551833 | MDR-TB | lineage2.2.1 | None | SRR16088502 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864718 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866483 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380021 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049814 | MDR-TB | lineage2.2.1 | None | ERR2516177 | MDR-TB | lineage2.2.1 | be | ERR4817085 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802053 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152921 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516769 | MDR-TB | lineage2.2.1 | gb | ERR5864722 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863892 | MDR-TB | lineage2.2.1 | None | SRR1163380 | Pre-XDR-TB | lineage2.2.1 | None | SRR11786860 | MDR-TB | lineage2.2.1 | None | ERR7911381 | MDR-TB | lineage2.2.1 | None | SRR5266535 | Pre-XDR-TB | lineage2.2.1 | ru | ERR1952141 | Pre-XDR-TB | lineage2.2.1 | ie | ERR8773819 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888086 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510625 | Pre-XDR-TB | lineage3 | pk | ERR3639776 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888062 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863905 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863906 | MDR-TB | lineage2.2.1 | None | ERR5866402 | MDR-TB | lineage2.2.1 | None | ERR7911410 | MDR-TB | lineage2.2.1 | us | ERR13284492 | MDR-TB | lineage2.2.1 | None | ERR13284076 | MDR-TB | lineage2.2.1 | None | ERR5864716 | MDR-TB | lineage2.2.1 | None | SRR10397139 | MDR-TB | lineage2.2.1 | None | ERR13284227 | MDR-TB | lineage2.2.1 | None | SRR14807583 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798532 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798531 | MDR-TB | lineage2.2.1 | None | ERR5864741 | MDR-TB | lineage2.2.1 | None | SRR7516388 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | SRR8847011 | MDR-TB | lineage2.2.1 | None | SRR28888069 | Pre-XDR-TB | lineage2.2.1 | None | SRR606318 | MDR-TB | lineage2.2.1 | None | ERR5863893 | MDR-TB | lineage2.2.1 | None | ERR5864961 | Pre-XDR-TB | lineage2.2.1 | None | SRR8847007 | MDR-TB | lineage2.2.1 | None | ERR5865270 | Pre-XDR-TB | lineage2.2.1 | None | ERR108453 | Pre-XDR-TB | lineage2.2.1 | ru | ERR10762378 | Pre-XDR-TB | lineage2.2.1 | None | ERR551444 | MDR-TB | lineage2.2.1 | None | ERR8773966 | MDR-TB | lineage2.2.1 | None | ERR551453 | MDR-TB | lineage2.2.1 | None | SRR29681259 | MDR-TB | lineage2.2.1 | None | SRR16088475 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082316 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865764 | MDR-TB | lineage2.2.1 | None | ERR5863898 | MDR-TB | lineage2.2.1 | None | SRR5153619 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802215 | MDR-TB | lineage2.2.1 | None | SRR11033732 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307379 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762283 | MDR-TB | lineage2.2.1 | None | SRR14801476 | MDR-TB | lineage2.2.1 | None | ERR13285927 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773766 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827479 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865354 | Pre-XDR-TB | lineage2.2.1 | None | ERR551445 | RR-TB | lineage2.2.1 | None | SRR8363837 | MDR-TB | lineage2.2.1 | None | ERR2307468 | HR-TB | lineage2.2.1 | None | SRR8365896 | MDR-TB | lineage2.2.1 | None | SRR6832614 | MDR-TB | lineage2.2.1 | None | SRR7516331 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310895 | MDR-TB | lineage2.2.1 | None | ERR5864719 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484920 | MDR-TB | lineage2.2.1 | None | SRR7516328 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866056 | Pre-XDR-TB | lineage2.2.1 | None | SRR5266559 | MDR-TB | lineage2.2.1 | ru | SRR28888061 | XDR-TB | lineage2.2.1 | None | ERR4822561 | Pre-XDR-TB | lineage2.2.1 | tm | ERR13289499 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864717 | MDR-TB | lineage2.2.1 | None | ERR4830120 | MDR-TB | lineage2.2.1 | None | ERR13267516 | Other | lineage2.2.1 | None | ERR13285817 | MDR-TB | lineage2.2.1 | None | SRR24673504 | MDR-TB | lineage2.2.1 | None | ERR5865353 | MDR-TB | lineage2.2.1 | None | ERR5863886 | MDR-TB | lineage2.2.1 | None | ERR5863891 | MDR-TB | lineage2.2.1 | None | ERR5865916 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863894 | MDR-TB | lineage2.2.1 | None | ERR7911380 | MDR-TB | lineage2.2.1 | None | SRR5152908 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863908 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864720 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058683 | MDR-TB | lineage2.2.1 | None | SRR16088481 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863884 | MDR-TB | lineage2.2.1 | None | ERR11049418 | MDR-TB | lineage2.2.1 | None | SRR11871433 | MDR-TB | lineage2.2.1 | None | ERR4872346 | MDR-TB | lineage2.2.1 | None | ERR11068479 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866057 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02419679 | Pre-XDR-TB | lineage2.2.1 | by | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR11068339 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307495 | MDR-TB | lineage2.2.1 | None | ERR4818316 | HR-TB | lineage2.2.1 | None | ERR5865765 | MDR-TB | lineage2.2.1 | None | ERR551443 | MDR-TB | lineage2.2.1 | None | SRR7069761 | Pre-XDR-TB | lineage2.2.1 | None | SRR11033737 | Pre-XDR-TB | lineage2.2.1 | None | ERR552936 | MDR-TB | lineage2.2.1 | None | SRR23938662 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863900 | MDR-TB | lineage2.2.1 | None | ERR11082120 | Pre-XDR-TB | lineage2.2.1 | None | SRR28435006 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307533 | MDR-TB | lineage2.2.1 | None | ERR10762279 | MDR-TB | lineage2.2.1 | None | SRR7070209 | HR-TB | lineage2.2.1 | None | SRR11871435 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911726 | Pre-XDR-TB | lineage2.2.1 | us | ERR551037 | MDR-TB | lineage2.2.1 | None | SRR5153864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276897 | MDR-TB | lineage2.2.1 | None | ERR5864963 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285820 | MDR-TB | lineage2.2.1 | None | SRR23938681 | Pre-XDR-TB | lineage2.2.1 | None | SRR8422493 | MDR-TB | lineage2.2.1 | None | SRR1163178 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517112 | Pre-XDR-TB | lineage2.2.1 | gb | ERR5864738 | MDR-TB | lineage2.2.1 | None | ERR5864724 | Pre-XDR-TB | lineage2.2.1 | None | ERR3077901 | HR-TB | lineage2.2.1 | None | SRR29539172 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153611 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340140 | MDR-TB | lineage2.2.1 | None | ERR5863889 | MDR-TB | lineage2.2.1 | None | ERR5864739 | MDR-TB | lineage2.2.1 | None | ERR5866255 | MDR-TB | lineage2.2.1 | None | SRR25395618 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888068 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863899 | MDR-TB | lineage2.2.1 | None | SRR28888087 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807703 | MDR-TB | lineage2.2.1 | None | ERR2307641 | MDR-TB | lineage2.2.1 | None | ERR5865755 | Pre-XDR-TB | lineage2.2.1 | None | ERR067588 | MDR-TB | lineage2.2.1 | ru | ERR4827552 | Pre-XDR-TB | lineage2.2.1 | None | ERR551036 | MDR-TB | lineage2.2.1 | None | ERR5863890 | MDR-TB | lineage2.2.1 | None | ERR5864723 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307528 | MDR-TB | lineage2.2.1 | None | ERR5863907 | MDR-TB | lineage2.2.1 | None | ERR5864721 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174839 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070493 | Pre-XDR-TB | lineage2.2.1 | None | SRR849475 | MDR-TB | lineage2.2.1 | None | ERR11067760 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820004 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153262 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872349 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153621 | Pre-XDR-TB | lineage2.2.1 | None | ERR158606 | MDR-TB | lineage2.2.1 | gb | SRR23340044 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307398 | MDR-TB | lineage2.2.1 | None | ERR2513165 | Pre-XDR-TB | lineage2.2.1 | gb | ERR4828005 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206894 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864740 | MDR-TB | lineage2.2.1 | None | ERR5865352 | Pre-XDR-TB | lineage2.2.1 | None | SRR11871411 | MDR-TB | lineage2.2.1 | None | ERR5863895 | MDR-TB | lineage2.2.1 | None | ERR5865889 | MDR-TB | lineage2.2.1 | None | ERR5863896 | MDR-TB | lineage2.2.1 | None | ERR9124971 | MDR-TB | lineage2.2.1 | None | ERR5865268 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827994 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307604 | MDR-TB | lineage2.2.1 | None | ERR229955 | MDR-TB | lineage2.2.1 | ru | SRR6832850 | MDR-TB | lineage2.2.1 | None | ERR5863887 | MDR-TB | lineage2.2.1 | None | ERR11083035 | Pre-XDR-TB | lineage2.2.1 | None | SRR8422960 | MDR-TB | lineage2.2.1 | None | ERR5866400 | MDR-TB | lineage2.2.1 | None | ERR4872274 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082908 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864962 | Pre-XDR-TB | lineage2.2.1 | None | SRR7592381 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4822318 | MDR-TB | lineage2.2.1 | de | SRR8847006 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832756 | MDR-TB | lineage2.2.1 | None | ERR11081514 | Pre-XDR-TB | lineage2.2.1 | None | ERR234584 | MDR-TB | lineage2.2.1 | ru | SRR6257087 | MDR-TB | lineage2.2.1 | ru | ERR4815753 | Pre-XDR-TB | lineage2.2.1 | gb | ERR5865267 | Pre-XDR-TB | lineage2.2.1 | None |
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