Rv3862c - p.Leu52Gln
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
111 Sensitive
3 RR-TB
26 HR-TB
24 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 165 |
| lineage4.3.3;lineage4.8.1 | 2 |
| lineage3.1.1;lineage4.3.3 | 2 |
| lineage4.1.2;lineage4.3.3 | 2 |
| lineage1.1;lineage2.2;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 172 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6479541 | HR-TB | lineage4.3.3 | None | ERR1035331 | Pre-XDR-TB | lineage4.3.3 | br | SRR6964607 | Other | lineage4.3.3 | None | ERR4797451 | MDR-TB | lineage4.3.3 | in | ERR8774336 | MDR-TB | lineage4.3.3 | None | SRR28045161 | Sensitive | lineage4.3.3 | None | ERR9286031 | Sensitive | lineage4.3.3 | None | SAMN02414952 | MDR-TB | lineage4.3.3 | se | ERR386929 | Sensitive | lineage4.3.3 | None | ERR8774337 | MDR-TB | lineage4.3.3 | None | SRR2100283 | MDR-TB | lineage4.3.3 | None | SRR2100951 | Sensitive | lineage4.3.3 | None | SRR2100978 | Sensitive | lineage4.3.3 | None | SRR2101697 | Sensitive | lineage4.3.3;lineage4.8.1 | None | SRR2101780 | Sensitive | lineage4.3.3 | None | ERR7801132 | Sensitive | lineage4.3.3 | None | ERR1035158 | Sensitive | lineage4.3.3 | sa | ERR1035163 | Sensitive | lineage4.3.3 | sa | ERR181710 | HR-TB | lineage4.3.3 | mw | ERR2660544 | Sensitive | lineage4.3.3 | None | ERR7737631 | MDR-TB | lineage4.3.3 | None | ERR2515669 | Sensitive | lineage4.3.3 | za | SRR19428554 | Sensitive | lineage4.3.3 | None | ERR2503488 | Sensitive | lineage4.3.3 | fi | ERR1063877 | Sensitive | lineage4.3.3 | None | SRR21691038 | Sensitive | lineage4.3.3 | None | ERR736854 | Sensitive | lineage4.3.3 | None | SRR1166934 | MDR-TB | lineage4.3.3 | None | SRR14164964 | Sensitive | lineage4.3.3 | None | SRR22048520 | Sensitive | lineage4.3.3 | None | ERR1200627 | Sensitive | lineage4.3.3 | et | ERR13289881 | Sensitive | lineage4.3.3 | None | ERR3275823 | Sensitive | lineage4.3.3 | nl | ERR3276083 | Sensitive | lineage4.3.3 | nl | ERR7801257 | Sensitive | lineage4.3.3 | None | ERR1193652 | HR-TB | lineage4.3.3 | None | SRR19428637 | Sensitive | lineage3.1.1;lineage4.3.3 | None | SRR19428617 | Sensitive | lineage3.1.1;lineage4.3.3 | None | ERR3078004 | MDR-TB | lineage4.3.3 | None | ERR4423494 | MDR-TB | lineage4.3.3 | None | ERR114434 | MDR-TB | lineage4.3.3 | None | ERR047883 | MDR-TB | lineage4.3.3 | None | ERR7821087 | Sensitive | lineage4.3.3 | None | ERR228139 | HR-TB | lineage4.3.3 | None | SRR7069243 | Sensitive | lineage4.3.3 | None | ERR11044356 | Sensitive | lineage4.3.3 | None | SRR10315491 | MDR-TB | lineage4.3.3 | None | ERR7801287 | Sensitive | lineage4.3.3 | None | SRR2100829 | HR-TB | lineage4.3.3 | None | SRR28868395 | Sensitive | lineage4.3.3 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR4820190 | Sensitive | lineage4.3.3 | None | SRR6855840 | Sensitive | lineage4.3.3 | None | SRR21690826 | Sensitive | lineage4.3.3 | None | ERR10969186 | Sensitive | lineage4.3.3 | None | ERR278570 | Sensitive | lineage4.3.3 | None | ERR7801259 | Sensitive | lineage4.3.3 | None | SRR28868469 | Sensitive | lineage4.3.3 | None | ERR9286056 | RR-TB | lineage4.3.3 | None | SRR7517796 | HR-TB | lineage4.3.3 | None | SRR6046197 | Other | lineage4.3.3 | None | SRR29096689 | Sensitive | lineage4.3.3 | None | ERR7821089 | Sensitive | lineage4.3.3 | None | SRR25460167 | Sensitive | lineage4.3.3 | None | ERR4797281 | Sensitive | lineage4.3.3 | in | SRR29356656 | Sensitive | lineage4.3.3 | None | ERR11591436 | Sensitive | lineage4.3.3 | None | ERR8699830 | Sensitive | lineage4.3.3 | None | ERR8774334 | HR-TB | lineage4.3.3 | None | ERR7801291 | Sensitive | lineage4.3.3 | None | ERR4423683 | HR-TB | lineage4.3.3 | None | SAMN03648002 | HR-TB | lineage4.3.3 | None | ERR1193662 | RR-TB | lineage4.3.3 | so | ERR1193668 | Sensitive | lineage4.3.3 | ug | ERR1193695 | Sensitive | lineage4.3.3 | ke | ERR036234 | HR-TB | lineage4.3.3 | mw | ERR1193760 | Sensitive | lineage4.3.3 | ke | ERR4815569 | Other | lineage4.3.3 | gb | ERR4820867 | Sensitive | lineage4.3.3 | gb | ERR4821966 | HR-TB | lineage4.3.3 | gb | ERR2516089 | Sensitive | lineage4.3.3 | za | ERR2515702 | Sensitive | lineage4.3.3 | za | SRR6046237 | Sensitive | lineage4.3.3 | gb | SRR9970988 | MDR-TB | lineage4.3.3 | None | ERR176682 | Sensitive | lineage4.3.3 | mw | ERR182003 | Sensitive | lineage4.3.3 | mw | ERR047881 | MDR-TB | lineage4.3.3 | gb | SRR3085561 | HR-TB | lineage4.3.3 | None | SRR6856022 | Sensitive | lineage4.1.2;lineage4.3.3 | None | SRR6896597 | HR-TB | lineage4.3.3 | None | ERR11043346 | Sensitive | lineage4.3.3 | None | SRR21690856 | Sensitive | lineage4.3.3 | None | SRR25460168 | Sensitive | lineage4.3.3 | None | SRR2467271 | HR-TB | lineage4.3.3 | None | ERR11252522 | Sensitive | lineage4.3.3 | None | SRR7069923 | Sensitive | lineage4.3.3 | None | SRR6855935 | Sensitive | lineage4.3.3 | None | ERR11591444 | Sensitive | lineage4.3.3 | None | ERR4423495 | MDR-TB | lineage4.3.3 | None | ERR8774335 | HR-TB | lineage4.3.3 | None | ERR9285767 | Sensitive | lineage4.3.3 | None | ERR9992743 | MDR-TB | lineage4.3.3 | None | ERR2515504 | HR-TB | lineage4.3.3 | za | ERR9285813 | Sensitive | lineage4.3.3 | None | ERR9285924 | Sensitive | lineage4.3.3 | None | SRR6896501 | HR-TB | lineage4.3.3 | None | ERR11488571 | MDR-TB | lineage4.3.3 | None | SRR25460165 | Sensitive | lineage4.3.3 | None | SRR7069794 | Sensitive | lineage4.3.3 | None | ERR3276207 | Sensitive | lineage4.3.3 | nl | ERR7801135 | HR-TB | lineage4.3.3 | None | ERR3077973 | Sensitive | lineage4.3.3 | None | SRR7517703 | HR-TB | lineage4.3.3 | None | SRR19427024 | Other | lineage4.3.3 | None | SRR6982557 | Sensitive | lineage4.3.3 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR270719 | HR-TB | lineage4.3.3 | None | ERR7801133 | Sensitive | lineage4.3.3 | None | SRR29096540 | Sensitive | lineage4.3.3 | None | ERR212044 | Sensitive | lineage4.3.3 | mw | ERR228263 | Sensitive | lineage4.3.3 | None | ERR386966 | Sensitive | lineage4.3.3 | None | SRR29230895 | Sensitive | lineage4.3.3 | None | SRR5341218 | MDR-TB | lineage4.3.3 | None | ERR4798106 | Pre-XDR-TB | lineage4.3.3 | in | ERR736880 | Sensitive | lineage4.3.3 | None | ERR3078014 | MDR-TB | lineage4.3.3 | None | ERR1063876 | Sensitive | lineage4.3.3 | None | SRR21691092 | Sensitive | lineage4.3.3 | None | SRR6855682 | Sensitive | lineage4.3.3 | None | SRR6982547 | Sensitive | lineage4.3.3;lineage4.8.1 | None | ERR4830553 | MDR-TB | lineage4.3.3 | None | ERR7911449 | MDR-TB | lineage4.3.3 | za | SRR19428600 | Sensitive | lineage4.3.3 | None | ERR230087 | Sensitive | lineage4.3.3 | None | SRR2100617 | Sensitive | lineage4.3.3 | None | ERR4815009 | Sensitive | lineage4.3.3 | gb | ERR4816983 | Sensitive | lineage4.3.3 | gb | ERR4817211 | Sensitive | lineage4.3.3 | gb | ERR2512940 | Sensitive | lineage4.3.3 | gb | ERR2513771 | Sensitive | lineage4.3.3 | gb | ERR2512527 | Sensitive | lineage4.3.3 | gb | ERR2514272 | Sensitive | lineage4.3.3 | gb | ERR2512694 | Sensitive | lineage4.3.3 | gb | ERR2512996 | Sensitive | lineage4.3.3 | gb | ERR2515863 | Sensitive | lineage4.1.2;lineage4.3.3 | za | ERR2515842 | HR-TB | lineage4.3.3 | za | SRR6046105 | Sensitive | lineage4.3.3 | gb | SRR6046509 | Sensitive | lineage4.3.3 | gb | ERR11068269 | Sensitive | lineage4.3.3 | None | ERR7801134 | HR-TB | lineage4.3.3 | None | SRR18213743 | HR-TB | lineage4.3.3 | None | SRR25460166 | Sensitive | lineage4.3.3 | None | SRR1162823 | MDR-TB | lineage4.3.3 | None | ERR3077961 | HR-TB | lineage4.3.3 | None | ERR11049135 | Sensitive | lineage4.3.3 | None | SRR19428523 | HR-TB | lineage1.1;lineage2.2;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | None | ERR10748576 | MDR-TB | lineage4.3.3 | None | ERR2515281 | Sensitive | lineage4.3.3 | None | ERR3077980 | RR-TB | lineage4.3.3 | None | ERR11775901 | Sensitive | lineage4.3.3 | None | ERR4423682 | HR-TB | lineage4.3.3 | None | SRR19304010 | Other | lineage4.3.3 | None | ERR13290162 | Sensitive | lineage4.3.3 | None | ERR13290139 | Sensitive | lineage4.3.3 | None | ERR11466412 | Sensitive | lineage4.3.3 | None | ERR1193641 | Sensitive | lineage4.3.3 | et | ERR4800116 | Pre-XDR-TB | lineage4.3.3 | None | ERR11050385 | Sensitive | lineage4.3.3 | None | SRR6855976 | Sensitive | lineage4.3.3 | None | SRR6855807 | Sensitive | lineage4.3.3 | None | ERR278607 | Sensitive | lineage4.3.3 | None |
|---|
