Rv3862c - c.9C>T


Drug resistance types
112 Sensitive 0 RR-TB 19 HR-TB 42 MDR-TB 31 Pre-XDR-TB 2 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.1.2.1 175
lineage4.2.2.2 21
lineage4.1.2.1;lineage4.8 3
lineage2.2.1;lineage4.2.2.2 1
lineage2.2.1;lineage4.1.2.1 8
lineage1.1.2 1
lineage4.1.2.1;lineage4.2.1 2
lineage4.4.1.2 1
lineage1.1.2;lineage4.2.2.2 1
lineage3.1.2.1 2
lineage4.8 1
lineage4.1.2.1;lineage4.3.4.1 1
lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 218
Geographic prevalence
Country level data for this variant is available for 50 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2600455 Sensitive lineage4.1.2.1 None
ERR4831002 Pre-XDR-TB lineage4.2.2.2 np
SRR8380892 MDR-TB lineage4.2.2.2 in
SRR7069957 Sensitive lineage4.1.2.1 None
SRR16088108 Sensitive lineage4.1.2.1;lineage4.8 None
SRR7069045 Sensitive lineage4.1.2.1 None
SRR24673544 Sensitive lineage4.1.2.1 None
ERR4799336 Pre-XDR-TB lineage4.2.2.2 in
SRR1159245 HR-TB lineage4.1.2.1 None
SRR1163416 MDR-TB lineage4.1.2.1 None
SRR21690593 Sensitive lineage4.1.2.1 None
SRR5341261 MDR-TB lineage2.2.1;lineage4.2.2.2 in
SRR14807480 Sensitive lineage4.1.2.1 None
ERR552725 Other lineage4.1.2.1 None
ERR4799476 HR-TB lineage4.2.2.2 in
SRR1163036 MDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR24673526 Sensitive lineage4.1.2.1 None
SRR13232767 MDR-TB lineage4.1.2.1 None
SRR6785425 Sensitive lineage4.1.2.1 None
ERR133818 Sensitive lineage4.1.2.1 ru
SRR14782698 Sensitive lineage4.1.2.1 None
SRR1162997 Pre-XDR-TB lineage4.1.2.1 None
SRR1168976 MDR-TB lineage4.1.2.1 None
SRR25395638 Sensitive lineage4.1.2.1 None
SRR6831783 Sensitive lineage4.1.2.1 None
ERR2600454 Sensitive lineage4.1.2.1 None
ERR11081516 MDR-TB lineage4.1.2.1 None
ERR11043533 Sensitive lineage4.1.2.1 None
SRR3142011 Other lineage4.1.2.1 None
SRR22251196 Sensitive lineage1.1.2 None
SRR6785332 Sensitive lineage4.1.2.1 None
SRR1163446 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR6832074 Sensitive lineage4.1.2.1 None
ERR4831006 Pre-XDR-TB lineage4.2.2.2 np
ERR2514673 Sensitive lineage4.1.2.1 gb
ERR2791542 Sensitive lineage4.1.2.1 None
SRR24673560 Sensitive lineage4.1.2.1 None
SRR14801339 Sensitive lineage4.1.2.1 None
SRR16088453 Sensitive lineage4.1.2.1 None
SRR28240103 Sensitive lineage4.1.2.1 None
ERR2791535 Sensitive lineage4.1.2.1 None
SRR16088584 Pre-XDR-TB lineage4.1.2.1 None
ERR8773978 HR-TB lineage4.1.2.1 None
ERR4827444 MDR-TB lineage4.1.2.1 None
SRR18714819 Sensitive lineage4.1.2.1 None
ERR11049932 Sensitive lineage4.1.2.1 None
ERR2516700 MDR-TB lineage4.1.2.1 nl
SRR15014766 MDR-TB lineage4.1.2.1 None
SRR24673503 Sensitive lineage4.1.2.1 None
ERR108449 Sensitive lineage4.1.2.1 ru
SRR16088594 MDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR2512578 Sensitive lineage4.1.2.1 gb
SRR6356993 Pre-XDR-TB lineage4.1.2.1;lineage4.2.1 None
SRR24709956 MDR-TB lineage4.1.2.1 None
ERR2503501 Sensitive lineage4.1.2.1 fi
SRR14801825 Sensitive lineage4.1.2.1 None
ERR8665924 Pre-XDR-TB lineage4.1.2.1 None
SRR23862124 Sensitive lineage4.1.2.1 None
ERR2503548 Sensitive lineage4.1.2.1 fi
SRR3675497 Other lineage4.1.2.1 None
ERR4796822 Pre-XDR-TB lineage4.2.2.2 in
SRR1162494 HR-TB lineage4.1.2.1 None
ERR11243588 Sensitive lineage4.1.2.1 None
SRR3544738 Sensitive lineage4.1.2.1 None
SRR1172093 MDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR6484943 HR-TB lineage4.1.2.1 None
ERR2516403 MDR-TB lineage4.1.2.1 nl
SRR1169102 Pre-XDR-TB lineage4.1.2.1 None
ERR4820275 HR-TB lineage4.4.1.2 gb
SRR14801923 Sensitive lineage4.1.2.1 None
SRR28706374 MDR-TB lineage4.1.2.1 None
SRR28044944 XDR-TB lineage4.2.2.2 None
SRR1181081 HR-TB lineage4.1.2.1 None
ERR11044636 Sensitive lineage4.1.2.1 None
SRR3142010 Other lineage4.1.2.1 None
SRR6484855 MDR-TB lineage4.1.2.1 None
SRR14782752 Sensitive lineage4.1.2.1 None
ERR4796768 Pre-XDR-TB lineage4.2.2.2 in
SRR14782067 MDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR23340113 Sensitive lineage4.1.2.1 None
SRR5341223 Pre-XDR-TB lineage1.1.2;lineage4.2.2.2 in
ERR4796814 Sensitive lineage3.1.2.1 in
ERR2199888 Sensitive lineage4.1.2.1 de
SRR6832226 Sensitive lineage4.1.2.1 None
SRR6785421 HR-TB lineage4.1.2.1 None
SRR14782208 Sensitive lineage4.1.2.1 None
ERR4830040 Sensitive lineage4.1.2.1 tj
ERR2791555 Sensitive lineage4.1.2.1 None
ERR2503544 Sensitive lineage4.1.2.1 None
SRR1172313 Pre-XDR-TB lineage4.1.2.1 None
ERR4796548 MDR-TB lineage4.2.2.2 in
SRR24673500 Sensitive lineage4.1.2.1 None
ERR4822520 HR-TB lineage4.1.2.1 None
ERR4800015 HR-TB lineage4.2.2.2 in
ERR2791543 Sensitive lineage4.1.2.1 None
ERR4797491 Pre-XDR-TB lineage4.2.2.2 in
SRR11033770 Sensitive lineage4.1.2.1 None
ERR2503564 Sensitive lineage4.1.2.1 fi
SRR16088192 Sensitive lineage4.1.2.1 None
SRR22175173 Pre-XDR-TB lineage4.2.2.2 None
ERR4798135 XDR-TB lineage4.2.2.2 in
SRR1163073 Pre-XDR-TB lineage4.1.2.1 None
SRR5341233 MDR-TB lineage4.2.2.2 in
SRR23861893 Sensitive lineage4.1.2.1 None
ERR551774 Sensitive lineage4.1.2.1 de
ERR11243510 Sensitive lineage4.1.2.1 None
ERR5866492 Pre-XDR-TB lineage4.1.2.1 None
ERR8773555 MDR-TB lineage4.2.2.2 None
SRR23340048 Sensitive lineage4.1.2.1 None
ERR2503546 Sensitive lineage4.1.2.1 fi
ERR5917732 MDR-TB lineage4.1.2.1 by
SRR14801287 Sensitive lineage4.1.2.1 None
ERR2446589 Sensitive lineage4.1.2.1 nl
SRR18714865 Sensitive lineage4.1.2.1 None
ERR5866491 Pre-XDR-TB lineage4.1.2.1 None
SRR1163173 MDR-TB lineage4.1.2.1 None
SRR6256999 MDR-TB lineage4.1.2.1 None
SRR7069816 Sensitive lineage4.1.2.1 None
SRR14782500 Sensitive lineage4.1.2.1;lineage4.8 None
SRR6831859 Sensitive lineage4.1.2.1 None
SRR10525351 MDR-TB lineage4.1.2.1 None
SRR28240212 Sensitive lineage4.1.2.1 None
ERR2503437 Sensitive lineage4.1.2.1 fi
ERR2503404 Sensitive lineage4.1.2.1 None
SRR23862169 Sensitive lineage4.1.2.1 None
SRR23252659 Pre-XDR-TB lineage4.2.2.2 None
SRR28240174 HR-TB lineage4.1.2.1 None
ERR11775701 Sensitive lineage4.1.2.1 None
ERR10465857 Sensitive lineage4.1.2.1 None
SRR6485053 Sensitive lineage4.1.2.1 None
SRR6832274 HR-TB lineage4.1.2.1 None
SRR19276621 Pre-XDR-TB lineage4.8 None
SRR1172440 MDR-TB lineage4.1.2.1 None
ERR2503418 Sensitive lineage4.1.2.1 fi
SRR23310991 Sensitive lineage4.1.2.1;lineage4.3.4.1 None
SRR22249948 Sensitive lineage4.1.2.1 None
ERR11069001 Sensitive lineage4.1.2.1 None
SRR6832559 Sensitive lineage4.1.2.1 None
ERR11068287 Sensitive lineage4.1.2.1 None
ERR2517494 Sensitive lineage4.1.2.1 nl
ERR11049022 Other lineage4.1.2.1 None
SRR14782580 Sensitive lineage4.1.2.1 None
ERR4831158 Other lineage4.1.2.1 de
SRR1172239 Pre-XDR-TB lineage4.1.2.1 None
SRR5153132 Sensitive lineage4.1.2.1 None
SRR14782560 Sensitive lineage4.1.2.1 None
SRR6832727 Sensitive lineage4.1.2.1 None
SRR19303835 Sensitive lineage4.1.2.1 None
SRR1163447 Pre-XDR-TB lineage4.1.2.1 None
SRR6485080 HR-TB lineage4.1.2.1 None
ERR4800217 MDR-TB lineage4.2.2.2 in
ERR5865472 MDR-TB lineage4.1.2.1 None
ERR11082391 MDR-TB lineage4.1.2.1 None
SRR6832255 Sensitive lineage4.1.2.1 None
SRR23862170 Sensitive lineage4.1.2.1 None
SAMN02419677 MDR-TB lineage4.1.2.1 by
SRR6831992 Sensitive lineage4.1.2.1 None
ERR229941 Sensitive lineage4.1.2.1 ru
SRR6832397 Sensitive lineage4.1.2.1 None
ERR3639742 Pre-XDR-TB lineage4.1.2.1 None
ERR5917680 Sensitive lineage4.1.2.1 by
ERR2600611 Other lineage4.1.2.1 None
SRR1163309 Pre-XDR-TB lineage4.1.2.1 None
ERR11050895 Sensitive lineage4.1.2.1 None
SRR24256096 Sensitive lineage4.1.2.1 None
SRR22424814 Other lineage3.1.2.1 None
ERR11082818 Pre-XDR-TB lineage4.1.2.1 None
ERR11049893 Sensitive lineage4.1.2.1 None
SRR6832545 MDR-TB lineage4.1.2.1 None
SRR6356970 Pre-XDR-TB lineage4.1.2.1;lineage4.2.1 None
SRR28239770 HR-TB lineage4.1.2.1 None
SRR18715348 Sensitive lineage4.1.2.1 None
SRR10379888 Sensitive lineage4.1.2.1 None
SRR1181119 HR-TB lineage4.1.2.1 None
SRR6484846 Sensitive lineage4.1.2.1 None
SRR11033733 Sensitive lineage4.1.2.1 None
SRR1169091 MDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR2600526 HR-TB lineage4.1.2.1;lineage4.8 None
ERR2503458 Sensitive lineage4.1.2.1 fi
SAMN02419637 Pre-XDR-TB lineage4.1.2.1 by
SRR14782757 Sensitive lineage4.1.2.1 None
SRR14782414 Sensitive lineage4.1.2.1 None
SRR28239842 Sensitive lineage4.1.2.1 None
SRR6832361 Other lineage4.1.2.1 None
SRR1168963 Pre-XDR-TB lineage4.1.2.1 None
SRR6484935 Sensitive lineage4.1.2.1 None
ERR8773553 MDR-TB lineage4.2.2.2 None
ERR11050946 MDR-TB lineage4.1.2.1 None
ERR4799163 Pre-XDR-TB lineage4.2.2.2 in
SAMN02419594 HR-TB lineage4.1.2.1 by
SRR6785428 Sensitive lineage4.1.2.1 None
ERR4827564 MDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR552726 Other lineage4.1.2.1 None
SAMN02419607 Pre-XDR-TB lineage4.1.2.1 by
ERR4797441 MDR-TB lineage4.2.2.2 in
ERR3275397 Sensitive lineage4.1.2.1 nl
ERR552460 Sensitive lineage4.1.2.1 de
ERR229938 Other lineage4.1.2.1 ru
SRR23862164 Sensitive lineage4.1.2.1 None
ERR11049078 Other lineage4.1.2.1 None
SRR13232753 MDR-TB lineage4.1.2.1 None
ERR8665948 Pre-XDR-TB lineage4.1.2.1 None
SRR23938592 MDR-TB lineage4.1.2.1 None
SRR23340045 Sensitive lineage4.1.2.1 None
SRR25340787 MDR-TB lineage4.2.2.2 None
ERR8665898 MDR-TB lineage4.1.2.1 None
ERR3276053 Sensitive lineage4.1.2.1 nl
SRR18715065 MDR-TB lineage4.1.2.1 None
ERR2514852 Sensitive lineage4.1.2.1 gb
ERR5865473 MDR-TB lineage4.1.2.1 None
ERR11773836 MDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR28351225 Sensitive lineage4.1.2.1 None
ERR11243512 Sensitive lineage4.1.2.1 None
SRR18714940 Sensitive lineage4.1.2.1 None
SRR21689659 HR-TB lineage4.1.2.1 None
SRR28239826 Sensitive lineage4.1.2.1 None
ERR4828903 Sensitive lineage4.4.1.1 None
ERR11049583 HR-TB lineage4.1.2.1 None