Rv3862c - c.-81A>T
Drug resistance types
56 Sensitive
7 RR-TB
3 HR-TB
50 MDR-TB
21 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 50 |
| lineage4.3.3 | 28 |
| lineage2.2.1.1 | 4 |
| lineage4.5 | 3 |
| lineage4.8 | 10 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 11 |
| lineage4.6 | 1 |
| lineage4 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.3;lineage4.1.2.1 | 2 |
| lineage4.3.4.1 | 7 |
| lineage3 | 4 |
| lineage4.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.3.2 | 7 |
| lineage4.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 36 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15368859 | Sensitive | lineage2.2.1 | None | SRR14807477 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316509 | Sensitive | lineage2.2.1 | None | SRR12142429 | MDR-TB | lineage2.2.1 | None | SRR16370546 | MDR-TB | lineage2.2.1 | None | SRR16089683 | Sensitive | lineage2.2.1 | None | SRR16370202 | Sensitive | lineage4.3.3 | None | SRR16370280 | MDR-TB | lineage2.2.1.1 | None | SRR16370539 | MDR-TB | lineage2.2.1 | None | SRR19325680 | Sensitive | lineage4.3.3 | None | SRR16370591 | Pre-XDR-TB | lineage4.5 | None | SRR18715111 | Pre-XDR-TB | lineage4.8 | None | SRR18912553 | Sensitive | lineage2.2.1 | None | SRR19226962 | Sensitive | lineage4.3.3 | None | SRR19315458 | Pre-XDR-TB | lineage4.5 | None | SRR25827481 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR21240046 | Sensitive | lineage4.1.2.1 | None | SRR21658527 | Sensitive | lineage2.2.1 | None | SRR21240026 | Sensitive | lineage4.1.2.1 | None | SRR21277370 | Sensitive | lineage4.5 | None | SRR21728158 | Sensitive | lineage4.3.3 | None | SRR21722119 | Sensitive | lineage2.2.1.1 | None | ERR11082970 | Sensitive | lineage4.8 | None | ERR11050961 | Sensitive | lineage4.6 | None | ERR11243480 | Sensitive | lineage4.8 | None | SRR21732980 | Other | lineage4.3.3 | None | ERR11243593 | Sensitive | lineage4.8 | None | SRR21887743 | Pre-XDR-TB | lineage2.2.1 | None | SRR22873605 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251139 | Sensitive | lineage4.8 | None | SRR25534408 | Sensitive | lineage2.2.1 | None | SRR26400043 | MDR-TB | lineage2.2.1.1 | None | SRR25515492 | Sensitive | lineage2.2.1 | None | SRR671856 | Sensitive | lineage2.2.1 | cn | SRR6824612 | MDR-TB | lineage2.2.1 | cn | ERR4813880 | Other | lineage4 | None | ERR8699147 | Sensitive | lineage4.1.1.1 | None | SRR1723715 | Sensitive | lineage2.2.1 | cn | ERR1035190 | Sensitive | lineage4.8 | pt | ERR1034803 | MDR-TB | lineage4.3.3 | pe | ERR1034746 | Sensitive | lineage4.1.2.1 | pe | ERR1034805 | MDR-TB | lineage4.3.3;lineage4.1.2.1 | pe | DRR184666 | Sensitive | lineage4.3.3 | vn | ERR1034804 | MDR-TB | lineage4.3.3 | pe | ERR751614 | MDR-TB | lineage4.3.3 | pe | ERR1193721 | Sensitive | lineage4.3.4.1 | mx | SRR5152915 | Sensitive | lineage4.8 | None | SRR4036025 | MDR-TB | lineage3 | None | ERR779902 | MDR-TB | lineage4.3.3 | pe | ERR7911161 | MDR-TB | lineage2.2.1.1 | vn | ERR775367 | MDR-TB | lineage4.3.3 | pe | ERR2513895 | Sensitive | lineage4.8 | None | ERR751598 | MDR-TB | lineage4.3.3 | pe | SRR5153907 | MDR-TB | lineage4.1 | None | ERR1193687 | Sensitive | lineage4.3.4.1 | sv | ERR7911334 | MDR-TB | lineage2.2.1 | vn | SRR2100861 | Other | lineage3 | None | ERR7911326 | MDR-TB | lineage2.2.1 | vn | ERR270759 | Other | lineage3 | None | ERR751557 | MDR-TB | lineage4.3.3 | pe | ERR2179755 | HR-TB | lineage4.4.2 | cn | ERR4827785 | MDR-TB | lineage2.2.1 | None | ERR2179735 | RR-TB | lineage4.2.2 | cn | SRR5894886 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799150 | HR-TB | lineage3 | in | ERR3148200 | MDR-TB | lineage4.3.4.2 | mx | ERR3148182 | MDR-TB | lineage2.2.1 | mx | SRR6480374 | Sensitive | lineage4.1.2.1 | None | ERR4831414 | MDR-TB | lineage2.2.1 | de | ERR4831131 | Sensitive | lineage4.1.2.1 | de | ERR2516464 | MDR-TB | lineage4.1.2.1 | pe | ERR4813240 | Sensitive | lineage2.2.1 | pe | ERR4799557 | MDR-TB | lineage4.3.3 | in | SRR6896370 | Sensitive | lineage4.9 | None | SRR6896532 | Other | lineage4.9 | None | SRR6832220 | Sensitive | lineage4.8 | None | ERR1203071 | Sensitive | lineage4.8 | None | SRR7276714 | Sensitive | lineage4.3.4.1 | None | ERR4818768 | MDR-TB | lineage4.3.3 | gb | ERR11465210 | Sensitive | lineage4.3.4.1 | None | ERR10748209 | MDR-TB | lineage4.4.1.1 | None | ERR3287434 | MDR-TB | lineage4.3.3 | pe | ERR3132168 | MDR-TB | lineage4.3.2 | None | SRR7276685 | Sensitive | lineage4.3.4.1 | None | ERR10748505 | MDR-TB | lineage2.2.1 | None | ERR1213919 | MDR-TB | lineage4.3 | None | ERR12387300 | RR-TB | lineage4.3.4.1 | None | ERR12117895 | MDR-TB | lineage4.3.3 | None | ERR4024945 | MDR-TB | lineage4.3.3 | None | ERR4024620 | MDR-TB | lineage4.3.3 | None | ERR2515843 | Sensitive | lineage4.9 | za | ERR4024963 | MDR-TB | lineage4.3.3 | None | ERR2515668 | Sensitive | lineage4.9 | za | ERR5864858 | Pre-XDR-TB | lineage2.2.1 | None | ERR228067 | Sensitive | lineage4.4.1.1 | ru | ERR4813812 | Sensitive | lineage4.3.4.1 | br | ERR8699097 | Sensitive | lineage4.3.3 | None | SRR067552 | RR-TB | lineage2.2.1 | None | ERR5864850 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864851 | Pre-XDR-TB | lineage2.2.1 | None | ERR133985 | HR-TB | lineage4.3.3 | ru | ERR8699679 | Sensitive | lineage4.3.3 | None | ERR5864849 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864853 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864852 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864855 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864859 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864854 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864856 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864857 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864860 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358870 | RR-TB | lineage4.6.1.1 | None | ERR6865573 | MDR-TB | lineage4.3.3 | None | ERR6865539 | MDR-TB | lineage4.3.3 | None | ERR6866577 | Sensitive | lineage4.3.2 | None | ERR6865709 | MDR-TB | lineage4.3.3 | None | ERR6866270 | Sensitive | lineage4.1.1 | None | SRR22250208 | Sensitive | lineage2.2.1 | None | ERR6879051 | MDR-TB | lineage4.3.3 | None | ERR6879052 | MDR-TB | lineage4.3.3 | None | ERR6879053 | MDR-TB | lineage4.3.3;lineage4.1.2.1 | None | ERR7361994 | MDR-TB | lineage2.2.1 | None | SRR27241220 | MDR-TB | lineage2.2.1 | None | ERR894428 | Sensitive | lineage4.3.2 | None | ERR7737938 | MDR-TB | lineage2.2.1 | None | ERR11049978 | Sensitive | lineage4.1.2.1 | None | SRR22873609 | Pre-XDR-TB | lineage2.2.1 | None | ERR970451 | RR-TB | lineage4.1.2.1 | None | ERR894427 | Sensitive | lineage4.3.2 | None | ERR894429 | Sensitive | lineage4.3.2 | None | SRR11662436 | MDR-TB | lineage2.2.1 | None | ERR894431 | Sensitive | lineage4.3.2 | None | ERR894430 | Sensitive | lineage4.3.2 | None | ERR972799 | RR-TB | lineage4.1.2.1 | None | ERR970452 | RR-TB | lineage4.1.2.1 | None | SRR069990 | MDR-TB | lineage2.2.1 | None | SRR069980 | MDR-TB | lineage2.2.1 | None | SRR067492 | MDR-TB | lineage2.2.1 | None | SRR10808768 | Sensitive | lineage4.1.2.1 | None | SRR10305778 | Sensitive | lineage2.2.1 | None | SRR070010 | MDR-TB | lineage2.2.1 | None | SRR10305789 | Other | lineage2.2.1 | None | SRR10869156 | MDR-TB | lineage2.2.1 | None |
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