Rv3854c - c.993C>T


Drug resistance types
8 Sensitive 1 RR-TB 1 HR-TB 11 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 1 Other
lineage Counts
lineage Count
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage2.2.1 14
M.canetti;lineage4.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.1.2.1 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 27
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4810868 MDR-TB lineage2.2.1 cn
SRR1723463 Sensitive lineage2.2.1 cn
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4810898 XDR-TB lineage2.2.1 cn
SRR1723464 HR-TB lineage2.2.1 None
SRR25207270 MDR-TB lineage2.2.1 None
SRR25207274 Pre-XDR-TB lineage2.2.1 None
SRR10305640 Sensitive lineage2.2.1 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4814281 Sensitive lineage4.1.2.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR25207273 MDR-TB lineage2.2.1 None
ERR4811079 Sensitive lineage2.2.1 cn
ERR4817271 Sensitive lineage4.1.2.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4810552 Sensitive lineage2.2.1 cn
SRR13423531 Pre-XDR-TB lineage2.2.1 None
SRR28045639 Sensitive lineage2.2.1 None
SRR12062495 Pre-XDR-TB lineage2.2.1 None
SRR10040449 Pre-XDR-TB lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4820838 Sensitive lineage4.1.2.1 None